| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5265857 | 44 (0.740) | 3 (0.050) | 3/246 | NT | 6.1% | coding (755/2067 nt) | yjiY | putative transporter |
| ? | NC_002947 | = 5265887 | 50 (0.880) | coding (725/2067 nt) | yjiY | putative transporter | |||||
TCAGGATACCGATGGCCAGGCCAAGGATCGTGCCGATCTTGAGGAAGGTCGACAGGTAGTCACGCGGCGCCAGCACCAGCCACACTGGCAGCACGGCGGCGACAAAACCGTAGCCCACCAGCATCCAGGTGATCTG‑CACGCCGGTGAACGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5265705‑5265857‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtgaTCGCTGCGGACCCGGTGTGGGGCCCGGCGTTCACGTTCACCGGCGTGCAGATCACCTGGATGCTGGTGGGCTACGGTTTTGTCGCCGCCGTGCTGCCAGTGTGGCTGGTGCTGGCGCCGCGTGACTACCTGTCGACCTTCCTCAAG < NC_002947/5265887‑5265742 TCAGGATACCGATGGCCAGGCCAAGGATCGTGCCGATCTTGAGGAAGGTCGACAGGTAGTCACGCGGCGCCAGCACCAGCCACACTGGCAGCACGGCGGCGACAAAACCGTAGCCCACCAGCATCCAGGTGATCTG‑CACGCCGGTGAAC < 3:270247/149‑1TCAGGATACCGATGGCCAGGCCAAGGATCGTGCCGATCTTGAGGAAGGTCGACAGGTAGTCACGCGGCGCCAGCACCAGCCACACTGGCAGCACGGCGGCGACAAAACCGTAGCCCACCAGCATCCAGGTGATCTG‑CACGCCGGTGAAC > 5:295100/1‑149 GATACCGATGGCCAGGCCAAGGATCGTGCCGATCTTGAGGAAGGTCGACAGGTAGTCACGCGGCGCCAGCACCAGCCACACTGGCAGCACGGCGGCGACAAAACCGTAGCCCACCAGCATCCAGGTGATCTG‑CACGCCGGTGAACGTG > 7:119129/1‑148 AGGAAGGTCGACAGGTAGTCACGCGGCGCCAGCACCAGCCACACTGGCAGCACGGCGGCGACAAAACCGTAGCCCACCAGCATCCAGGTGATCTGTCACGCCGGTGAACGTGATCGCTGCGGACCCGGTGTGGGGCCCGGCGTTCACGT < 1:99193/149‑1 AAAACCGTAGCCCACCAGCATCCAGGTGATCTG‑CACGCCGGTGAACGTGATCGCTGCGGACCCGGTGTGGGGCCCGGCGTTC < 3:210884/82‑1 AAAACCGTAGCCCACCAGCATCCAGGTGATCTG‑CACGCCGGTGAACGTGATCGCTGCGGACCCGGTGTGGGGCCCGGCGTTC > 4:210884/1‑82 TGATCGCTGCGGACCCGGTGTGGGGCCCGGCGTTCACGTTCACCGGCGTGCAGATCACCTGGATGCTGGTGGGCTACGGTTTTGTCGCCGCCGTGCTGCCAGTGTGGCTGGTGCTGGCGCCGCGTGACTACCTGTCGACCTTCCTCAAG < 5:55467/149‑1 TCAGGATACCGATGGCCAGGCCAAGGATCGTGCCGATCTTGAGGAAGGTCGACAGGTAGTCACGCGGCGCCAGCACCAGCCACACTGGCAGCACGGCGGCGACAAAACCGTAGCCCACCAGCATCCAGGTGATCTG‑CACGCCGGTGAACGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5265705‑5265857‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtgaTCGCTGCGGACCCGGTGTGGGGCCCGGCGTTCACGTTCACCGGCGTGCAGATCACCTGGATGCTGGTGGGCTACGGTTTTGTCGCCGCCGTGCTGCCAGTGTGGCTGGTGCTGGCGCCGCGTGACTACCTGTCGACCTTCCTCAAG < NC_002947/5265887‑5265742 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |