| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5953185 | 75 (1.270) | 5 (0.090) | 5/240 | NT | 6.5% | intergenic (‑229/‑45) | ppk/PP_5218 | polyphosphate kinase/DedA family protein |
| ? | NC_002947 | = 5953200 | 73 (1.320) | intergenic (‑244/‑30) | ppk/PP_5218 | polyphosphate kinase/DedA family protein | |||||
CGTTAACGCCCTATCATCTATTGAGCGGCAAGATAAGC‑GCTCATTATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5953033‑5953185‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaacgcgcAGCCTACCCCTTCGC‑GCGCGTTCGTGAAAGTGTCCAAATGTGTCTCGACGTGAACATTTCCAGCGCAGACAATGCCACAAGCCACTTGCCACGGCTTGCCCATGTGTGTAACACGGGCGTCATAATGAGCGCTTATCTTGCCGCTCAA < NC_002947/5953200‑5953053 CGTTAACGTCCTATCATCTATTGAGCGGCAAGATAAGC‑GCTCATTATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAAC < 3:226949/149‑1 TTAACGCCCTATCATCTATTGAGCGGCAAGATAAGC‑GCTCATTATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGC < 3:119573/149‑1 TAACGCCCTATCATCTATTGAGCGGCAAGATAAGCGGCTCATTATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGC > 1:248282/1‑149 AAGATAAGC‑GCTCATTATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGCAGCCTACCCCTTCGC‑GCGCGTTCGT < 2:248282/149‑1 TAAGC‑GCTCATTATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGCAGCCTACCCCTTCGC‑GCGCGTTCGTGAAA < 3:64039/149‑1 ACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGCAGCCTACCCCTTCGC‑GCGCGTTC > 5:322063/1‑113 ACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGCAGCCTACCCCTTCGC‑GCGCGTTC < 6:322063/113‑1 ACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCGTGAAAGTGTCCAAATGTGTCTCGACGTGAACATTTCCAGCGCAGACAATGCCACAAGCCACTTGCCACGGCTTGCCCATGTGTGTAACAGGGGCGT > 4:328631/1‑148 ACGCGCAGCCTACCCCTTCGC‑GCGCGTTCGTGAAAGTGTCCAAATGTGTCTCGACGTGAACATTTCCAGCGCAGACAATGCCACAAGCCACTTGCCACGGCTTGCCCATGTGTGTAACACGGGCGTCATAATGAGCGCTTATCTTGCCG < 3:357844/149‑1 CGCAGCCTACCCCTTCGC‑GCGCGTTCGTGAAAGTGTCCAAATGTGTCTCGACGTGAACATTTCCAGCGCAGACAATGCCACAAGCCACTTGCCACGGCTTGCCCATGTGTGTAACACGGGCGTCATAATGAGCGCTTATCTTGCCGCTC < 8:51111/149‑1 CAGCCTACCCCTTCGC‑GCGCGTTCGTGAAAGTGTCCAAATGTGTCTCGACGTGAACATTTCCAGCGCAGACAATGCCACAAGCCACTTGCCACGGCTTGCCCATGTGTGTAACACGGGCGTCATAATGAGCGCTTATCTTGCCGCTCAA > 7:117422/1‑149 CGTTAACGCCCTATCATCTATTGAGCGGCAAGATAAGC‑GCTCATTATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5953033‑5953185‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaacgcgcAGCCTACCCCTTCGC‑GCGCGTTCGTGAAAGTGTCCAAATGTGTCTCGACGTGAACATTTCCAGCGCAGACAATGCCACAAGCCACTTGCCACGGCTTGCCCATGTGTGTAACACGGGCGTCATAATGAGCGCTTATCTTGCCGCTCAA < NC_002947/5953200‑5953053 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |