| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2050595 | 19 (0.320) | 3 (0.070) | 3/182 | NT | 14.1% | intergenic (‑88/+87) | PP_1824/PP_1825 | Smr domain‑containing protein/hypothetical protein |
| ? | NC_002947 | = 2050631 | 23 (0.550) | intergenic (‑124/+51) | PP_1824/PP_1825 | Smr domain‑containing protein/hypothetical protein | |||||
GGATCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCG > NC_002947/2050450‑2050741 | ggATCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACggg < 2:270474/149‑1 (MQ=255)ggATCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AAACCGCTCGTACggg > 3:325502/1‑149 (MQ=255) cGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTGGTCTTGCATGATGCCTCGACGTTGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGAt < 7:313383/148‑1 (MQ=255) cTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTca > 6:378197/1‑149 (MQ=255) cTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTca < 6:243779/149‑1 (MQ=255) aCGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTcaca > 3:120396/1‑147 (MQ=255) gcACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTCACAGAGCCCGaa < 4:17279/149‑1 (MQ=255) gggAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgta > 5:250308‑M2/1‑146 (MQ=255) gAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtagg < 8:42148‑M1/149‑42 (MQ=255) gAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTGACAGCGCCCGAAGCCGGCGGGGTGCCTggagg < 8:213413‑M2/149‑6 (MQ=255) aaaTCGTCGTCTTGCAAGCTGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGGAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagc > 3:305248‑M2/1‑141 (MQ=255) tcgtcgTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcggg > 5:103193‑M2/1‑138 (MQ=255) gtcgtcTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggt > 5:142807‑M2/1‑136 (MQ=255) tcgtcTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTca < 8:114578/109‑1 (MQ=255) tcgtcTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTca > 7:114578/1‑109 (MQ=255) tcgtcTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgg < 6:121601‑M2/145‑11 (MQ=255) tcgtcTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgg > 5:121601‑M2/1‑135 (MQ=255) gCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTGACAGAGCCCGAAGCCGGCGGGGGGGCTgttggagcgggttgacccgc < 2:285392‑M2/148‑21 (MQ=255) gCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGGG‑AACCCGCGCCGACGGGGGTGTCCCCGACCCCCCAGGCGGCGGGGGGGCGGGAGGAGCCGGTTGAccccgg > 2:27438/1‑146 (MQ=255) atgatgCCTCCACGTAGGCGGGTTAGTTTACGCGACTGTGGGGCGTTGTGCAGCCTGTGCGGGCCTCTTCGGGGGTG‑AACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcacccgcgaa > 4:120396‑M2/1‑126 (MQ=255) gatgCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGGAGCGACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCGGgtaggagccggttcccccgcgaa < 5:389621‑M2/147‑24 (MQ=255) gCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtag < 7:21606‑M1/125‑41 (MQ=255) gCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtag > 8:21606‑M1/1‑85 (MQ=255) ccgccccGTCGGCGGCGTAGTTTCCGCGACTGGGGGGCGGGGTGCAGCCTGTGCGGGCCTCTTCGCGGGTC‑AACCCGCTCCTACGGGCAGGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAgg < 5:276926/141‑1 (MQ=38) cggcgTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggt < 3:254362‑M2/120‑13 (MQ=255) tACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTGACCCGCGAAGAGGCCCGCACAGGGTACGCAAAACCAt > 5:100500/1‑149 (MQ=255) cgggggggCGGTGTGCCGCCTGTGCGGCCCCCTCCCCGGGTC‑CCCCCGCTCCTCCGGGGATGCCACAGCCCCCGACGCCGGCGGGGGGCCTGTCGCAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGt < 6:291683/145‑1 (MQ=255) cAGCCGGTGGGGGCCTCTGCG‑GGGTGCAACCGGCTCCTACGGGGATGTCACAGAGCCCCACGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGt < 6:100500/149‑1 (MQ=38) gCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTgc < 5:378197/149‑1 (MQ=255) ggggCGGCCCGCTGCGCGGGTC‑AACCCGCTCCTACGGGGATGTCCCAGAGCCCGAAGCCGGCGGGGTGCCTGTAGGCGCGGGTCCACCCGCGAAGAGGCCCGCACAGGCTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTgcggc < 7:213413/146‑1 (MQ=255) ttCGCGGGTG‑AACCCGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccccgaagaggcccgcacaggctgcacaacgccccacagtcgcgtaaactaacccgcctacgtggaggcatcat > 4:120396‑M1/1‑23 (MQ=255) ttCGCGGGGG‑AACCGGCTCCTACccgcaccccgccgtcttcgggctctgtgacatccccgtcgctccgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatc < 5:389621‑M1/147‑125 (MQ=255) gcgGGTC‑AACCCGCTCCAACagcccccccgccggcttcgggctctgtcacatccccgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgc < 2:285392‑M1/148‑129 (MQ=255) gTG‑AACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTcccgcc > 7:190309/1‑149 (MQ=255) ccccGCGCCTAGGGGGAGGCCACCCACCCCCAACACGGGGGGGGCCCTGTAGGCGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCcgcg < 1:27438/148‑1 (MQ=37) aCCCGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaagacgac > 5:142807‑M1/1‑12 (MQ=255) aCCCGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccg < 3:254362‑M1/120‑109 (MQ=255) cccGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaagacgacga > 5:103193‑M1/1‑11 (MQ=255) cccGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCgcgg > 2:252444/1‑149 (MQ=255) cccGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCgcgg > 2:76614/1‑149 (MQ=255) ccGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaagacga < 6:121601‑M1/145‑136 (MQ=255) ccGCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaagacga > 5:121601‑M1/1‑10 (MQ=255) gCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcgaagaggcccgcacaggctccacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcagcttgcaagacgacgattt > 3:305248‑M1/1‑8 (MQ=255) gCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGgcgc < 8:190309/149‑1 (MQ=255) ccTCCaggcaccccgccggcttcgggcgctgtcacatccccgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaagacgacgatttttc < 8:213413‑M1/149‑145 (MQ=255) ccTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaagacgacgatttttc < 8:42148‑M2/149‑109 (MQ=255) cTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggc < 7:21606‑M2/125‑86 (MQ=255) cTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggc > 8:21606‑M2/1‑40 (MQ=255) cTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCttcttc > 7:322842/1‑106 (MQ=255) cTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCttcttc < 8:322842/106‑1 (MQ=255) tACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaagacgacgatttttccc > 5:250308‑M1/1‑3 (MQ=255) | GGATCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCG > NC_002947/2050450‑2050741 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |