New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5520635	64 (1.080)	6 (0.110)	5/246	NT	8.4%	coding (681/882 nt)	PP_4853	DMT superfamily permease
	?	NC_002947	= 5520670	70 (1.230)					coding (716/882 nt)	PP_4853	DMT superfamily permease

CGCCAATGCAGCTGCTGTACCTGCAGGTGCTGGTGGCCATCGTCGTGTTGCTGCCGCTGTTCCTGCTGTCAGACAAGACCGGCCTGAACAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGC‑‑‑‑‑TGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5520484‑5520635 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtgCGGCTGGGCCCCAGGCGGTGCACGGCCTGCATCCACACCAGCGGCGCGATCATCGAAGCCAGTACGCAGGCATACAGGACCAGGCCGATGTTGTGGCTGTTCAGGCCGGTCTTGTCTGACAGCAGGAACAGCGGCAGCAACAC  <  NC_002947/5520670‑5520528                                                                                                                                                                                                                                                                                                              CGCCAATGCAGCTGCTGTACCTGCAGGTGCTGGTGGCCATCGTCGTGTTGCTGCCGCTGTTCCTGCTGTCAGACAAGACCGGCCTGAACAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGC‑‑‑‑‑TG                                                                                                                                                    >  2:232127/1‑149   CCAATGCAGCTGCTGTACCTGCAGGTGCTGGTGGCCATCGTCGTGTTGCTGCCGCTGTTCCTGCTGTCAGACAAGACCGGCCTGAACAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGC‑‑‑‑‑TGGT                                                                                                                                                  <  7:97525/149‑1                                                TTGCTGCCGCTGTTCCTGCTGTCAGACAAGACCGGCCTGAACAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGTGCGGCTGGGCCCCAGGCGGTGCACGGCCTGCATCCACAC                                                                                                           <  3:290403/148‑1                                                        GCTGTTCCTGCTGTCAGACAAGACCGGCCTGAACAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGC‑‑‑‑‑TGGTGCGGCTGGGCCCCAGGCGGTGCACGGCCTGCATCCACACCAGCGGC                                                                                                    <  5:202381/142‑1                                                        GCTGTTCCTGCTGTCAGACAAGACCGGCCTGAACAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGC‑‑‑‑‑TGGTGCGGCTGGGCCCCAGGCGGTGCACGGCCTGCATCCACACCAGCGGC                                                                                                    >  6:202381/1‑142                                                               CTGCTGTCAGACAAGACCGGCCTGAACAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGC‑‑‑‑‑TGGTGCGGCTGGGCCCCAGGCGGTGCACGGCCTGCATCCACAC                                                                                                           <  5:371714/128‑1                                                               CTGCTGTCAGACAAGACCGGCCTGAACAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGC‑‑‑‑‑TGGTGCGGCTGGGCCCCAGGCGGTGCACGGCCTGCATCCACAC                                                                                                           >  6:371714/1‑128                                                                                             CACAACATCGGCCTGGTCCTGTATGCCTTCGTAATGGCTTCGATGATCGCGCCGCTGGTGTGGTGCGGCTGGGCCCCAGGCGGTGCACGGCCTGCATCCACA                                                                                                            >  1:187928/1‑102                                                                                                                                                         TGGTGCGGCTGGGCCCCAGGCGGTGCACGGCCTGCATCCACACCAGCGGCGCGATCATCGAAGCCAGTACGCAGGCATACAGGACCAGGCCGATGTTGTGGCTGTTCAGGCCGGTCTTGTCTGACAGCAGGAACAGCGGCAGCAACAC  >  6:46721/1‑148                                                                                                                                                                                                                                                                                                              CGCCAATGCAGCTGCTGTACCTGCAGGTGCTGGTGGCCATCGTCGTGTTGCTGCCGCTGTTCCTGCTGTCAGACAAGACCGGCCTGAACAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGC‑‑‑‑‑TGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5520484‑5520635 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtgCGGCTGGGCCCCAGGCGGTGCACGGCCTGCATCCACACCAGCGGCGCGATCATCGAAGCCAGTACGCAGGCATACAGGACCAGGCCGATGTTGTGGCTGTTCAGGCCGGTCTTGTCTGACAGCAGGAACAGCGGCAGCAACAC  <  NC_002947/5520670‑5520528

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.