New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	620042 =	51 (0.860)	3 (0.050)	3/238	NT	7.1%	coding (648/693 nt)	PP_0534	transcriptional regulator PfeR
	?	NC_002947	620117 =	31 (0.560)					coding (573/693 nt)	PP_0534	transcriptional regulator PfeR

CGTTCCACCGAAAGGCCCCAGGTCCAGATGAGCCAGATCAGCAACAGGCAGAAGCTGACTTGCAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACATGCACATCCAGGCCTCGGTCCAGTCGGGTATAGGCCCTGTGCAGCACGGTCTGGTACAGGAAGGGCTTGCTCAACGCTTCGTCGGGGT  >  NC_002947/619897‑620190                                                                                                                                                  |                                                                                                                                                     cGTTCCACCGAAAGGCCCCAGGTCCAGATGAGCCAGATCAGCAACAGGCAGAAGCTGACTTGCAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGc                                                                                                                                                    <  3:131806/148‑1 (MQ=255)  gttatccacaacggcaacgccgctggccttaccgcttccgaattccgcttgctggtcacgctgctggcccaccccgacgaagcgttgagcaagcccttcctgtaccagaccgtgctgcacagggcctatacccgactggaccgaGGCCt                                                                                                                                                  <  5:205601‑M1/5‑1 (MQ=255)  gTTCCACCGAAAGGCCCCAGGTCCAGATGAGCCAGATCAGCAACAGGCAGAAGCTGACTTGCAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCt                                                                                                                                                  <  6:114576/149‑1 (MQ=255)   ttatccacaacggcaacgccgctggccttaccgcttccgaattccgcttgctggtcacgctgctggcccaccccgacgaagcgttgagcaagcccttcctgtaccagaccgtgctgcacagggcctatacccgactggaccgaGGCCTg                                                                                                                                                 >  4:166829‑M1/144‑149 (MQ=255)   ttacACCGAAAGGCCCCAGGTCCAGATGAGCCAGATCATCAACAGGCAGAATCTGACTTGCAGCAAGTCCAGTTTCCACAGCAACGGGTGGCGACGAATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTTGCAACGCACGGCCt                                                                                                                                                  <  8:354086/145‑1 (MQ=255)     ttccacaacggcaacgccgctggccttaccgcttccgaattccgcttgctggtcacgctgctggcccaccccgacgaagcgttgagcaagcccttcctgtaccagaccgtgctgcacagggcctatacccgactggaccgaGGCCTgg                                                                                                                                                >  5:384824‑M1/142‑148 (MQ=255)       aCCGAAAGGCCCCAGGTCCAGATGAGCCAGATCAGCAACAGGCAGAAGCTGACTTGCAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATc                                                                                                                                             >  7:111552/1‑149 (MQ=255)       aCCGAAAGGCCCCAGGTCCAGATGAGCCAGATCAGCAACAGGCAGAAGCTGACTTGCAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGGCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATc                                                                                                                                             <  8:243293/149‑1 (MQ=255)         cGAAAGGCCCCAGGTCCAGATGAGCCAGATCAGCAACAGGCAGAAGCTGACTTGCAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTg                                                                                                                                           >  1:200818/1‑149 (MQ=255)           aaaTGCCCCAGGTCCAGATGAGCCAGATCAGCAACAGGCAGAAGCTGACTTGCAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCa                                                                                                                                         <  5:38283/149‑1 (MQ=255)           aaaGGCCCCAGGTCCAGATGAGCCAGATCAGCAACAGGCAGAAGCTGACTTGCAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTg                                                                                                                                           >  7:114056/1‑147 (MQ=255)            aaGGCCCCAGGTCCAGATGAGCCAGATCAGCAACAGGCAGAAGCTGACTTGCAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAg                                                                                                                                        <  3:185878/149‑1 (MQ=255)               gCCCCAGGTCCAGATGAGCCAGATCAGCAACAGGCAGAAGCTGACTTGCAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTg                                                                                                                                     <  4:104003/149‑1 (MQ=255)               gCCCCAGGTCCAGATGAGCCAGATCAGCAACAGGCAGAAGCTGACTTGCAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTg                                                                                                                                     >  7:247245/1‑149 (MQ=255)                  ccAGGTCCAGATGAGCCAGATCAGCAACAGGCAGAAGCTGACTTGCAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTg                                                                                                                                  <  6:167983/149‑1 (MQ=255)                   cAGGTCCAGATGAGCCAGATCAGCAACAGGCAGAAGCTGACTTGCAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTgg                                                                                                                                 <  7:88582/149‑1 (MQ=255)                             tGAGCCAGATCAGCAACAGGCAGAAGCTGACTTGCAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATg                                                                                                                        <  2:47234/148‑1 (MQ=255)                             tGAGCCAGATCAGCAACAGGCAGAAGCTGACTTGCAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGt                                                                                                                       <  4:247943/149‑1 (MQ=255)                                 ccAGATCAGCAACAGGCAGAAGCTGACTTGCAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGc                                                                                                                   >  4:172112/1‑149 (MQ=255)                                 ccAGATCAGCAACAGGCAGAAGCTGACTTGCAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGc                                                                                                                   >  6:200120/1‑149 (MQ=255)                                    gATCAGCAACAGGCAGAAGCTGACTTGCAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGcc                                                                                                                  <  3:279068/147‑1 (MQ=255)                                         gCAACAGGCAGAAGCTGACTTGCAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTgc                                                                                                           >  4:258326/1‑149 (MQ=255)                                          cAACAGGCAGAAGCTGACTTGTAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTgcg                                                                                                          <  1:29499/149‑1 (MQ=255)                                          cAACAGGCAGAAGCTGACTTGCAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTgcg                                                                                                          >  6:211378/1‑149 (MQ=255)                                          cAACAGGCAGAAGCTGACTTGCAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTgcg                                                                                                          <  3:306143/149‑1 (MQ=255)                                            aCAGGCAGAAGCTGACTTGCAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTgcggc                                                                                                        >  6:122959/1‑149 (MQ=255)                                             cAGGCAGAAGCTGACTTGCAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTgcggcg                                                                                                       >  6:355269/1‑149 (MQ=255)                                                 cAGAAGCTGACTTGCAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAgg                                                                                                   <  5:200120/149‑1 (MQ=255)                                                    atgCTGACTTGCAGCAAGGCCTGTTTCCACAGCAACGGGTGGCGACGCTTCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGTCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTg                                                                                                <  8:114056/147‑1 (MQ=255)                                                    aaGCTGACTTGCAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTg                                                                                                <  8:247245/149‑1 (MQ=255)                                                      tggtcacgctgctggcccaccccgacgaagcgttgagcaagcccttcctgtaccagaccgtgctgcacagggcctatacccgactggaccgaGGCCTGGa                                                                                                                                               <  6:40718‑M1/8‑1 (MQ=255)                                                      tggtcacgctgctggcccaccccgacgaagcgttgagcaagcccttcctgtaccagaccgtgctgcacagggcctatacccgactggaccgaGGCCTGGa                                                                                                                                               >  5:40718‑M1/93‑100 (MQ=255)                                                         gACTTGCAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACAAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGGTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGcaca                                                                                            >  5:327740/1‑148 (MQ=255)                                                           cTTGCAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACAt                                                                                         <  8:111552/149‑1 (MQ=255)                                                            ttGCAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACAt                                                                                         >  7:338580/1‑148 (MQ=255)                                                              gcagcaAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACAt                                                                                         <  8:338580/146‑1 (MQ=255)                                                               cagcaAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACATGcac                                                                                     <  2:200818/149‑1 (MQ=255)                                                                        cAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACATGCACATCCAGGc                                                                             >  7:69544/1‑148 (MQ=255)                                                                           cggacgatgcgttttggcagcccttcctctacccgaccgtgcggcacagggcctatacccgactggaccgaGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGGGGCGCAGGTTGCACACATGCACATCCAGGCCTCg                                                                         >  1:320797‑M1/72‑149 (MQ=255)                                                                            cgacgaagcgttgagcaagcccttcctgtaccagtccgtgctgcacagggcctatacccgactggaccgaGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACATGCACATCCAGGcc                                                                            >  4:41110‑M1/71‑145 (MQ=255)                                                                            cgacgaagcgttgagcaagcccttcctgtaccagtccgtgctgcacagggcctatacccgactggaccgaGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACATGCACATCCAGGcc                                                                            <  3:41110‑M1/75‑1 (MQ=255)                                                                                     aaCGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACATGCACATCCAGGCCTCGGTCCAGTCgg                                                               <  3:327217/149‑1 (MQ=255)                                                                                          gTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACATGCACATCCAGGCCTCGGTCCAGTCGGGta                                                            >  7:274451/1‑147 (MQ=255)                                                                                           tGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACATGCACATCCAGGCCTCGGTCCAGTCGGGTATAg                                                         <  5:211378/149‑1 (MQ=255)                                                                                               gACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACATGCACATCCAGGCCTCGGTCCAGTCGGGTATAGGccc                                                     >  1:249083/1‑149 (MQ=255)                                                                                               gACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACATGCACATCCAGGCCTCGGTCCAGTCGGGTATAGGccc                                                     >  2:118879/1‑149 (MQ=255)                                                                                                   cATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACACGCACATCCAGGCCTCGGTCCAGTCGGGTATAgg                                                        >  4:32339/1‑142 (MQ=255)                                                                                                   cATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACACGCACATCCAGGCCTCGGTCCAGTCGGGTATAgg                                                        <  3:32339/142‑1 (MQ=255)                                                                                                     tCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACATGCACATCCAGGCCTCGGTCCAGTCGGGTATAGGCCCTGTgca                                               <  5:122959/149‑1 (MQ=255)                                                                                                              cTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACATGCACATCCAGGCCTCGGTCCAGTCGGGTATAGGCCCTGTGCAGCACGGTCt                                      >  4:32345/1‑149 (MQ=255)                                                                                                                 cGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACATGCACATCCAGGCCTCGGTCCAGTCGGGTATAGGCCCTGTGCAGCACGGTCTgg                                    <  3:258326/148‑1 (MQ=255)                                                                                                                     cggagcAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACATGCACATCCAGGCCTCGGTCCAGTCGGGTATAGGCCCTGTGCAGCACGGTCTGGTACAg                               <  3:220328/144‑1 (MQ=255)                                                                                                                         ccAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACATGCACATCCAGGCCTCGGTCCAGTCGGGTATAGGCCCTGTGCAGCACGGTCTGGTACAGGAAg                           <  2:249083/149‑1 (MQ=255)                                                                                                                          cAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACATGCACATCCAGGCCTCGGTCCAGTCGGGTATAGGCCCTGTGCAGCACGGTCTGGTACAGGAAgg                          >  2:49682/1‑149 (MQ=255)                                                                                                                            ggATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACATGCACATCCAGGCCTCGGTCCAGTCGGGTATAGGCCCTGTGCAGCACGGTCTGGTACAGGAAGGGc                        <  6:327740/149‑1 (MQ=255)                                                                                                                            ggATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACATGCACATCCAGGCCTCGGTCCAGTCGGGTATAAGCCCTGTGCAGCACGGTCTg                                     <  7:231020/136‑1 (MQ=255)                                                                                                                            ggATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACATGCACATCCAGGCCTCGGTCCAGTCGGGTATAAGCCCTGTGCAGCACGGTCTg                                     >  8:231020/1‑136 (MQ=255)                                                                                                                             gATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACATGCACATCCAGGCCTCGGTCCAGTCGGGTATAGGCCCTGTGCAGCACGGTCTGGTACAGGAAGGGc                        >  4:278837/1‑148 (MQ=255)                                                                                                                             gATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACATGCACATCCAGGCCTCGGTCCAGTCGGGTATAGGCCCTGTGCAGCACGGTCTGGTACAGGAAGGGc                        <  3:278837/148‑1 (MQ=255)                                                                                                                                        ggCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACATGCACATCCAGGCCTCGGTCCAGTCGGGTATAGGCCCTGTGCAGCACGGTCTGGTACAGGAAGGGCTTGCTCAACg              <  3:32345/147‑1 (MQ=255)                                                                                                                                          ccACGCACGTCCTGGATCTGCAGGTGCTGGGCATTGATGTCTGCCAGTTTGCGGCGCAGGTTGCACACATGCACATCCAGGCCt                                                                           <  1:8212/84‑1 (MQ=255)                                                                                                                                          ccACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACAAATGCACATCCAGGCCt                                                                           >  2:8212/1‑84 (MQ=255)                                                                                                                                                acgGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACATGCACATCCAGGCCTCGGTCCAGTCGGGTATAGGCCCTGTGCAGGACGGTCTGGTACAGGAAGGGCTTGCTCAACGCTTCGTCggg    >  3:287824/1‑149 (MQ=255)                                                                                                                                                  GGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACATGCACATCCAGGCCTCGGTCCAGTCGGGTATAGGCCCTGTGCAGCACGGTCTGGTACAGGAAGGGCTTGCTCAACGCTTCGTCGGGGt  <  5:67572‑M1/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                     CGTTCCACCGAAAGGCCCCAGGTCCAGATGAGCCAGATCAGCAACAGGCAGAAGCTGACTTGCAGCAAGGCCAGTTTCCACAGCAACGGGTGGCGACGCATCAGGCCTGCTCCGTGTCGACCAGGATGTACCCTTGGCCACGCACGGCCTGGATCTGCAGGTGCTGGGCATTGATGTCGGCCAGTTTGCGGCGCAGGTTGCACACATGCACATCCAGGCCTCGGTCCAGTCGGGTATAGGCCCTGTGCAGCACGGTCTGGTACAGGAAGGGCTTGCTCAACGCTTCGTCGGGGT  >  NC_002947/619897‑620190

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.