New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5588328 =	82 (1.390)	4 (0.070)	4/242	NT	5.4%	coding (820/1905 nt)	parE	DNA topoisomerase IV subunit B
	?	NC_002947	5588393 =	62 (1.110)					coding (755/1905 nt)	parE	DNA topoisomerase IV subunit B

CTGCGCTCCTACCTGGTCGACTCGGTCAACGAATTCCAGCGCCTGCCCGACGAGCCGTTCTGTGGCAGCCTGGCGGGTAACAAGGAAGCGGTTGACTGGGCTTTGCTGTGGCTGCCCGAAGGCGGCGACAGCATTCAGGAAAGCTACGTCAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5588481‑5588328 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcaaccGCTTCCTTGTTACCCGCCAGGCTGCCACAGAACGGCTCGTCGGGCAGGCGCTGGAATTCGTTGACCGAGTCGACCAGGTAGGAGCGCAGACCATCCTCATAGTGCCATTCCACCTTTTCGCCGCTGGCCTTGTCCTCGAAACTGACCA  >  NC_002947/5588393‑5588540                                                                                                                                                                                                                                                                                                                CTGCGCTCCTACCTGGTCGACTCGGTCCACGAATTCCAGCGCCTGCCCGACGAGCCGTTCTGTGGCAGCCTGGCGGGTAACAAGGAAGCGGTTGACTGGGCTTTGCTGTGGCTGCCCGAAGGCGGCGACAGCATTCAGGAAAGCTACGT                                                                                                                                                           <  3:240827/149‑1     GCTCCTACCTGGTCGACTCGGTCAACGAATTCCAGCGCCTGCCCGACGAGCCGTTCTGTGGCAGCCTGGCGGGTAACAAGGAAGCGGTTGACTGGGCTTTGCTGTGGCTGCCCGAAGGCGGCGACAGCATTCAGGAAAGCTACGTCAAC                                                                                                                                                       <  4:291085/149‑1     GCTCCTACCTGGTCGACTCGGTCAACGAATTCCAGCGCCTGCCCGACGAGCCGTTCTGTGGCAGCCTGGCGGGTAACAAGGAAGCGGTTGACTGGGCTTTGCTGTGGCTGCCCGAAGGCGGCGACAGCATTCAGGAAAGCTACGTCAAC                                                                                                                                                       <  8:230260/149‑1                                              CCCGACGAGCCGTTCTGTGGCAGCCTGGCGGGTAACAAGGAAGCGGTTGACTGGGCTTTGCTGTGGCTGCCCGAAGGCGGCGACAGCATTCAGGAAAGCTACGTCAACC                                                                                                                                                      >  5:240193/1‑109                                              CCCGACGAGCCGTTCTGTGGCAGCCTGGCGGGTAACAAGGAAGCGGTTGACTGGGCTTTGCTGTGGCTGCCCGAAGGCGGCGACAGCATTCAGGAAAGCTACGTCAACC                                                                                                                                                      <  6:240193/109‑1                                                                                   AGGAAGCGGTTGACTGGGCTTTGCTGTGGCTGCCCGAAGGCGGCGACAGCATTCAGGAAAGCTACGTCAACCGCTTCCTTGTTACCCGCCAGGCTGCCACAGAACGGCTCGTCGGGCAGGCGCTGGAATTCGTTGACCGAGTCGACCAG                                                                         >  4:19225/1‑149                                                                                                           TGTGGCTGCCCGAAGGCGGCGACAGCATTCAGGAAAGCTACGTCAACCGCTTCCTTGTTACCCGCCAGGCTGCCACAGAACGGCTCGTCGGGCAGGCGCTGGAATTCGTTGACCGAGTCGACCAGGTAGGAGCGCAGACCATCCTCA                                                   >  1:86114/1‑147                                                                                                                     CGAAGGCGGCGACAGCATTCAGGAAAGCTACGTCAACCGCTTCCTTGTTACCCGCCAGGCTGCCACAGAACGGCTCGTCGGGCAGGCGCTGGAATTCGTTGACCGAGTCGACCAGGTAGGAGCGCAGACCATCCTCATAGTGCCATTCC                                       <  3:19225/149‑1                                                                                                                        AGGCGGCGACAGCATTCAGGAAAGCTACGTCAACCGCTTCCTTGTTACCCGCCAGGCTGCCACAGAACGGCTCGTCGGGCAGGCGCTGGAATTCGTTGACCGAGTCGACCAGGTAGGAGCGCAGACCATCCTCATAGTGCCATTCCACC                                    <  2:86114/149‑1                                                                                                                                                        ACCGCTTCCTTGTTACCCGCCAGGCTGCCACAGAACGGCTCGTCGGGCAGGCGCTGGAATTCGTTGACCGAGTCGACCAGGTAGGAGCGCAGACCATCCTCATAGTGCCATTCCACCTTTTCGCCGCTGGCCTTGTCCTCGAAACTGAC    <  1:73154/149‑1                                                                                                                                                         CCGCTTCCTTGTTACCCGCCAGGCTGCCACAGAACGGCTCGTCGGGCAGGCGCTGGAATTCGTAGACAGAGTCGACCAGGTAGGAGCGCAGACCATCCTCATAGTGCCATTCCACCTTTTCGCCGCTGGCCATGTCCTCGAAACTGAC    >  2:221758/1‑148                                                                                                                                                          CGCTTCCTTGTTACCCGCCAGGCTGCCACAGAACGGCTCGTCGGGCAGGCGCTGGAATTCGTTGACCGAGTCGACCAGGTAGGAGCGCAGACCATCCTCATAGTGCCATTCCACCTTTTCGCCGCTGGCCTTGTCCTCGAAACTGACCA  <  4:240827/149‑1                                                                                                                                                                                                                                                                                                                CTGCGCTCCTACCTGGTCGACTCGGTCAACGAATTCCAGCGCCTGCCCGACGAGCCGTTCTGTGGCAGCCTGGCGGGTAACAAGGAAGCGGTTGACTGGGCTTTGCTGTGGCTGCCCGAAGGCGGCGACAGCATTCAGGAAAGCTACGTCAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5588481‑5588328 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcaaccGCTTCCTTGTTACCCGCCAGGCTGCCACAGAACGGCTCGTCGGGCAGGCGCTGGAATTCGTTGACCGAGTCGACCAGGTAGGAGCGCAGACCATCCTCATAGTGCCATTCCACCTTTTCGCCGCTGGCCTTGTCCTCGAAACTGACCA  >  NC_002947/5588393‑5588540

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.