New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5953185	75 (1.270)	5 (0.090)	5/240	NT	6.5%	intergenic (‑229/‑45)	ppk/PP_5218	polyphosphate kinase/DedA family protein
	?	NC_002947	= 5953200	73 (1.320)					intergenic (‑244/‑30)	ppk/PP_5218	polyphosphate kinase/DedA family protein

TTGAGCGGCAAGATAAGCGCTCATTATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTGCTTGCGGGATTCCTTGCGTTCCGCGGTTACATGGATA  >  NC_002947/5953053‑5953347                                                                                                                                                     |                                                                                                                                                    ttGAGCGGCAAGATAAGCGCTCATTATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTg                                                                                                                                                    >  7:117422‑M2/1‑148 (MQ=255)   gAGCGGCAAGATAAGCGCTCATTATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTgcg                                                                                                                                                  <  8:51111‑M2/149‑4 (MQ=255)      cGGCAAGATAAGCGCTCATTATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTgcgcgt                                                                                                                                               <  3:357844‑M2/149‑7 (MQ=255)          aaGATAAGCGCTCATTATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCAt                                                                                                                                           <  7:51111/149‑1 (MQ=255)          aaGATAAGCGCTCATTATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCAt                                                                                                                                           <  4:184518/149‑1 (MQ=255)           aGATAAGCGCTCATTATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCAtt                                                                                                                                          >  2:229648/1‑149 (MQ=255)             aTAAGCGCTCATTATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTc                                                                                                                                        >  2:218367/1‑149 (MQ=255)               aaGCGCTCATTATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGc                                                                                                                                      >  2:75715/1‑149 (MQ=255)                aGCGCTCATTATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGc                                                                                                                                      <  1:218367/148‑1 (MQ=255)                aGCGCTCATTATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGc                                                                                                                                      <  1:229648/148‑1 (MQ=255)                   gcTCATTATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAg                                                                                                                                   >  8:33943/1‑148 (MQ=255)                       aTTATGACGCCCGTGTTACACACATGGGAAAGCCGTGGCAAGTGGCTTGTGGCATTTTCTGCGCTGGAAATGTTCACGTCGAGACAAATTTTGACACTTTCACGAAATCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCAcat                                                                                                                              >  4:7438/1‑147 (MQ=255)                        ttATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCt                                                                                                                              >  5:52834/1‑148 (MQ=255)                          aTGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCa                                                                                                                            <  6:156282/148‑1 (MQ=255)                             aCGCCCCTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGCAGCCTACCCCTTCGCcgcgttcgtgaaagtgtccaaatgtgt                                                                                                                           >  4:328631‑M2/1‑121 (MQ=255)                                 ccGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGc                                                                                                                    <  5:38356/149‑1 (MQ=255)                                 ccGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGc                                                                                                                    >  4:246076/1‑149 (MQ=255)                                 ccGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGc                                                                                                                    <  2:221637/149‑1 (MQ=255)                                   gtgtTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCtt                                                                                                                  <  7:33943/149‑1 (MQ=255)                                   gtgtTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCtt                                                                                                                  <  3:246076/149‑1 (MQ=255)                                   gtgtTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCtt                                                                                                                  <  3:7438/149‑1 (MQ=255)                                    tgtTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTc                                                                                                                 <  6:370025/149‑1 (MQ=255)                                          acacaTGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAAt                                                                                                           <  7:184240/149‑1 (MQ=255)                                          acacaTGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAAt                                                                                                           >  4:131683/1‑149 (MQ=255)                                            acaTGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTc                                                                                                         >  8:33146/1‑149 (MQ=255)                                            acaTGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTc                                                                                                         <  3:131683/149‑1 (MQ=255)                                                   cAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAg                                                                                                   >  1:114839/1‑148 (MQ=255)                                                   cAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAg                                                                                                   >  2:366122/1‑148 (MQ=255)                                                    aaGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGa                                                                                                 >  2:276023/1‑149 (MQ=255)                                                     aGCCGTGGCAAGTGGCGTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGAt                                                                                                <  8:195550/149‑1 (MQ=255)                                                      gCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGAtt                                                                                               >  8:1269/1‑149 (MQ=255)                                                      gCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGAtt                                                                                               >  5:62487/1‑149 (MQ=255)                                                           ggCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCa                                                                                                    >  6:16990/1‑139 (MQ=255)                                                           ggCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCa                                                                                                    <  5:16990/139‑1 (MQ=255)                                                            tctaGTGGCTTGTGGATTTTTCTGCGCTGGAATTGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGGGCGTTCATTTATCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCg                                                                                            <  4:342270/143‑1 (MQ=255)                                                              aaGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGc                                                                                                                                  <  6:232849/106‑1 (MQ=255)                                                              aaGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGc                                                                                                                                  >  5:232849/1‑106 (MQ=255)                                                                gTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTTGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACtt                                                                                     <  3:329316/149‑1 (MQ=255)                                                                gTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCggagatcg                                                                                     >  3:342270/1‑143 (MQ=255)                                                                   gCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGc                                                                                  <  6:52834/149‑1 (MQ=255)                                                                     ttGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAg                                                                                                   <  7:182017/130‑1 (MQ=255)                                                                     ttGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAg                                                                                                   >  8:182017/1‑130 (MQ=255)                                                                          gCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCttttt                                                                           <  1:75715/149‑1 (MQ=255)                                                                          gCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCttttt                                                                           <  2:114839/149‑1 (MQ=255)                                                                           cATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTc                                                                          >  6:135597/1‑149 (MQ=255)                                                                            aTTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCt                                                                         <  3:138508/149‑1 (MQ=255)                                                                                tCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCttttt                                                                           >  8:191386/1‑143 (MQ=255)                                                                                tCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCttttt                                                                           <  7:191386/143‑1 (MQ=255)                                                                                        ggAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACcttctt                                                             >  4:228800/1‑149 (MQ=255)                                                                                         gAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCttt                                                            >  5:55915/1‑149 (MQ=255)                                                                                               ttCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCttttt                                                                           <  7:114072/128‑1 (MQ=255)                                                                                               ttCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAgg                                                       <  1:366122/148‑1 (MQ=255)                                                                                               ttCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGc                                                      <  4:357844/149‑1 (MQ=255)                                                                                               ttCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGc                                                      >  4:334296/1‑149 (MQ=255)                                                                                                tCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAg                                                        >  4:50946/1‑146 (MQ=255)                                                                                                  aCGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTg                                                           <  6:85555/141‑1 (MQ=255)                                                                                                  aCGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTg                                                           >  5:85555/1‑141 (MQ=255)                                                                                                    gTCGATACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGTGTAGTCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGAc                                                 <  7:339564/149‑1 (MQ=255)                                                                                                    gTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTg                                                                                                      <  6:35460/96‑1 (MQ=255)                                                                                                       gagaCACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTg                                                           <  4:242696/136‑1 (MQ=255)                                                                                                       gagaCACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTg                                                           >  3:242696/1‑136 (MQ=255)                                                                                                            acaTTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGc                                                                                          <  1:228871/100‑1 (MQ=255)                                                                                                            acaTTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGc                                                                                          >  2:228871/1‑100 (MQ=255)                                                                                                              aTTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTg                                       >  3:123901/1‑149 (MQ=255)                                                                                                               tttGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTGc                                      >  4:172062/1‑149 (MQ=255)                                                                                                                   gACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTGCTTGc                                  >  4:75509/1‑149 (MQ=255)                                                                                                                    acacTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTGCTTGCg                                 >  8:146776/1‑149 (MQ=255)                                                                                                                        tttCACGAACGCGC‑GCGAAGGGGTAGGCTgcgcgttcgtgaaagtgtccaaatgtgtctcgacgtgaacatttccagcgcagacaatgccacaagccacttgccacggcttgcccatgtgtgtaacacgggcgtcataatgagcgctta                             <  3:64039‑M2/149‑121 (MQ=255)                                                                                                                        tttCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTGCTTGCGGGAt                             >  5:243517/1‑149 (MQ=255)                                                                                                                            aCGAACGCGC‑GCGAAGGGGTAGGCTgcgcgttcgtgaaagtgtccaaatgtgtctcgacgtgaacatttccagcgcagacaatgccacaagccacttgccacggcttgcccatgtgtgtaacacgggcgtcataatgagcgcttatctt                         <  2:248282‑M2/149‑125 (MQ=255)                                                                                                                             cGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTGCTTGCGGGATTCCtt                        <  5:135597/149‑1 (MQ=255)                                                                                                                             cGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTGCTTGCGGGATTCCtt                        <  7:146776/149‑1 (MQ=255)                                                                                                                             cGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGCCACCTTCTTTGAAGGCGAGACCATTCTGGTGCTTGCGGGATTCCtt                        <  1:276023/149‑1 (MQ=255)                                                                                                                              gAACGCGC‑GCGAAGGGGTAGGCTgcgcgttcgtgaaagtgtccaaatgtgtctcgacgtgaacatttccagcgcagacaatgccacaagccacttgccacggcttgcccatgt                                                           <  6:322063‑M2/113‑91 (MQ=255)                                                                                                                              gAACGCGC‑GCGAAGGGGTAGGCTgcgcgttcgtgaaagtgtccaaatgtgtctcgacgtgaacatttccagcgcagacaatgccacaagccacttgccacggcttgcccatgt                                                           >  5:322063‑M2/1‑23 (MQ=255)                                                                                                                              gAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTa                                                                        <  6:253999/100‑1 (MQ=255)                                                                                                                              gAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTa                                                                        >  5:253999/1‑100 (MQ=255)                                                                                                                              gAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTGCTTGCGGGATTCCTTg                       >  5:36345/1‑149 (MQ=255)                                                                                                                              gAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTGCTTGCGGGATTCCTTg                       <  4:341817/149‑1 (MQ=255)                                                                                                                                  gcgc‑gcgAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGt                                        <  6:141648/128‑1 (MQ=255)                                                                                                                                    gc‑gcgAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTgg                                         <  2:288522/125‑1 (MQ=255)                                                                                                                                    gc‑gcgAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTgg                                         >  1:288522/1‑125 (MQ=255)                                                                                                                                    gc‑gcgAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTAGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTGCTTGCGGGATTCCTTGCGTTc                  >  5:361558/1‑148 (MQ=255)                                                                                                                                    gc‑gcgAAGGGGTAGGCTGCGCGTTAATTTCTCCAGCAACTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGTCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTGCTTGCGGGATTCCTTGCGtt                   <  6:361558/147‑1 (MQ=255)                                                                                                                                               gTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTGCTTGCGGGATTCCTTGCGTTCCGCGGTTACAt       <  6:243517/149‑1 (MQ=255)                                                                                                                                                    cTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTGCTTGCGGGATTCCTTGCGTTCCGCGGTTACATGGata  >  1:3138/1‑149 (MQ=255)                                                                                                                                                     tGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTGCTTGCGGGATTcc                          <  3:155638/124‑1 (MQ=255)                                                                                                                                                     tGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTGCTTGCGGGATTcc                          >  4:155638/1‑124 (MQ=255)                                                                                                                                                     |                                                                                                                                                    TTGAGCGGCAAGATAAGCGCTCATTATGACGCCCGTGTTACACACATGGGCAAGCCGTGGCAAGTGGCTTGTGGCATTGTCTGCGCTGGAAATGTTCACGTCGAGACACATTTGGACACTTTCACGAACGCGC‑GCGAAGGGGTAGGCTGCGCGTTCATTTCGCCAGCACCTCAGAAAATGCTTCAACAATTCCTGCAGGATTTCGGCTACTTCGCCCTTTTTCTAGGCACCTTCTTTGAAGGCGAGACCATTCTGGTGCTTGCGGGATTCCTTGCGTTCCGCGGTTACATGGATA  >  NC_002947/5953053‑5953347

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.