New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 513536266 (1.120)4 (0.070) 4/244 NT 5.8% coding (1208/1566 nt) PP_4521 aerotaxis receptor
?NC_002947 = 5135384 68 (1.210)coding (1186/1566 nt) PP_4521 aerotaxis receptor

CCACGGCAATCCCGCTCAGCGCCGCCTGCACCGCCTCGACACTGTGCACACTGTCCCGGGAAATCTGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATGGCGGCGTTAAGCGCCAGCAGGTTGGTCTGCTCGGCAATCGAAGTGATCACGTCGACCAC  >  NC_002947/5135216‑5135510
                                                                                                                                                   |                                                                                                                                                      
ccACGGCAATCCCGCTCAGCGCCGCCTGCACCGCCTCGACACTGTGCACACTGTCCCGGGAAATCTGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGAc                                                                                                                                                      >  4:59363/1‑149 (MQ=255)
        aTCCCGCTCAGCGCCGCCTGCACCGCCTCGACACTGTGCACACTGTCCCGGGAAATCTGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGt                                                                                                                                              <  2:125850/149‑1 (MQ=255)
         tCCCGCTCAGCGCCGCCTGCACCGCCTCGACACTGTGCACACTGTCCCGGGAAATCTGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGCGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTa                                                                                                                                             >  4:68762/1‑149 (MQ=255)
                   cgccgcCTGCACCGCCTCGACACTGTGCACACTGTCCCGGGAAATCTGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGcc                                                                                                                                    >  3:222888/1‑148 (MQ=255)
                    gccgccTGCACCGCCTCGACACTGTGCACACTGTCCCGGGAAATCTGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCaa                                                                                                                                  >  7:23726/1‑149 (MQ=255)
                     ccgccTGCACCGCCTCGACACTGTGCACACTGTCCCGGGAAATCTGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAAc                                                                                                                                 <  1:183865‑M2/149‑2 (MQ=255)
                          tGCACCGCCTCGACACTGTGCACACTGTCCCGGGAAATCTGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGttggcgcagcgtacccgcgcgtcgacc                                                                                                                             >  2:189858‑M1/1‑121 (MQ=255)
                            cACCGCCTCGACACTGTGCACACTGTCCCGGGAAATCTGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAAcgaccg                                                                                                                            >  5:31700‑M2/1‑141 (MQ=255)
                             aCCGCCTCGACACTGTGCACACTGTCCCGGGAAATCTGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGttggcgcagcgtacccgcgcgtcgaccgaag                                                                                                                         <  1:189858‑M1/149‑32 (MQ=255)
                             aCCGCCTCGACACTGTGCACACTGTCCCGGGAAATCTGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTTCGCTGCGCACAcgaccgacc                                                                                                                         <  6:264060‑M2/149‑10 (MQ=255)
                             aCCGCCTCGACACTGTGCACACTGTCCCGGGAAATCTGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCAc                                                                                                                        <  4:222888/149‑1 (MQ=255)
                             aCCGCCTCGACACTGTGCACACTGTCCCGGGAAATCTGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCAc                                                                                                                        >  2:198392/1‑149 (MQ=255)
                                  cTCGACACTGTGCACACTGTCCCGGGAAATCTGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCtcat                                                                                                                  <  3:59363/149‑1 (MQ=255)
                                  cTCGACACTGTGCACACTGTCCCGGGAAATCTGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCtca                                                                                                                    >  5:68097/1‑148 (MQ=255)
                                     gACACTGTGCACACTGTCCCGGGAAATCTGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAg                                                                                                               >  7:340705/1‑149 (MQ=255)
                                          tgtgCACACTGTCCCGGGAAATCAGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGccac                                                                                                           >  2:108202/1‑148 (MQ=255)
                                                       ccGGGAAATCTGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGc                                                                                                              <  4:12685/132‑1 (MQ=255)
                                                       ccGGGAAATCTGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGc                                                                                                              >  3:12685/1‑132 (MQ=255)
                                                              aTCTGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTg                                                                                      <  8:23726/149‑1 (MQ=255)
                                                               tCTGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGc                                                                                     >  1:222276/1‑149 (MQ=255)
                                                                   cTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCa                                                                                  <  2:108809/148‑1 (MQ=255)
                                                                    tCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGc                                                                                     <  2:77293/144‑1 (MQ=255)
                                                                    tCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGc                                                                                     >  1:77293/1‑144 (MQ=255)
                                                                      gCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCgg                                                                              >  4:307020/1‑149 (MQ=255)
                                                                      gCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCgg                                                                              <  1:198392/149‑1 (MQ=255)
                                                                      gCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCgg                                                                              <  4:10802/149‑1 (MQ=255)
                                                                       ccccGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGgc                                                                             >  7:79215/1‑149 (MQ=255)
                                                                         ccGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGgcgc                                                                           >  3:213431/1‑149 (MQ=255)
