New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1811415 =	55 (0.930)	3 (0.060)	3/210	NT	8.0%	intergenic (+22/+106)	ispD/PP_1615	2‑C‑methyl‑D‑erythritol 4‑phosphate cytidylyltransferase/LysR family transcriptional regulator
	?	NC_002947	1811495 =	24 (0.500)					intergenic (+102/+26)	ispD/PP_1615	2‑C‑methyl‑D‑erythritol 4‑phosphate cytidylyltransferase/LysR family transcriptional regulator

CGAAGCCTCGGCCATCGAATGGTCCGGTCAGGCGCCGCGGCTGGTGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAGCAGCACATCCCGTCAGCCGAAACGATACTCC  >  NC_002947/1811267‑1811539                                                                                                                                                     |                                                                                                                             cgccgaatacggcggtatgggcgctgtatccgcagcagaggcacctgtcgccgaaggtacggcggctggtggattacctgaaggaggggttggcggggttgccggagtatcgtttcggctgacgggatgtgctgctggtactggcctct                                                                                                                              <  7:278995‑M1/1‑1 (MQ=255)  gccgaatacggcggtatgggcgctgtatccgcagcagaggcacctgtcgccgaaggtacggcggctggtggattacctgaaggaggggttggcggggttgccggagtatcgtttcggctgacgggatgtgctgctggtactggcctctt                                                                                                                             >  2:137993‑M1/148‑149 (MQ=255)  gccgaatacggcggtatgggcgctgtatccgcagcagaggcacctgtcgccgaaggtacggcggctggtggattacctgaaggaggggttggcgggggtgccggagtatcgtgtcggctgacgggatgtgctgctggtactggcctctt                                                                                                                             >  2:137997‑M1/148‑149 (MQ=255)     gCCTCGGCCATCGAATGGTCCGGTCAGGCGCCGCGGCTGGTGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTcgc                                                                                                                          <  6:294311/149‑1 (MQ=255)      ccTCGGCCATCGAATGGTCCGGTCAGGCGCCGCGGCTGGTGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTcgcg                                                                                                                         >  5:176812/1‑149 (MQ=255)       cTCGGCCATCGAATGGTCCGGTCAGGCGCCGCGGCTGGTGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCgg                                                                                                                        <  1:179725/149‑1 (MQ=255)       cTCGGCCATCGAATGGTCCGGTCAGGCGCCGCGGCTGGTGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCgg                                                                                                                        <  8:221700/149‑1 (MQ=255)       atacggcggtatgggcgctgtatccgcagcagaggcacctgtcgccgaaggtacggcggctggtggattacctgaaggaggggttggcggggttgccggagtatcgtttcggctgacgggatgtgctgctggtactggcctcTTCGCgg                                                                                                                        >  3:100472‑M1/143‑149 (MQ=255)        tCGGCCATCGAATGGTCCGGTCAGGCGCCGCGGCTGGTGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCggg                                                                                                                       >  5:356774/1‑149 (MQ=255)        tCGGCCATCGAATGGTCCGGTCAGGCGCCGCGGCTGGTGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCggg                                                                                                                       >  2:37080/1‑149 (MQ=255)          ggCCATCGAATGGTCCGGTCAGGCGCCGCGGCTGGTGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGt                                                                                                                      <  2:224365/148‑1 (MQ=255)          cggcggtatgggcgctgtatccgcagcagaggcacctgtcgccaaaggtacggcggctggtggattacctgaaggaggggttggctgggttgccggagtatcgtttcggctgacgggatgtgctgctggtactggcctcTTCGCGGGt                                                                                                                      >  6:73681‑M1/140‑148 (MQ=255)            gcggtatgggcgctgtatccgcagcagaggcacctgtcgccgaaggtacggcggctggtggattacctgaaggaggggttggcggggttgccggagtatcgtttcggctgacgggatgtgctgctggtactggcctcTTCGCGGGTaaa                                                                                                                   >  8:278995‑M1/138‑149 (MQ=255)             cggtatgggcgctgtatccgcagcagaggcacctgtcgccgaaggtacggcggctggtggattacctgaaggaggggttggcggggttgccggagtatcgtttcggctgacgggatgtgctgctggtactggcctcTTCGCGGGTAAAc                                                                                                                  >  5:313965‑M1/137‑149 (MQ=255)             cATCGAATGGTCCGGTCAGGCGCCGCGGCTGGTGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAAc                                                                                                                  >  4:59910/1‑149 (MQ=255)               tCGAATGGTCCGGTCAGGCGCCGCGGCTGGTGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAAccc                                                                                                                >  4:109/1‑149 (MQ=255)                cGATTGGGCCGGTCAGGCGCCGGGGCTGGTCGAAGGGCGCAGAGACAACATAAAGGTGACCCGGCGCGAAGAGCTCGATTGGTTGCGCGAGCGCTGGGCGGGTAAACGGTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAAccc                                                                                                                <  4:197709/148‑1 (MQ=255)                  tgggcgctgtatccgcagcagaggcacctgtcgccgaaggtacggcggctggtggattacctgaaggaggggttggcggggttgccggagtatcgtttcggctgacgggatgtgctgctggtactggcctcTTCGCGGGTAAACCCGCt                                                                                                             <  1:137062‑M1/18‑1 (MQ=255)                    ggcgctgtatccgcagcagaggcacctgtcgccgaaggtacggcggctggtggattacctgaaggaggggttggcggggttgccggagtatcgtttcggctgacgggatgtgctgctggtactggcctcTTCGCGGGTAAACCCGCTcc                                                                                                           >  1:69046‑M1/130‑149 (MQ=255)                      gTCCGGTCAGGCGCCGCGGCTGGTGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTa                                                                                                         <  3:243032/149‑1 (MQ=255)                      cgctgtatccgcagcagaggcacctgtcgccgaaggtacggcggctggtggattacctgaaggaggggttggcggggttgccggagtatcgtttcggctgacgggatgtgctgctggtactggcctcTTCGCGGGTAAACCCGCTCCTa                                                                                                         <  4:65928‑M1/22‑1 (MQ=255)                       tCCGGTCAGGCGCCGCGGCTGGTGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTcgc                                                                                                                          >  8:128618/1‑131 (MQ=255)                       