New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1357142	58 (0.980)	3 (0.050)	3/244	NT	5.0%	coding (323/1608 nt)	PP_1182	sensor histidine kinase
	?	NC_002947	= 1357169	58 (1.030)					coding (350/1608 nt)	PP_1182	sensor histidine kinase

AATGAAACCCAACGCAAGCGTTCGCTGCTGATCTGGGAACGCCTGCTTGGCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCAAACAGATCAGCGAGCAGTTGGCGCGGGCCACCCTCTATCTATTGGCCGACGAATTGGTGCGCTACCCGGTAGCCGAACAGCAGCA  >  NC_002947/1356994‑1357289                                                                                                                                                     |                                                                                                                                                    aaTGAAACCCAACGCAAGCGTTCGCTGCTGATCTGGGAACGCCTGCTTGGCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCC                                                                                                                                                     <  4:204524‑M1/149‑1 (MQ=255)  aTGAAACCCAACGCAAGCGTTCGCTGCTGATCTGGGAACGCCTGCTTGGCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCC                                                                                                                                                     <  5:179155‑M1/148‑1 (MQ=255)        cccAACGCAAGCGTTCGCTGCTGATCTGGGAACGCCTGCTTGGCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATgcg                                                                                                                                              >  8:135200/1‑149 (MQ=255)         ccAACGCAAGCGTTCGCTGCTGATCTGGGAACGCCTGCTTGGCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATgcgg                                                                                                                                             >  5:72548/1‑149 (MQ=255)              gCAAGCGTTCGCTGCTGATCTGGGAACGCCTGCTTGGCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGgcgc                                                                                                                                          >  2:134032/1‑147 (MQ=255)              gCAAGCGTTCGCTGCTGATCTGGGAACGCCTGCTTGGCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGgcgc                                                                                                                                          >  3:136932/1‑147 (MQ=255)                aaGCGTTCGCTGCTGATCTGGGAACGCCTGCTTGGCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGt                                                                                                                                      <  2:98749/149‑1 (MQ=255)                        gctgctGATCTGGGAACGCCTGCTTGGCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGc                                                                                                                               <  4:136932/148‑1 (MQ=255)                              gATCTGGGAACGCCTGCTTGGCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTgg                                                                                                                        <  7:305654‑M2/149‑3 (MQ=255)                               aTCTGGGAACGCCTGCTTGGCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCaccttgcgtagcacttgcgccgcatgcggg                                                                                                                       >  5:192017‑M1/1‑119 (MQ=255)                               aTCTGGGAACGCCTGCTTGGCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTggg                                                                                                                       <  2:48422‑M2/149‑4 (MQ=255)                               aTCTGGGAACGCCTGCTTGGCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTgg                                                                                                                        >  4:127253‑M2/1‑146 (MQ=255)                                    ggAACGCCTGCTTGGCGTGCAGTTGGCGCTGTAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAgg                                                                                                                  <  8:39323/149‑1 (MQ=255)                                    ggAACGCCTGCTTGGCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCaccttgcgtagcacttgcgccgcatgcgggcca                                                                                                                    <  6:158710‑M1/147‑34 (MQ=255)                                    ggAACGCCTGCTTGGCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAg                                                                                                                   >  2:285704/1‑148 (MQ=255)                                    ggAACGCCTGCTTGGCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAg                                                                                                                   >  7:197065/1‑148 (MQ=255)                                     gAACGCCTGCTTGGCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGGGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCaccttgcgtagcacttgcgccgcatgcgggccaatc                                                                                                                 <  6:192017‑M1/149‑37 (MQ=255)                                      aaCGCCTGCTTGGCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGaa                                                                                                                <  5:158555/149‑1 (MQ=255)                                       aCGCCTGCTTGGCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGGCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAg                                                                                                               <  7:111423/149‑1 (MQ=255)                                        cGCCTGCTTGGCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCATGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGa                                                                                                              <  2:146152/149‑1 (MQ=255)                                         gCCTGCTTGGCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGAc                                                                                                             <  4:358363/149‑1 (MQ=255)                                          ccTGCTTGGCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGc                                                                                                                                    >  8:185028/1‑125 (MQ=255)                                          ccTGCTTGGCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGc                                                                                                                                    <  7:185028/125‑1 (MQ=255)                                           cTGCTTGGCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACg                                                                                                                                >  3:273105/1‑128 (MQ=255)                                           cTGCTTGGCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACg                                                                                                                                <  4:273105/128‑1 (MQ=255)                                              cTTGGCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGAt                                                                                                        <  3:146348/149‑1 (MQ=255)                                                  gCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCt                                                                                                     <  6:321162/148‑1 (MQ=255)                                                  gCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTg                                                                                                    <  3:226288/149‑1 (MQ=255)                                                  gCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTg                                                                                                    <  7:30958/149‑1 (MQ=255)                                                     tGCAGTTGGCGCTGCAGCCGATGAGCGCAGGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCACAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTc                                                                                                 <  5:255084/149‑1 (MQ=255)                                                         gTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTcgcg                                                                                              >  4:289311/1‑148 (MQ=255)                                                           tGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCa                                                                                            <  6:119608/148‑1 (MQ=255)                                                            ggCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTcgcg                                                                                              >  2:370498/1‑145 (MQ=255)                                                             gcgcTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTgg                                                                                                                        >  4:162476‑M2/1‑116 (MQ=255)                                                             gcgcTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTgg                                                                                                                        <  3:162476‑M2/118‑3 (MQ=255)                                                             gcgcTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGAt                                                                                         <  7:135200/149‑1 (MQ=255)                                                              cgcTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATc                                                                                        <  4:291661/149‑1 (MQ=255)                                                                cTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCa                                                                                       >  8:222681/1‑148 (MQ=255)                                                                   cAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCaaa                                                                                     <  1:285704/147‑1 (MQ=255)                                                                            aGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCAAACAGATCAGCg                                                                           <  1:370498/148‑1 (MQ=255)                                                                             gcgcACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCAAACAGATCAGCGAg                                                                         >  1:187547/1‑149 (MQ=255)                                                                             gcgcACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCAAACAGATCAGCGAg                                                                         >  3:162897/1‑149 (MQ=255)                                                                               gcacgcaGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCAAACAGATCAGCGAGCa                                                                       <  6:262325/149‑1 (MQ=255)                                                                                           gACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCAAACAGATCAGCGAGCAGTTGGCGCgg                                                             <  3:289311/147‑1 (MQ=255)                                                                                               gTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCAAACAGATCAGCGAGCAGTTGGCGCGGGCCAcc                                                       <  2:187547/149‑1 (MQ=255)                                                                                                   ccAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCAAACAGATCAGCGAGCAGTTGGCGCGGGCCACCctct                                                   <  4:162897/149‑1 (MQ=255)                                                                                                       cGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCAAACAGATCAGCGAGCAGTTGGCGCGGGCCACCCtctatc                                                >  7:272581/1‑148 (MQ=255)                                                                                                           cgcgcCTGTACCGTGGCCTGGTGGTGGGCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGCCCAGGAAGACCTGATGCTGGTCGCGCAGATCAAACAGATCAGCGAGCAGTTGGCGCGGGCCACCCTCTATCTATTg                                           <  4:227502/149‑1 (MQ=255)                                                                                                            gcgcCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCAAACAGATCAGCGAGCAGTTGGCGCGGGCCACCCTCTATCTATTgg                                          >  3:245383/1‑149 (MQ=255)                                                                                                                   tACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCAAACAGATCAGCGAGCAGTTGGCGCGGGCCACCCTCTATCTATTGGCcgacg                                    >  5:493/1‑148 (MQ=255)                                                                                                                     ccGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGCTCAAACAGATCAGCGAGCAGTTGGCGCGGGCCCCCCTCTATCTATTGGCCGACGAAt                                 >  7:54981/1‑149 (MQ=255)                                                                                                                     ccGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCAAACAGATCAGCGAGCAGTTGGCGCGGGCCACCCTCTATCTATTGGCcgacga                                   >  1:48164/1‑147 (MQ=255)                                                                                                                     ccGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCAAACAGATCAGCGAGCAGTTGGCGCGGGCCACCCTCTATCTATTGGCcgacga                                   <  2:48164/147‑1 (MQ=255)                                                                                                                     ccGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCAAACAGATCAGCGAGCAGTTGGCGCGGGCCACCCTCTATCTATTGGCCGACGAAt                                 >  3:308376/1‑149 (MQ=255)                                                                                                                     ccGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCAAACAGATCAGCGAGCAGTTGGCGCGGGCCACCCTCTATCTATTGGCCGACGAAt                                 >  6:365393/1‑149 (MQ=255)                                                                                                                       gTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCAAACAGATCAGCGAGCAGTTGGCGCGGGCCACCCTCTATCTATTGGCCGACGAATTg                               <  6:72548/149‑1 (MQ=255)                                                                                                                         ggCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCAAACAGATCAGCGAGCAGTTGGCGCGGGCCAcc                                                       <  7:220709/123‑1 (MQ=255)                                                                                                                         ggCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCAAACAGATCAGCGAGCAGTTGGCGCGGGCCAcc                                                       >  8:220709/1‑123 (MQ=255)                                                                                                                                    ggtCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCAAACAGATCAGCGAGCAGTTGGCGCGGGCCACCCTCTATCTATTGGCCGACGAATTGGTGCGCTACCCgg                  <  6:33276/149‑1 (MQ=255)                                                                                                                                    gggcGAGAAGATTGGCCCGCATGCGGAGCAAGTGCTACTCAAGGTGGTCCAGGAAGACCTGATGCTGGTCGCGCAGATCAACCAGATCAGCGAGCAGTTGGCGCGGGCCACCCTCTATCTATTGGCCGACGAATTGGTTCGCTACCCgg                  <  8:272581/146‑1 (MQ=255)                                                                                                                                     gtCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCAAACAGATCAGCGAGCAGTTGGCGCGGGCCACCCTCTATCTATTGGCCGACGAATTGGTGCGCTACCCgg                  <  4:245383/148‑1 (MQ=255)                                                                                                                                        gagaAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCAAACAGATCAGCGAGCAGTTGGCGCGGGCCACCCTCTATCTATTGGCCGACGAATTGGTg                            >  6:38794/1‑135 (MQ=255)                                                                                                                                        gagaAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCAAACAGATCAGCGAGCAGTTGGCGCGGGCCACCCTCTATCTATTGGCCGACGAATTGGTg                            <  5:38794/135‑1 (MQ=255)                                                                                                                                        gagaAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCAAACAGATCAGCGAGCAGTTGGCGCGGGCCACCCTCTATCTATTGGCCGACGAATTGGTGCGCTACCCggagct              >  7:288300/1‑145 (MQ=255)                                                                                                                                        gagaAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCAAACAGATCAGCGAGCAGTTGGCGCGGGCCACCCTCTATCTATTGGCCGACGAATTGGTGCGCTACCCg                   <  8:288300/144‑1 (MQ=255)                                                                                                                                         ataagaTTGGCCCGCATGCGGAGCAAGTGCTACCCAAGGTGGGCCAGGAAGACCTTATGCTGGTCGCGCAGATCAAACAGATCAGCGAGCAGTTGGCGCGGGCCACCCTCTATCTATTGGCCGACGAATTGGTGCGCTACCCGGTAGcc             <  7:235612/147‑1 (MQ=255)                                                                                                                                         agaagaTTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCAAACAGATCAGCGAGCAGTTGGCGCGGGCCACCCTCTATCTATTGGCCGACGAATTGGTGCGCTACCCGGTAGcc             <  4:308376/149‑1 (MQ=255)                                                                                                                                          gaagaTTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGGCGCGCAGATCAAACAGATCAGCGAGCAGTTGGCGCGGGCCACCCTCTATCTATTGGCCGACGAATTGGTGCGCTACCCGGTAGCCg            <  8:197065/149‑1 (MQ=255)                                                                                                                                             gaTTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTgggccaatcttctcgaccaccaccaggccacggtacaggcgcgccccctggccaccgtcaaggctgcgtgcgctcatcggctgcagcgccaactgcacgccaagcaggcgttc         <  6:192017‑M2/149‑114 (MQ=255)                                                                                                                                                tGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTgggccaatcttctcgaccaccaccaggccacggtacaggcgcgcccgctggccaccgtcaaggctgcgtgcgctcatcggctgcagcgccaactgcacgccaagcaggcgttcc        <  6:158710‑M2/147‑115 (MQ=255)                                                                                                                                                  gCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCAAACAGATCAGCGAGCAGTTGGCGCGGGCCACCCTCTATCTATTGGCCGACGAATTGGTGCGCTACCCGGTAGCCGAAcagcag    >  1:207058/1‑149 (MQ=255)                                                                                                                                                  gCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCAAACAGATCAGCGAGCAGTTGGCGCGGGCCACCCTCTATCTATTGGCCGACGAATTGGTGCGCTACCCGGTAGCCGAAcagcag    <  7:222681/149‑1 (MQ=255)                                                                                                                                                   cccaccttgcgtagcacttgcgccgcatgcgggccaatcttctcgaccaccaccaggccacggtacaggcgcgcccgctggccaccgtcaaggctgcgtgcgctcatcggctgcagcgccaactgcacgccaagcaggcgttcccagat   <  2:48422‑M1/149‑147 (MQ=255)                                                                                                                                                   cccGCATGCGGCGCAAGTGCTACGCAAGGTgggccaatcttctcgaccaccaccaggccacggtacaggcgcgcccgctggccaccgtcaaggctgcgtgcgctcatcggctgcagcgccaactgcacgccaagcaggcgttcccagat   >  5:192017‑M2/1‑30 (MQ=255)                                                                                                                                                    ccaccttgcgtagcacttgcgccgcatgcgggccaatcttctcgaccaccaccaggccacggtacaggcgcgcccgctggccaccgtcaaggctgcgtgcgctcatcggctgcagcgccaactgcacgccaagcaggcgttcccagatc  <  7:305654‑M1/149‑148 (MQ=255)                                                                                                                                                    ccaccttgcgtagcacttgcgccgcatgcgggccaatcttctcgaccaccaccaggccacggtacaggcgcgcccgctggccaccgtcaaggctgcgtgcgctcatcggctgcagcgccaactgcacgccaagcaggcgttcccagat   >  4:127253‑M1/1‑2 (MQ=255)                                                                                                                                                    ccaccttgcgtagcacttgcgccgcatgcgggccaatcttctcgaccaccaccaggccacggtacaggcgcgcccgctggccaccgtcaaggctgcgtgcgctcatcggctgcagcgc                                 <  3:162476‑M1/118‑117 (MQ=255)                                                                                                                                                    ccaccttgcgtagcacttgcgccgcatgcgggccaatcttctcgaccaccaccaggccacggtacaggcgcgcccgctggccaccgtcaaggctgcgtgcgctcatcggctgcagcgc                                 >  4:162476‑M1/1‑2 (MQ=255)                                                                                                                                                     |                                                                                                                                                    AATGAAACCCAACGCAAGCGTTCGCTGCTGATCTGGGAACGCCTGCTTGGCGTGCAGTTGGCGCTGCAGCCGATGAGCGCACGCAGCCTTGACGGTGGCCAGCGGGCGCGCCTGTACCGTGGCCTGGTGGTGGTCGAGAAGATTGGCCCGCATGCGGCGCAAGTGCTACGCAAGGTGGGCCAGGAAGACCTGATGCTGGTCGCGCAGATCAAACAGATCAGCGAGCAGTTGGCGCGGGCCACCCTCTATCTATTGGCCGACGAATTGGTGCGCTACCCGGTAGCCGAACAGCAGCA  >  NC_002947/1356994‑1357289

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.