New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5500882 =	43 (0.730)	4 (0.070)	4/246	NT	9.0%	coding (348/855 nt)	PP_4834	SPFH domain‑containing protein
	?	NC_002947	5500940 =	40 (0.700)					coding (406/855 nt)	PP_4834	SPFH domain‑containing protein

TCCTCGATGTGCAGCAGCAGGAAATCATCACCAAGGACAACGCGGTAATCGTCGCCAACGCCCTGTGTTTCGCCAAGGTAGTCGACCCGCAGAAAGCCTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGACCGAAGACTGGGGCGTGACCGTGCGCTCGGTGGAGATTCAAGACATCAAAC  >  NC_002947/5500734‑5501030                                                                                                                                                     |                                                                                                                                                     tgcgctcacgtgcggccgcggcctggcgttccatggccagttgcatgttttccgagggtttgatgtcttgaatctccaccgagcgcacggtcacgccccagtcttcggtctgctcggacattgcatcgcgcaggcgggccttgatctgc                                                                                                                                                      >  7:291865‑M1/149‑149 (MQ=255)   cTCGATGTGCAGCAGCAGGAAATCATCACCAAGGACAACGCGGTAATCGTCGCCAACGCCCTGTGTTTCGCCAAGGTAGTCGACCCGCAGAAAGCCTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTc                                                                                                                                                    >  1:156931/1‑149 (MQ=255)     ctcacgttcggccgcggcctggcgttccatggccagttgcatgttttccgagggtttgatgtcttgaatctccaccgagcgcacggtcacgccccagtcttcggtctgctcggacattgcatcgcgcaggcgggccttgatctgCTCGc                                                                                                                                                  >  1:370426‑M1/145‑149 (MQ=255)        tgtgCAGCAGCAGGAAATCATCACCAAGGACAACGCGGTAATCGTCGCCAACGCCCTGTGTTTCGCCAAGGTAGTCGACCCGCAGAAAGCCTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTgc                                                                                                                                               >  4:243128/1‑149 (MQ=255)          tgCAGCAGCAGGAAATCATCACCAAGGACAACGCGGTAATCGTCGCCAACGCCCTGTGTTTCGCCAAGGTAGTCGACCCGCAGAAAGCCTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTgcgc                                                                                                                                             >  5:177411/1‑149 (MQ=255)           gcagcagcaGGAAATCATCACCAAGGACAACGCGGTAATCGTCGCCAACGCCCTGTGTTTCGCCAAGGTAGTCGACCCGCAGAAAGCCTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTgcgcg                                                                                                                                            >  7:332242/1‑149 (MQ=255)                      aaaTCATCACCAAGGACAACGCGGTAATCGTCGCCAACGCCCTGTGTTTCGCCAAGGTAGTCGACCCGCAGAAAGCCTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCgg                                                                                                                                  <  3:243128/148‑1 (MQ=255)                           atcaCCAAGGACAACGCGGTAATCGTCGCCAACGCCCTGTGTTTCTCCAAGGTAGTCGACCCGCAGAAAGCCTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAAt                                                                                                                            <  1:315566/149‑1 (MQ=255)                                cAAGGACAACGCGGTAATCGTCGCCAACGCCCTGTGTTTCGCCAAGGTAGTCGACCCGCAGAAAGCCTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGAcc                                                                                                                       >  2:315433/1‑149 (MQ=255)                                       aaCGCGGTAATCGTCGCCAACGCCCTGTGTTTCGCCAAGGTAGTCGACCCGCAGAAAGCCTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTcgac                                                                                                                  >  2:257648/1‑147 (MQ=255)                                         cgcgGTAATCGTCGCCAACGCCCTGTGTTTCGCCAAGGTAGTCGACCCGCAGAAAGCCTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAgg                                                                                                              <  8:332242/149‑1 (MQ=255)                                             gTAATCGTCGCCAACGCCCTGTGTTTCGCCAAGGTAGTCGACCCGCAGAAAGCCTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTgcgc                                                                                                                                             >  7:185598/1‑114 (MQ=255)                                             gTAATCGTCGCCAACGCCCTGTGTTTCGCCAAGGTAGTCGACCCGCAGAAAGCCTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTgcgc                                                                                                                                             <  8:185598/114‑1 (MQ=255)                                             atgttttccgagggtttgatgtcttgaatctccaccgagcgcacggtcacgccccagtcttcggtctgctcggacattgcatcgcgcaggcgggccttgatctgCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCt                                                                                                          <  3:19129‑M1/45‑1 (MQ=255)                                                 tcgtcgCCAACGCCCTGTGTTTCGCCAAGGTAGTCGACCCGCAGAAAGCCTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCgg                                                                                                                                  <  5:203777/121‑1 (MQ=255)                                                 tcgtcgCCAACGCCCTGTGTTTCGCCAAGGTAGTCGACCCGCAGAAAGCCTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCgg                                                                                                                                  >  6:203777/1‑121 (MQ=255)                                                   gtcgCCAACGCCCTGTGTTTCGCCAAGGTAGTCGACCCGCAGAAAGCCTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAg                                                                                                    >  3:50984/1‑149 (MQ=255)                                                     cgagggtttgatgtcttgaatctccaccgagcgcacggtcacgccccagtcttcggtctgctcggacattgcatcgcgcaggcgggccttgatctgCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGcc                                                                                                  <  4:166071‑M1/53‑1 (MQ=255)                                                        cAACGCCCTGTGTTTCGCCAAGGTAGTCGACCCGCAGAAAGCCTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCcgc                                                                                                >  6:185459/1‑148 (MQ=255)                                                         ggtttgatgtcttgaatctccaccgagcgcacggtcacgccccagtcttcggtctgctcggacattgcatcgcgcaggcgggccttgatctgCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGa                                                                                              >  4:19129‑M1/93‑149 (MQ=255)                                                           tttgatgtcttgaatctccaccgagcgcacggtcacgccccagtcttcggtctgctcggacattgcatcgcgcaggcgggccttgatctgCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGc                                                                                            >  3:166071‑M1/91‑149 (MQ=255)                                                            gCCCTGTGTTTCGCCAAGGTAGTCGACCCGCAGAAAGCCTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCa                                                                                           <  6:177411/149‑1 (MQ=255)                                                             cccTGTGTTTCGCCAAGGTAGTCGACCCGCAGAAAGCCTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAg                                                                                          <  1:257648/149‑1 (MQ=255)                                                              ccTGTGTTTCGCCAAGGTAGTCGACCCGCAGAAAGCCTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAg                                                                                             >  4:153362/1‑145 (MQ=255)                                                               cTGTGTTTCGCCAAGGTAGTCGACCCGCAGAAAGCCTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGAt                                                                                        <  8:142528/149‑1 (MQ=255)                                                                    tttCGCCAAGGTAGTCGACCCGCAGAAAGCCTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAgg                                                                                   <  1:315433/149‑1 (MQ=255)                                                                        gCCAAGGTAGTCGACCCGCAGAAAGCCTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAGGCCCg                                                                               >  3:288135/1‑149 (MQ=255)                                                                              gTAGTCGACCCGCAGAAAGCCTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAGGCCCGCCTgcg                                                                         <  2:307443/149‑1 (MQ=255)                                                                                  tCGACCCGCAGAAAGCCTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGAc                                                                                                                        >  3:83305/1‑98 (MQ=255)                                                                                  tCGACCCGCAGAAAGCCTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGAc                                                                                                                        <  4:83305/98‑1 (MQ=255)                                                                                    gACCCGCAGAAAGCCTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAGGCCCGCCTGCGCGATg                                                                    <  3:339214/148‑1 (MQ=255)                                                                                              aaGCCTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGa                                                          <  4:288135/148‑1 (MQ=255)                                                                                              aaGCCTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAg                                                         <  2:156931/149‑1 (MQ=255)                                                                                                  cTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGa                                                     >  1:227213/1‑149 (MQ=255)                                                                                                        tGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTcc                                                            >  8:120783/1‑136 (MQ=255)                                                                                                        tGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTcc                                                            <  7:120783/136‑1 (MQ=255)                                                                                                              gCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGACCGAAGACTggg                                         >  7:149776/1‑149 (MQ=255)                                                                                                                  gACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGACCGAAGACTGGGGCGt                                     >  5:97861/1‑149 (MQ=255)                                                                                                                   aCTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGACCGAAGACTGGGGCGTg                                    <  2:227213/149‑1 (MQ=255)                                                                                                                    cTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGACCGAAGACTGGGGCGTGa                                   <  5:185459/149‑1 (MQ=255)                                                                                                                     ttCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGACCGAAGACTGGGGCGTGAc                                  >  5:52830/1‑149 (MQ=255)                                                                                                                      tctcGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGACCGAAGACTGGGGCGTGAcc                                 >  3:13477/1‑149 (MQ=255)                                                                                                                      tctcGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGACCGAAGACTGGGGCGTGAcc                                 >  8:205785/1‑149 (MQ=255)                                                                                                                          gTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCACCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGACCGAAGACTGGGGCGTGACCGTgc                             >  2:215559/1‑149 (MQ=255)                                                                                                                               ccGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGACCGAAGACTGGGGCGTGACCGTGCGCTCg                        >  6:79841/1‑149 (MQ=255)                                                                                                                               ccGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGACCGAAGACTGGGGCGTGACCGTGCGCTCg                        <  4:50984/149‑1 (MQ=255)                                                                                                                                  tCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGACCGAAGACTGGGGCGTGACCGTGCGCTCGGTg                     <  5:79841/149‑1 (MQ=255)                                                                                                                                    aCCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGACCGAAGACTGGGGCGTGACCGTGCGCTCGGTg                     >  4:287054/1‑147 (MQ=255)                                                                                                                                     ccAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGACCGAAGACTGGGGCGTGACCGTGCGCTCGGTg                     >  8:40288/1‑146 (MQ=255)                                                                                                                                             aCCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGACCGAAGACTGGGGCGTGACCGTGCGCTCGGTGGAGATTCAAGa          >  5:105913/1‑149 (MQ=255)                                                                                                                                                  gACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGACCGAAGACTGGGGCGTGACCGTGCGCTCGGt                      >  6:331885/1‑132 (MQ=255)                                                                                                                                                  gACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGACCGAAGACTGGGGCGTGACCGTGCGCTCGGt                      <  5:331885/132‑1 (MQ=255)                                                                                                                                                    ccTCGCTGCGCACCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGACCGAAGACTGGGGCGTGACCGTGCGCTCGGTGGAGATTCAAGACATCaaa   <  1:215559/149‑1 (MQ=255)                                                                                                                                                     CTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGACCGAAGACTGGGGCGTGACCGTGCGCTCGGTGGAGATTCAAGACATCAAAc  >  8:149776‑M1/1‑149 (MQ=255)                                                                                                                                                     CTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGACCGAAGACTGGGGCGTGACCGTGCGCTCGGTGGAGATTCAAGACATCAAAc  <  6:122023‑M1/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     TCCTCGATGTGCAGCAGCAGGAAATCATCACCAAGGACAACGCGGTAATCGTCGCCAACGCCCTGTGTTTCGCCAAGGTAGTCGACCCGCAGAAAGCCTCGTATGGTGTGCAGGACTTCTCGTTCGCCGTCACCAGCCTGACCATGACCTCGCTGCGCGCCATCGTCGGTGCAATGGACCTCGACGAGGCGCTGTCCAGCCGCGAGCAGATCAAGGCCCGCCTGCGCGATGCAATGTCCGAGCAGACCGAAGACTGGGGCGTGACCGTGCGCTCGGTGGAGATTCAAGACATCAAAC  >  NC_002947/5500734‑5501030

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.