tCCGGTCAGGCGCCGCGGCTGGTGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTcgc                                                                                                                          <  7:128618/131‑1 (MQ=255)                       tCCGGTCAGGCGCCGCGGCTGGTGGAAGGGCGCAGTCACAAAATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTCGACGGGTAAACGCTGAGCGTAAACATGGGCTGGCATTTTCGCGGGTAAACCCGcacata                                                                                                         >  8:54063/1‑143 (MQ=255)                         cGGTCAGGCGCCGCGGCTGGTGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACaa                                                                                                      >  1:46161/1‑149 (MQ=255)                          ggTCAGGCGCCGCGGCTGGTGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAAt                                                                                                     <  1:37080/149‑1 (MQ=255)                          ggTCAGGCGCCGCGGCTGGTGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAAt                                                                                                     <  4:62778/149‑1 (MQ=255)                           gTCAGGCGCCGCGGCTGGTGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATg                                                                                                    >  4:192492/1‑149 (MQ=255)                                gcgcCGCGGCTGGTGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGAt                                                                                                 <  2:60028/147‑1 (MQ=255)                                gcgcCGCGGCTGGTGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGAt                                                                                                 >  1:60028/1‑147 (MQ=255)                                gcgcCGCGGCTGGTGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTg                                                                                               >  8:16691/1‑149 (MQ=255)                                gcgcCGCGGCTGGTGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTCAGCCTTATCATGGGCTGGCCTTTTAGCGGGTAAACCCGCTCATACAATGGAttt                                                                                               >  7:153297/1‑148 (MQ=255)                                  gccgcGGCTGGTGGAAGGGCGCTGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATg                                                                                                    <  1:375006/142‑1 (MQ=255)                                  gccgcGGCTGGTGGAAGGGCGCGGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATg                                                                                                    >  2:375006/1‑142 (MQ=255)                                         cTGGTGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCggtgg                                                                                      <  7:16691/149‑1 (MQ=255)                                            gtggAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGtt                                                                                    <  3:109/148‑1 (MQ=255)                                            gtggAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGtt                                                                                    <  2:104303/148‑1 (MQ=255)                                              ggAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGa                                                                                 >  4:96868/1‑149 (MQ=255)                                               gAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGac                                                                                <  6:176812/149‑1 (MQ=255)                                                aaGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGGGGTTGGacc                                                                               >  5:209434/1‑148 (MQ=255)                                                   ggCTCAGGGAAAACATAAATGTGACCGGGCCCGAAGCTCTCGATTGGTTGCGCCAGCGCTGGGCGGTTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGAcaca                                                                             <  8:153297/148‑1 (MQ=255)                                                            tcaataTATAGGTGTCGCGTCCCGTATATCTAGAATGGTTGCGCCAGCGCTGGGCGGGTAATCGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAATCCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACcgtcgt                                                                    <  7:54063/147‑1 (MQ=255)                                                            acaacaTAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACACACcgtcg                                                                     >  4:21805/1‑147 (MQ=255)                                                                  ctggtggattacctgaaggaggggttggcggggttgccggagtatcgtttcggctgacgggatgtgctgctggtactggcctcTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCg                                                             >  4:26503‑M1/84‑149 (MQ=255)                                                                    aaGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCggg                                                           <  3:192492/149‑1 (MQ=255)                                                                    aaGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCgg                                                            <  3:96868/148‑1 (MQ=255)                                                                     aGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGt                                                          >  8:73655/1‑149 (MQ=255)                                                                     aGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGt                                                          >  7:259580/1‑149 (MQ=255)                                                                     aGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCGACAATGGATTGCATAGGTGGTTGGCCACAGACCGTCCTAGGAGCGGGt                                                          >  2:125101/1‑149 (MQ=255)                                                                            ccGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACcgtcgt                                                                    >  5:287750/1‑132 (MQ=255)                                                                            ccGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACcgtcgt                                                                    <  6:287750/132‑1 (MQ=255)                                                                               gCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCcgcg                                                 >  2:232206/1‑148 (MQ=255)                                                                                cccTAAGCTCTCTAATTGTGTCGCCAGCGCTGGGCGGGTAAACGCTGCGCGTTCTCGTGGGCTGGCCTTTGCGGGGTTAAACCCGCTCCTACAATGTATTGCATCGGTGGTTGGCCACAGACCGTCGTAGGAGCGGTTTTACCCGCGaa                                               <  6:209434/149‑1 (MQ=255)                                                                                  cGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAaga                                             <  3:59910/149‑1 (MQ=255)                                                                                   ggaggggttggcggggttgccggagtatcgtttcggctgacgggatgtgctgctggtactggcctcTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGt                                                          >  1:195767‑M1/67‑135 (MQ=255)                                                                                   ggaggggttggcggggttgccggagtatcgtttcggctgacgggatgtgctgctggtactggcctcTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGt                                                          <  2:195767‑M1/69‑1 (MQ=255)                                                                                     ctagctctAATGGTTGCGCCAGGGGTGGGGGGTTAAACGCTGAGCTTTCTCCTGGGCTGCCATTTTCGCGGGTAAACCCGCTCCTACAATGTATTGCATCGGTGGTTGGACACACACCGTCGTAGTAGCGGTTTTACCCGCGAAGAGGc                                          <  8:69949/145‑1 (MQ=37)                                                                                         ctcGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAg                                       >  3:285969/1‑148 (MQ=255)                                                                                           cGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTAc                                    <  7:73655/149‑1 (MQ=255)                                                                                            gAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTTCAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTAc                                    >  3:65928/1‑148 (MQ=255)                                                                                               tGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACcagc                                <  2:46161/149‑1 (MQ=255)                                                                                               ggggttgccggagtatcgtttcggctgacgggatgtgctgctggtactggcctcTTcgc                                                                                                                          <  1:15916‑M1/5‑1 (MQ=255)                                                                                               ggggttgccggagtatcgtttcggctgacgggatgtgctgctggtactggcctcTTcgc                                                                                                                          >  2:15916‑M1/55‑59 (MQ=255)                                                                                                 gTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGGGCCGAAAATGGATTGGATGGGTGGGTGGACCCAGACCGGGGTAGGAGCGGGGTTTCCCGCGAAGAGGGCCGTACcagccg                              >  5:246023/1‑147 (MQ=255)                                                                                                 gTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACcagcag                              <  1:125101/149‑1 (MQ=255)                                                                                                     cgcCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGTTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAGCAGcaca                          <  6:356774/149‑1 (MQ=255)                                                                                                        cAGCGCTGGGCGGGTTAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAGCAGCACATcc                       <  8:259580/149‑1 (MQ=255)                                                                                                                     ggctgacgggatgtgctgctggtactggcctcTTCGCGGGTAAAcc                                                                                                                 <  2:348553‑M1/14‑1 (MQ=255)                                                                                                                     ggctgacgggatgtgctgctggtactggcctcTTCGCGGGTAAAcc                                                                                                                 >  1:348553‑M1/33‑46 (MQ=255)                                                                                                                     gTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAGCAGCACATCCCGTCAGCCGAAAc          >  1:80388/1‑149 (MQ=255)                                                                                                                        aaCGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAGCAGCACATCCCGTCAGCCGAAACGAt       <  2:80388/149‑1 (MQ=255)                                                                                                                           gCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGc                                          >  8:76864/1‑111 (MQ=255)                                                                                                                           gCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGc                                          <  7:76864/111‑1 (MQ=255)                                                                                                                            cTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAGCAGCACATCCCGTCAGCCGAAATGATACTc   <  4:285969/149‑1 (MQ=255)                                                                                                                               ccggTTCTCCTGGGGTGGCCTTAGCGCCGGAATCCCCGGTCATACATTGTATGGCAACGGCGGTTGGACACCTTCCGTCGTAGGAGCGGTTTTACGCGCGAAGAGGCCAGTACCAGCAGCACATCCCGTCAGCCGAAACGATACTcc  <  4:84944/144‑1 (MQ=255)                                                                                                                                                   ttttCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAGCAGCACATCCCGTCAGc                <  8:281526/113‑1 (MQ=255)                                                                                                                                                   ttttCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAGCAGCACATCCCGTCAGc                >  7:281526/1‑113 (MQ=255)                                                                                                                                                     |                                                                                                                             CGAAGCCTCGGCCATCGAATGGTCCGGTCAGGCGCCGCGGCTGGTGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAGCAGCACATCCCGTCAGCCGAAACGATACTCC  >  NC_002947/1811267‑1811539

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.