| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5500882 = | 43 (0.730) | 4 (0.070) | 4/246 | NT | 9.0% | coding (348/855 nt) | PP_4834 | SPFH domain‑containing protein |
| ? | NC_002947 | 5500940 = | 40 (0.700) | coding (406/855 nt) | PP_4834 | SPFH domain‑containing protein | |||||
GAGGGTTTGATGTCTTGAATCTCCACCGAGCGCACGGTCACGCCCCAGTCTTCGGTCTGCTCGGACATTGCATCGCGCAGGCGGGCCTTGATCTGCTCGCGGCTGGACAGCGCCTCGTCGAGGTCCATTGCACCGACGATGGCGCGCAGCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5501034‑5500882‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgagCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGACCGAAGACTGGGGCGTGACCGTGCGCTCGGTGGAGATTCAAGACATCAAACCCTCGGAAAACATGCAACTGGCCATGGAACGCCAGGCCGCGGCCGAACGTGAGCGCA > NC_002947/5500940‑5501087 GAGGGTTTGATGTCTTGAATCTCCACCGAGCGCACGGTCACGCCCCAGTCTTCGGTCTGCTCGGACATTGCATCGCGCAGGCGGGCCTTGATCTGCTCGCGGCTGGACAGCGCCTCGTCGAGGTCCATTGCACCGACGATGGCGCGCAG > 3:153362/1‑149 GTTTGATGTCTTGAATCTCCACCGAGCGCACGGTCACGCCCCAGTCTTCGGTCTGCTCGGACATTGCATCGCGCAGGCGGGCCTTGATCTGCTCGCGGCTGGACAGCGCCTCGTCGAGGTCCATTGCACCGACGATGGCGCGCAGCGAG < 6:122023/149‑1 GTTTGATGTCTTGAATCTCCACCGAGCGCACGGTCACGCCCCAGTCTTCGGTCTGCTCGGACATTGCATCGCGCAGGCGGGCCTTGATCTGCTCGCGGCTGGACAGCGCCTCGTCGAGGTCCATTGCACCGACGATGGCGCGCAGCGAG > 8:149776/1‑149 GCTCGCGGCTGGACAGCGCCTCGTCGAGGTCCATTGCACCGACGATGGCGCGCAGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGACCGAAGACTGGGGCGTGACCGTGCGCTCGGTGGAGATTCAAGACATCAAA > 3:166071/1‑149 TCGCGGCTGGACAGCGCCTCGTCGAGGTCCATTGCACCGACGATGGCGCGCAGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGACCGAAGACTGGGGCGTGACCGTGCGCTCGGTGGAGATTCAAGACATCAAACC > 4:19129/1‑149 GGCTGGACAGCGCCTCGTCGAGGTCCATTGCACCGACGATGGCGCGCAGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGACCGAAGACTGGGGCGTGACCGTGCGCTCGGTGGAGATTCAAGACATCAAACCCTCG < 4:166071/149‑1 AGCGCCTCGTCGAGGTCCATTGCACCGACGATGGCGCGCAGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGACCGAAGACTGGGGCGTGACCGTGCGCTCGGTGGAGATTCAAGACATCAAACCCTCGGAAAACAT < 3:19129/149‑1 GCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGACCGAAGACTGGGGCGTGACCGTGCGCTCGGTGGAGATTCAAGACATCAAACCCTCGGAAAACATGCAACTGGCCATGGAACGCCAGGCCGCGGCCGAACGTGAG > 1:370426/1‑149 GCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGACCGAAGACTGGGGCGTGACCGTGCGCTCGGTGGAGATTCAAGACATCAAACCCTCGGAAAACATGCAACTGGCCATGGAACGCCAGGCCGCGGCCGCACGTGAGCGCA > 7:291865/1‑149 GAGGGTTTGATGTCTTGAATCTCCACCGAGCGCACGGTCACGCCCCAGTCTTCGGTCTGCTCGGACATTGCATCGCGCAGGCGGGCCTTGATCTGCTCGCGGCTGGACAGCGCCTCGTCGAGGTCCATTGCACCGACGATGGCGCGCAGCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5501034‑5500882‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgagCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGACCGAAGACTGGGGCGTGACCGTGCGCTCGGTGGAGATTCAAGACATCAAACCCTCGGAAAACATGCAACTGGCCATGGAACGCCAGGCCGCGGCCGAACGTGAGCGCA > NC_002947/5500940‑5501087 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |