New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 552063564 (1.080)6 (0.110) 5/246 NT 8.4% coding (681/882 nt) PP_4853 DMT superfamily permease
?NC_002947 = 5520670 70 (1.230)coding (716/882 nt) PP_4853 DMT superfamily permease

ATCGTCGTGTTGCTGCCGCTGTTCCTGCTGTCAGACAAGACCGGCCTGAACAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGAACAACTGGCCAGTTACCACCTGGTCGGCGGCTTGCTGACCTTGGCCGGCGTAGTGCTGGCCGAACGCTGGACCACGCC  >  NC_002947/5520522‑5520814
                                                                                                                                                    |                                                                                                                                                
aTCGTCGTGTTGCTGCCGCTGTTCCTGCTGTCAGACAAGACCGGCCTGAACAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCg                                                                                                                                                  >  5:132358/1‑149 (MQ=255)
      gtgtTGCTGCCGCTGTTCCTGCTGTCAGACAAGACCGGCCTGAACAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGcacca                                                                                                                                             >  6:46721‑M2/1‑143 (MQ=255)
        gtTGCTGCCGCTGTTCCTGCTGTCAGACAAGACCGGCCTGAACAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCacac                                                                                                                                          >  4:27148/1‑149 (MQ=255)
           gctgcCGCTGTTCCTGCTGTCAGACAAGACCGGCCTGAACAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGt                                                                                                                                       >  5:64961/1‑149 (MQ=255)
            ctgcCGCTGTTCCTGCTGTCAGACAAGACCGGCCTGAACAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGtt                                                                                                                                      <  3:236019/149‑1 (MQ=255)
                       ccTGCTGTCAGACAAGACCGGCCTGAACAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTtg                                                                                                                            <  4:279515/148‑1 (MQ=255)
                        ctgctgTCAGACAAGACCGGCCTGAACAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTtgct                                                                                                                          <  1:61050/149‑1 (MQ=255)
                              tCAGACAAGACCGGCCTGAACAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCt                                                                                                                    >  8:170333/1‑149 (MQ=255)
                                aGACAAGACCGGCCTGAACAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCCCACCACACTGTTCTTCAACTTGCTGCCGCTg                                                                                                                   <  1:232127/148‑1 (MQ=255)
                                    aaGACCGGCCTGAACAGCCACAACATCGGCCAGGTCCTGTATGCCTGCGAACTGGCTTCGATGATCGCGCCGCTGGTGTGGATCCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCAc                                                                                                              >  5:359938/1‑149 (MQ=255)
                                      gACCGGCCTGAACAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACcg                                                                                                            >  6:114330/1‑149 (MQ=255)
                                       aCCGGCCTGAACAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACcgc                                                                                                           <  3:27148/149‑1 (MQ=255)
                                        ccGGCCTGAACAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACcgcg                                                                                                          >  3:213634/1‑149 (MQ=255)
                                         cGGCCTGAACAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCgcgc                                                                                                         <  7:170333/149‑1 (MQ=255)
                                         cGGCCTGAACAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCgcgc                                                                                                         <  6:64961/149‑1 (MQ=255)
                                              tGAACAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGttc                                                                                                                                     >  8:312286/1‑116 (MQ=255)
                                              tGAACAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGttc                                                                                                                                     <  7:312286/116‑1 (MQ=255)
                                               gAACAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATcg                                                                                                   >  2:120464/1‑149 (MQ=255)
                                               gAACAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTACTGCCGCTGGTCACCGCGCTGATcg                                                                                                   >  2:106895/1‑149 (MQ=255)
                                                aaCAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATcgc                                                                                                  >  4:58245/1‑149 (MQ=255)
                                                aaCAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATc                                                                                                    <  4:70520/147‑1 (MQ=255)
                                                aaCAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATc                                                                                                    >  3:70520/1‑147 (MQ=255)
                                                 aCAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATcgcc                                                                                                 >  6:229661/1‑149 (MQ=255)
                                                     ccACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCTCTGGTGTGGATGCAGGCCGTGCAACGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGccgccg                                                                                             >  5:184388/1‑149 (MQ=255)
                                                     ccACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACcgcg                                                                                                          <  6:27022/136‑1 (MQ=255)
                                                     ccACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACcgcg                                                                                                          >  5:27022/1‑136 (MQ=255)
                                                      cacaACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCgt                                                                                            <  6:132358/149‑1 (MQ=255)
