New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5953185	75 (1.270)	5 (0.090)	5/240	NT	6.5%	intergenic (‑229/‑45)	ppk/PP_5218	polyphosphate kinase/DedA family protein
	?	NC_002947	= 5953200	73 (1.320)					intergenic (‑244/‑30)	ppk/PP_5218	polyphosphate kinase/DedA family protein

GCCCTATCATCTATTGAGCGGCAAGATAAGCGCTCATT‑ATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTGCTTGCGGGATTCCTTGCGTTCC  >  NC_002947/5953040‑5953332                                                                                                                                                   |                                                                                                                                                     gCCCTATCATCTATTGAGCGGCAAGATAAGCGCTCATT‑ATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAAcgcgc‑gc                                                                                                                                                   >  4:138508/1‑148 (MQ=255)         atcTATTGAGCGGCAAGATAAGCGCTCATT‑ATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAgggg                                                                                                                                            >  3:184518/1‑147 (MQ=255)          tcTATTGAGCGGCAAGATAAGCGCTCATTGATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACTAACGCGC‑GCGAAgggg                                                                                                                                            >  1:221637/1‑147 (MQ=255)              ttGAGCGGCAAGATAAGCGCTCATT‑ATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTg                                                                                                                                     >  7:117422‑M2/1‑148 (MQ=255)                gAGCGGCAAGATAAGCGCTCATT‑ATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTgcg                                                                                                                                   <  8:51111‑M2/149‑4 (MQ=255)                   cGGCAAGATAAGCGCTCATT‑ATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTgcgcgt                                                                                                                                <  3:357844‑M2/149‑7 (MQ=255)                       aaGATAAGCGCTCATT‑ATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGCagcctaccccttcgcgcgcgttcgt                                                                                                                             <  2:248282‑M1/149‑26 (MQ=255)                       aaGATAAGCGCTCATT‑ATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCAt                                                                                                                            <  7:51111/149‑1 (MQ=255)                       aaGATAAGCGCTCATT‑ATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCAt                                                                                                                            <  4:184518/149‑1 (MQ=255)                        aGATAAGCGCTCATT‑ATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCAtt                                                                                                                           >  2:229648/1‑149 (MQ=255)                          aTAAGCGCTCATT‑ATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTc                                                                                                                         >  2:218367/1‑149 (MQ=255)                           tAAGCGCTCATT‑ATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGCagcctaccccttcgcgcgcgttcgtgaaa                                                                                                                         <  3:64039‑M1/149‑30 (MQ=255)                            aaGCGCTCATT‑ATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGc                                                                                                                       >  2:75715/1‑149 (MQ=255)                             aGCGCTCATT‑ATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGc                                                                                                                       <  1:218367/148‑1 (MQ=255)                             aGCGCTCATT‑ATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGc                                                                                                                       <  1:229648/148‑1 (MQ=255)                                gcTCATT‑ATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAg                                                                                                                    >  8:33943/1‑148 (MQ=255)                                    aTT‑ATGACGCCCGTGTTACACACATGGGAAAGCCGTGGCAAGTGGCTTGTGGCATTTTCTGCGCTGGAAATGTTCACGTCGAGACAAATTTTGACACTTTCACGAAATCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCAcat                                                                                                               >  4:7438/1‑147 (MQ=255)                                     tt‑ATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCt                                                                                                               >  5:52834/1‑148 (MQ=255)                                        aTGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCa                                                                                                             <  6:156282/148‑1 (MQ=255)                                           aCGCCCCTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGCAGCCTACCCCTTCGCcgcgttcgtgaaagtgtccaaatgtgt                                                                                                            >  4:328631‑M2/1‑121 (MQ=255)                                               ccGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGc                                                                                                     <  2:221637/149‑1 (MQ=255)                                               ccGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGc                                                                                                     >  4:246076/1‑149 (MQ=255)                                               ccGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGc                                                                                                     <  5:38356/149‑1 (MQ=255)                                                 gtgtTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCtt                                                                                                   <  3:7438/149‑1 (MQ=255)                                                 gtgtTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCtt                                                                                                   <  7:33943/149‑1 (MQ=255)                                                 gtgtTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCtt                                                                                                   <  3:246076/149‑1 (MQ=255)                                                  tgtTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTc                                                                                                  <  6:370025/149‑1 (MQ=255)                                                        acacaTGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAAt                                                                                            >  4:131683/1‑149 (MQ=255)                                                        acacaTGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAAt                                                                                            <  7:184240/149‑1 (MQ=255)                                                          acaTGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGCagcctaccccttcgcgcgcgttc                                                                                                                               <  6:322063‑M1/113‑24 (MQ=255)                                                          acaTGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGCagcctaccccttcgcgcgcgttc                                                                                                                               >  5:322063‑M1/1‑90 (MQ=255)                                                          acaTGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAgg                                                                                                                                        >  1:223245/1‑103 (MQ=255)                                                          acaTGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAgg                                                                                                                                        <  2:223245/103‑1 (MQ=255)                                                          acaTGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTc                                                                                          <  3:131683/149‑1 (MQ=255)                                                          acaTGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTc                                                                                          >  8:33146/1‑149 (MQ=255)                                                                 cAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAg                                                                                    >  1:114839/1‑148 (MQ=255)                                                                 cAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAg                                                                                    >  2:366122/1‑148 (MQ=255)                                                                  aaGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGa                                                                                  >  2:276023/1‑149 (MQ=255)                                                                   aGCCGTGGCAAGTGGCGTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGAt                                                                                 <  8:195550/149‑1 (MQ=255)                                                                    gCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGAtt                                                                                >  5:62487/1‑149 (MQ=255)                                                                    gCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGAtt                                                                                >  8:1269/1‑149 (MQ=255)                                                                         ggCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCa                                                                                     >  6:16990/1‑139 (MQ=255)                                                                         ggCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCa                                                                                     <  5:16990/139‑1 (MQ=255)                                                                          tctaGTGGCTTGTGGATTTTTCTGCGCTGGAATTGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGGGCGTTCATTTATCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCg                                                                             <  4:342270/143‑1 (MQ=255)                                                                            aaGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGc                                                                                                                   <  6:232849/106‑1 (MQ=255)                                                                            aaGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGc                                                                                                                   >  5:232849/1‑106 (MQ=255)                                                                              gTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTTGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACtt                                                                      <  3:329316/149‑1 (MQ=255)                                                                              gTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCggagatcg                                                                      >  3:342270/1‑143 (MQ=255)                                                                                 gCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGc                                                                   <  6:52834/149‑1 (MQ=255)                                                                                   ttGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAg                                                                                    <  7:182017/130‑1 (MQ=255)                                                                                   ttGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAg                                                                                    >  8:182017/1‑130 (MQ=255)                                                                                        gCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCttttt                                                            <  2:114839/149‑1 (MQ=255)                                                                                        gCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCttttt                                                            <  1:75715/149‑1 (MQ=255)                                                                                         cATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTc                                                           >  6:135597/1‑149 (MQ=255)                                                                                          aTTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCt                                                          <  3:138508/149‑1 (MQ=255)                                                                                              tCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCttttt                                                            <  7:191386/143‑1 (MQ=255)                                                                                              tCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCttttt                                                            >  8:191386/1‑143 (MQ=255)                                                                                                      ggAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACcttctt                                              >  4:228800/1‑149 (MQ=255)                                                                                                       gAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCttt                                             >  5:55915/1‑149 (MQ=255)                                                                                                             ttCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCttttt                                                            <  7:114072/128‑1 (MQ=255)                                                                                                             ttCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAgg                                        <  1:366122/148‑1 (MQ=255)                                                                                                             ttCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGc                                       <  4:357844/149‑1 (MQ=255)                                                                                                             ttCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGc                                       >  4:334296/1‑149 (MQ=255)                                                                                                              tCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAg                                         >  4:50946/1‑146 (MQ=255)                                                                                                                aCGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTg                                            <  6:85555/141‑1 (MQ=255)                                                                                                                aCGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTg                                            >  5:85555/1‑141 (MQ=255)                                                                                                                  gTCGATACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGTGTAGTCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGAc                                  <  7:339564/149‑1 (MQ=255)                                                                                                                  gTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTg                                                                                       <  6:35460/96‑1 (MQ=255)                                                                                                                     gagaCACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTg                                            <  4:242696/136‑1 (MQ=255)                                                                                                                     gagaCACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTg                                            >  3:242696/1‑136 (MQ=255)                                                                                                                        acacATTTGGACACTTTCACGAACGCGCgcgaaggggtaggctgcgcgttcgtgaaagtgtccaaatgtgtctcgacgtgaacatttccagcgcagacaatgccacaagccacttgccacggcttgcccatgtgtgtaacaggggcgt                              >  4:328631‑M1/1‑28 (MQ=255)                                                                                                                          acaTTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGc                                                                           >  2:228871/1‑100 (MQ=255)                                                                                                                          acaTTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGc                                                                           <  1:228871/100‑1 (MQ=255)                                                                                                                            aTTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTg                        >  3:123901/1‑149 (MQ=255)                                                                                                                             tttGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTGc                       >  4:172062/1‑149 (MQ=255)                                                                                                                                 gACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTGCTTGc                   >  4:75509/1‑149 (MQ=255)                                                                                                                                  acacTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTGCTTGCg                  >  8:146776/1‑149 (MQ=255)                                                                                                                                      tttCACGAACGCGC‑GCGAAGGGGTAGGCTgcgcgttcgtgaaagtgtccaaatgtgtctcgacgtgaacatttccagcgcagacaatgccacaagccacttgccacggcttgcccatgtgtgtaacacgggcgtcataatgagcgctta              <  3:64039‑M2/149‑121 (MQ=255)                                                                                                                                      tttCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTGCTTGCGGGAt              >  5:243517/1‑149 (MQ=255)                                                                                                                                          aCGAACGCGC‑GCGAAGGGGTAGGCTgcgcgttcgtgaaagtgtccaaatgtgtctcgacgtgaacatttccagcgcagacaatgccacaagccacttgccacggcttgcccatgtgtgtaacacgggcgtcataatgagcgcttatctt          <  2:248282‑M2/149‑125 (MQ=255)                                                                                                                                           cGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTGCTTGCGGGATTCCtt         <  5:135597/149‑1 (MQ=255)                                                                                                                                           cGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTGCTTGCGGGATTCCtt         <  7:146776/149‑1 (MQ=255)                                                                                                                                           cGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGCCACCTTCTTTGAAGGCGAGACCATTCTGGTGCTTGCGGGATTCCtt         <  1:276023/149‑1 (MQ=255)                                                                                                                                            gAACGCGC‑GCGAAGGGGTAGGCTgcgcgttcgtgaaagtgtccaaatgtgtctcgacgtgaacatttccagcgcagacaatgccacaagccacttgccacggcttgcccatgt                                            >  5:322063‑M2/1‑23 (MQ=255)                                                                                                                                            gAACGCGC‑GCGAAGGGGTAGGCTgcgcgttcgtgaaagtgtccaaatgtgtctcgacgtgaacatttccagcgcagacaatgccacaagccacttgccacggcttgcccatgt                                            <  6:322063‑M2/113‑91 (MQ=255)                                                                                                                                            gAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTa                                                         >  5:253999/1‑100 (MQ=255)                                                                                                                                            gAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTa                                                         <  6:253999/100‑1 (MQ=255)                                                                                                                                            gAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTGCTTGCGGGATTCCTTg        >  5:36345/1‑149 (MQ=255)                                                                                                                                            gAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTGCTTGCGGGATTCCTTg        <  4:341817/149‑1 (MQ=255)                                                                                                                                              aCGCGCagcctaccccttcgcgcgcgttcgtgaaagtgtccaaatgtgtctcgacgtgaacatttccagcgcagacaatgccacaagccacttgccacggcttgcccatgtgtgtaacacgggcgtcataatgagcgcttatcttgccg       <  3:357844‑M1/149‑144 (MQ=255)                                                                                                                                                gcgc‑gcgAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGt                         <  6:141648/128‑1 (MQ=255)                                                                                                                                                 cgcagcctaccccttcgcgcgcgttcgtgaaagtgtccaaatgtgtctcgacgtgaacatttccagcgcagacaatgccacaagccacttgccacggcttgcccatgtgtgtaacacgggcgtcataatgagcgcttatcttgccgctc    <  8:51111‑M1/149‑147 (MQ=255)                                                                                                                                                  gc‑gcgAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTgg                          <  2:288522/125‑1 (MQ=255)                                                                                                                                                  gc‑gcgAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTgg                          >  1:288522/1‑125 (MQ=255)                                                                                                                                                  gc‑gcgAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTAGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTGCTTGCGGGATTCCTTGCGTTc   >  5:361558/1‑148 (MQ=255)                                                                                                                                                  gc‑gcgAAGGGGTAGGCTGCGCGTTAATTTCTCCAGCAACTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGTCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTGCTTGCGGGATTCCTTGCGtt    <  6:361558/147‑1 (MQ=255)                                                                                                                                                   cagcctaccccttcgcgcgcgttcgtgaaagtgtccaaatgtgtctcgacgtgaacatttccagcgcagacaatgccacaagccacttgccacggcttgcccatgtgtgtaacacgggcgtcataatgagcgcttatcttgccgctcaa  >  7:117422‑M1/1‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                     GCCCTATCATCTATTGAGCGGCAAGATAAGCGCTCATT‑ATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTGCTTGCGGGATTCCTTGCGTTCC  >  NC_002947/5953040‑5953332

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.