                                                                                gCAGTGTTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGCCCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGcgccgc                                                                    >  7:104070/1‑149 (MQ=255)
                                                                                gCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGcgccgc                                                                    >  7:250048/1‑149 (MQ=255)
                                                                                 cAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGttggcgcagcgtacccgcgcgtcgaccg                                                                                                                            >  8:4130‑M1/1‑66 (MQ=255)
                                                                                 cAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGttggcgcagcgtacccgcgcgtcgaccg                                                                                                                            <  7:4130‑M1/94‑29 (MQ=255)
                                                                                 cAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCt                                                                   >  4:251513/1‑149 (MQ=255)
                                                                                  aGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCtt                                                                  <  5:115946/149‑1 (MQ=255)
                                                                                      ttCACCGCTCGCTCCTCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAAt                                                              <  7:155766/148‑1 (MQ=255)
                                                                                      cTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAAt                                                              >  7:213364/1‑149 (MQ=255)
                                                                                         aCCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCtt                                                                  >  1:97998/1‑142 (MQ=255)
                                                                                         aCCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCtt                                                                  <  2:97998/142‑1 (MQ=255)
                                                                                         aCCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATggc                                                           >  6:20352/1‑149 (MQ=255)
                                                                                         aCCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATggc                                                           >  8:341901/1‑149 (MQ=255)
                                                                                            gctcgctcCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATggcggc                                                        <  6:340888/149‑1 (MQ=255)
                                                                                            gctcgctcCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATggcggc                                                        >  8:78596/1‑149 (MQ=255)
                                                                                             ctcgctcCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATggcgg                                                         <  5:213935/147‑1 (MQ=255)
                                                                                             ctcgctcCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATggcgg                                                         >  6:213935/1‑147 (MQ=255)
                                                                                                gctcCGCCCCGGCCCTCAACGAGGCGATGATATGGGGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCACTCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATGGCGGCGt                                                      <  1:108202/148‑1 (MQ=255)
                                                                                                  tcCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATGGCGGCGTTAAg                                                  >  3:308039/1‑149 (MQ=255)
                                                                                                  tcCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTATTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCAAGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATGGCGGCGTTAAg                                                  >  8:31496/1‑149 (MQ=255)
                                                                                                   ccGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGTCGAACCCGCGTCCTTGCTCACCg                                                                               <  6:262306/119‑1 (MQ=255)
                                                                                                   ccGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCg                                                                               >  5:262306/1‑119 (MQ=255)
                                                                                                    cGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATGGCGGCGTTAAgc                                                 <  2:222276/148‑1 (MQ=255)
                                                                                                     gCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGCACCGCACCTCATCAGCCACCACGGCGaa                                                                                                  <  1:22067/99‑1 (MQ=255)
                                                                                                     gCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGaa                                                                                                  >  2:22067/1‑98 (MQ=255)
                                                                                                     gCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATGGCGGCGTTAAgcgc                                               <  7:341901/149‑1 (MQ=255)
                                                                                                     gCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATGGCGGCGTTAAgcgc                                               <  3:68762/149‑1 (MQ=255)
                                                                                                      ccccGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATGGCGGCGTTAAGCGcc                                              <  3:307020/149‑1 (MQ=255)
                                                                                                          ggCCCTCAACGCGGCGATTATATGGTGTTGCTGTTCGGGCGACGCGGGGGTAGGCTGCGCCATCGACCGCACCTCTTCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATGGCGGCGTTAAGCGCcagca                                          <  2:183865/149‑1 (MQ=37)
                                                                                                               tCAACGAGGCGATGATATGGTGGAATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATGGCGGCGTTAAGCGCCAGCAGGtt                                      >  7:55454/1‑149 (MQ=255)
                                                                                                                  aCGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATGGCGGCGTTAAGCGCCAGCAGGTTGGTc                                  >  3:347212/1‑149 (MQ=255)
                                                                                                                  aCGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATGGCGGCGTTAAGCGCCAGCAGGTTGGTc                                  >  7:283698/1‑149 (MQ=255)