                                                      cacaACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCgt                                                                                            >  3:208107/1‑149 (MQ=255)
                                                      cacaACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCgt                                                                                            >  3:213099/1‑149 (MQ=255)
                                                        caacaTCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCgtgg                                                                                          <  5:3884/149‑1 (MQ=255)
                                                           caTCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGc                                                                                       <  5:229661/149‑1 (MQ=255)
                                                                     gTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGaac                                                                              >  8:302790/1‑148 (MQ=255)
                                                                     gTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGaac                                                                              >  5:268887/1‑148 (MQ=255)
                                                                          gTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCATACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTcgac                                                                                  <  1:108976/139‑1 (MQ=255)
                                                                          gTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTcgac                                                                                  >  2:108976/1‑139 (MQ=255)
                                                                             tGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGAACAACTGGcc                                                                      <  2:50525/148‑1 (MQ=255)
                                                                                cTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGAACAACTGGCCAGt                                                                   >  7:238064/1‑148 (MQ=255)
                                                                                cTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGAACAACTGGCCAGt                                                                   >  8:134106/1‑148 (MQ=255)
                                                                                    gTACTGGCTTCGATGATCGCTCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGAGGAACAACTGGCCAGTTacca                                                              <  6:184388/149‑1 (MQ=255)
                                                                                    gTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGAACAACTGGCCAGTTacca                                                              <  4:39434/149‑1 (MQ=255)
                                                                                     tACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCgtg                                                                                           <  3:320611/119‑1 (MQ=255)
                                                                                     tACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCgtg                                                                                           >  4:320611/1‑119 (MQ=255)
                                                                                        tGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTg                                                                                                       <  5:216602/104‑1 (MQ=255)
                                                                                        tGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTg                                                                                                       >  6:216602/1‑104 (MQ=255)
                                                                                        tGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGa                                                                                                      <  4:315024/105‑1 (MQ=255)
                                                                                        tGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGa                                                                                                      >  3:315024/1‑105 (MQ=255)
                                                                                        tGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGAACAACTGGCCa                                                                     >  8:269390/1‑138 (MQ=255)
                                                                                        tGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGAACAACTGGCCa                                                                     <  7:269390/138‑1 (MQ=255)
                                                                                        tGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGAACAACTGGCCAGTTACCACCTg                                                          >  3:300946/1‑149 (MQ=255)
                                                                                          gCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGAACAACTGGCCAGTTACCACCTgg                                                         <  8:238064/148‑1 (MQ=255)
                                                                                          gCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGAACAACTGGCCAGTTACCACCTg                                                          <  6:387503/147‑1 (MQ=255)
                                                                                              cGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCATCTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGAACAACTGGCCAGTTACCACCTGGTcggc                                                    >  7:175454/1‑149 (MQ=255)
                                                                                               gatgatCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGAACAACTGGCCAGTTACCACCTGGTcggcg                                                   <  5:114330/149‑1 (MQ=255)
                                                                                                atgatCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTACTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGAACAACTGGCCAGTTACCACCTGGTcggcgg                                                  <  1:106895/149‑1 (MQ=255)
                                                                                                   atCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGAACAACTGGCCAGTTACCACCTGGTCGGCGGCt                                                <  7:302790/148‑1 (MQ=255)
                                                                                                    tCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGAACAACTGGCCAGTTACCACCTGGTCGGCGGCTTg                                              <  7:70365/149‑1 (MQ=255)
                                                                                                    tCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGCTGCTCGACGAACAACTGGCCAGTTACCACCTGGACGGCGGCtt                                               >  4:4888/1‑148 (MQ=255)
                                                                                                        gccgcTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGcaccagcggcgcgatcatcgaagccagtacgcaggcatacaggaccaggccgatgttgtggctgttcaggccggtcttgtctgacagcaggaacagc                                                 >  6:202381‑M2/1‑45 (MQ=255)
                                                                                                        gccgcTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGcaccagcggcgcgatcatcgaagccagtacgcaggcatacaggaccaggccgatgttgtggctgttcaggccggtcttgtctgacagcaggaacagc                                                 <  5:202381‑M2/142‑98 (MQ=255)
                                                                                                             tGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGAACAACTGGCCAGTTACCACCTGGTCGGCGGCTTGCTGACCTTg                                     >  2:180907/1‑149 (MQ=255)
                                                                                                               gtgtGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGcaccagcggcgcgatcatcgaagccagtacgcaggcatacaggaccaggccgatgttgtggctgttcaggccggtcttgtctgacagcag                                                        <  5:371714‑M2/128‑91 (MQ=255)
                                                                                                               gtgtGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGcaccagcggcgcgatcatcgaagccagtacgcaggcatacaggaccaggccgatgttgtggctgttcaggccggtcttgtctgacagcag                                                        >  6:371714‑M2/1‑38 (MQ=255)
                                                                                                               gtgtGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGcaccacaccagcggcgcgatcatcgaagccagtacgcaggcatacaggaccaggccgatgttgtggctgttcaggccggtcttgtctgacagcaggaacagcggcagcaa                                    <  3:290403‑M2/148‑111 (MQ=255)
                                                                                                                tgtgGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGcaccacaccagcggcgcgatcatcgaagccattacgaaggcatacaggaccaggccgatgttgtg                                                                                 >  1:187928‑M2/1‑37 (MQ=255)
                                                                                                                 gtgGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGaac                                                                              >  1:334327/1‑104 (MQ=255)
                                                                                                                 gtgGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGaac                                                                              <  2:334327/104‑1 (MQ=255)
                                                                                                                    gATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGAACAACTGGCCAGTTACCACCTGGTCGGCGGCTTGCTGACCTTGGCCGGCg                              >  4:104869/1‑149 (MQ=255)
                                                                                                                        cAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGAACAACTGGCCAGTTACCACCTGGTCGGCGGCTTGCTGACCTTGGCCGGCGTAGt                          <  4:213634/149‑1 (MQ=255)
                                                                                                                         aGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTcga                                                                                   >  7:26108/1‑91 (MQ=255)
                                                                                                                         aGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTcga                                                                                   <  8:26108/91‑1 (MQ=255)
                                                                                                                             cGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGAACAACTGGCCAGTTACCACCTGGTCGGCGGCTTGCTGACCTTGGCCGGCGTAGTGCTgg                     <  4:213099/149‑1 (MQ=255)
                                                                                                                             cGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGAACAACTGGCCAGTTACCACCTGGTCGGCGGCTTGCTGACCTTGGCCGGCGTAGTGCTgg                     <  4:208107/149‑1 (MQ=255)
                                                                                                                              gTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGAACAACTGGCCAGTTACCACCTGGTCGGCGGCTTGCTGACCTTGGCCGGCGTAGTGCTGGc                    >  6:133042/1‑149 (MQ=255)
                                                                                                                              gTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGAACAACTGGCCAGTTACCACCTGGTCGGCGGCTTGCTGACCTTGGCCGGCGTAGTGCTGGc                    <  4:300946/149‑1 (MQ=255)
                                                                                                                                gCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGAACAACTGGCCAGTTACCACCTGGTCGGCGGCTTGCTGACCTTGGCCGGCGTAGTGCTGGCCg                  <  8:175454/149‑1 (MQ=255)
                                                                                                                                       cTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGAACAACTGGCCAGTTACCACCTGGTCGGCGGCTTGCTGACCTTGGCCGGCGTAGTGCTGGCCGAACGCTg           <  7:134106/149‑1 (MQ=255)
                                                                                                                                       cTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGAACAACTGGCCAGTTACCACCTGGTCGGCGGCTTGCTGACCTTGGCCGGCGTAGTGCTGGCCGAACGCTg           <  3:104869/149‑1 (MQ=255)
                                                                                                                                          gggCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCAACGCGCTGATCGCCGCCGTGGTGCTCGACGAACAACTGGCCAGTTACCACCTGGTCGGCGGCTTGCTGACCTTGGCCGGCGTAGTGCTGGCCGAACGCTGGa         <  1:180907/148‑1 (MQ=255)
                                                                                                                                            gCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGAACAACTGGCCAGTTACCACCTGGTCGGCGGCTTGCTGACCTTGGCCGGCGTAGTGCTGGCCGAACGCTGGACCa      >  1:50877/1‑149 (MQ=255)
                                                                                                                                                 gCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGAACAACTGGCCAGTTACCACCAGGTCGGCGGCTTGCTGACCTTGGCCGGCGTAGTGCTGGCCGAACGCTGGACCACGcc  >  6:213035/1‑148 (MQ=255)
                                                                                                                                                    |                                                                                                                                                
ATCGTCGTGTTGCTGCCGCTGTTCCTGCTGTCAGACAAGACCGGCCTGAACAGCCACAACATCGGCCTGGTCCTGTATGCCTGCGTACTGGCTTCGATGATCGCGCCGCTGGTGTGGATGCAGGCCGTGCACCGCCTGGGGCCCAGCCGCACCACACTGTTCTTCAACTTGCTGCCGCTGGTCACCGCGCTGATCGCCGCCGTGGTGCTCGACGAACAACTGGCCAGTTACCACCTGGTCGGCGGCTTGCTGACCTTGGCCGGCGTAGTGCTGGCCGAACGCTGGACCACGCC  >  NC_002947/5520522‑5520814

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.