                                                                                                                  aCGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATGGCGGCGTTAAGCGCCAGCAGGTTGGTc                                  >  7:278458/1‑149 (MQ=255)
                                                                                                                         gatgatATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATGGCGGCGTTAAGCGCCAGCAGGTTGGTCTGCTCgg                           >  6:277215/1‑149 (MQ=255)
                                                                                                                                tggtggATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCtcatc                                                                                                                 >  5:70054/1‑56 (MQ=255)
                                                                                                                                tggtggATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCtcatc                                                                                                                 <  6:70054/56‑1 (MQ=255)
                                                                                                                                  gtggATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATGGCGGCGTTAAgc                                                 >  6:322242/1‑118 (MQ=255)
                                                                                                                                  gtggATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATGGCGGCGTTAAgc                                                 <  5:322242/118‑1 (MQ=255)
                                                                                                                                   tggATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATggcggc                                                        >  5:224574/1‑110 (MQ=255)
                                                                                                                                   tggATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATggcggc                                                        <  6:224574/110‑1 (MQ=255)
                                                                                                                                   tggATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATGGCGGCGTTAAGCGCCAGCAGGTTGGTCTGCTCGGCAATCGAAGt                 <  5:264060/149‑1 (MQ=255)
                                                                                                                                   tggATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATGGCGGCGTTAAGCGCCAGCAGGTTGGTCTGCTCGGCAATCGAAGt                 <  3:251513/149‑1 (MQ=255)
                                                                                                                                   tggATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATGGCGGCGTTAAGCGCCAGCAGGTTGGTCTGCTCGGCAATCGAAGt                 >  6:20254/1‑149 (MQ=255)
                                                                                                                                          tctTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATGGCGGCGTTAAGCGCCAGCAGGTTGGTCTGCTCGGCAATCGAAGTGATCAc           >  4:113494/1‑149 (MQ=255)
                                                                                                                                           ggtcgGTCGtgtgcgcagcgaacccgcgcgtcgaccgaagagatccaccatatcatcgcctcgttgagggccggggcggagcgagcggtgagcactgccagccggggcgagcagatttcccgggacagtgtgcacagtgtcgaggcggt            <  6:264060‑M1/147‑141 (MQ=255)
                                                                                                                                           ctTCGGTCGACGCGCGGGTACGCTGCGCCAAcgaccgaagagatccaccatatcatcgcctcgttgagggccggggcggagcgagcggtgagcactgccagccggggcgagcagatttcccgggacagtgtgcacagtgtcgaggcggt            <  1:189858‑M2/149‑119 (MQ=255)
                                                                                                                                              cGGTCGttggcgcagcgtacccgcgcgtcgaccgaagagatccaccatatcatcgcctcgttgagggccggggcggagcgagcggtgagcactgccagccggggcgagcagatttcccgggacagtgtgcacagtgtcgaggcggtg           >  5:31700‑M1/1‑6 (MQ=255)
                                                                                                                                              cGGTCGACGCGCGGGTACGCTGCGCCAAcgaccgaagagatccaccatatcatcgcctcgttgagggccggggcggagcgagcggtgagcactg                                                                >  8:4130‑M2/1‑28 (MQ=255)
                                                                                                                                              cGGTCGACGCGCGGGTACGCTGCGCCAAcgaccgaagagatccaccatatcatcgcctcgttgagggccggggcggagcgagcggtgagcactg                                                                <  7:4130‑M2/94‑67 (MQ=255)
                                                                                                                                              cGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATGGCGGCGTTAAGCGCCAGCAGGTTGGTCTGCTCGGCAATCGAAGTGATc             >  1:186693/1‑143 (MQ=255)
                                                                                                                                              cGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATGGCGGCGTTAAGCGCCAGCAGGTTGGTCTGCTCGGCAATCGAAGTGATc             <  2:186693/143‑1 (MQ=255)
                                                                                                                                              cGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATGGCGGCGTTAAGCGCCAGCAGGTTGGTCTGCTCGGCAATCGAAGTGATCACGt         <  4:213431/147‑1 (MQ=255)
                                                                                                                                               ggTCGACGCGCGGGTACGCTGCGCCAAcgaccgaagagatccaccatatcatcgcctcgttgagggccggggcggagcgagcggtgagcactgccagccggggcgagcagatttcccgggacagtgtgcacagtgtcgaggcggtgca         >  2:189858‑M2/1‑27 (MQ=255)
                                                                                                                                                   gttggcgcagcgtacccgcgcgtcgaccgaagagatccaccatatcatcgcctcgttgagggccggggcggagcgagcggtgagcactgccagccggggcgagcagatttcccgggacagtgtgcacagtgtcgaggcggtgcaggcgg    <  1:183865‑M1/149‑149 (MQ=255)
                                                                                                                                                   gACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATGGCGGCGTTAAGCGCCAGCAGGTTGGTCTGCTCGGCAATCGAAGTGATCACGTCGACcac  <  3:113494/149‑1 (MQ=255)
                                                                                                                                                   gACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATGGCGGCGTTAAGCGCCAGCAGGTTGGTCTGCTCGGCAATCGAAGTGATCACGTCGACca   <  8:118489/148‑1 (MQ=255)
                                                                                                                                                   gACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATGGCGGCGTTAAGCGCCAGCAGGTTGGTCTGCTCGGCAATCGAAGTGATCACGTCGACca   >  7:118489/1‑148 (MQ=255)
                                                                                                                                                   |                                                                                                                                                      
CCACGGCAATCCCGCTCAGCGCCGCCTGCACCGCCTCGACACTGTGCACACTGTCCCGGGAAATCTGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGACGCGCGGGTACGCTGCGCCAACGACCGCACCTCATCAGCCACCACGGCGAACCCGCGTCCTTGCTCACCGGCGCGCGCCGCTTCAATGGCGGCGTTAAGCGCCAGCAGGTTGGTCTGCTCGGCAATCGAAGTGATCACGTCGACCAC  >  NC_002947/5135216‑5135510

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.