New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2050595	19 (0.320)	3 (0.070)	3/182	NT	14.1%	intergenic (‑88/+87)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
	?	NC_002947	= 2050631	23 (0.550)					intergenic (‑124/+51)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein

GGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCGGATACGGCTGCGCCGCCAGAAACGCACGCCCA  >  NC_002947/2050486‑2050773                                                                                                                                                   |                                                                                                                                               gggAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgta                                                                                                                                             >  5:250308‑M2/1‑146 (MQ=255)   gAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTGACAGCGCCCGAAGCCGGCGGGGTGCCTggagg                                                                                                                                           <  8:213413‑M2/149‑6 (MQ=255)      aaaTCGTCGTCTTGCAAGCTGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGGAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagc                                                                                                                                        >  3:305248‑M2/1‑141 (MQ=255)         tcgtcgTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcggg                                                                                                                                     >  5:103193‑M2/1‑138 (MQ=255)           gtcgtcTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggt                                                                                                                                    >  5:142807‑M2/1‑136 (MQ=255)            tcgtcTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgg                                                                                                                                      >  5:121601‑M2/1‑135 (MQ=255)            tcgtcTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgg                                                                                                                                      <  6:121601‑M2/145‑11 (MQ=255)                   gCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTGACAGAGCCCGAAGCCGGCGGGGGGGCTgttggagcgggttgacccgc                                                                                                                            <  2:285392‑M2/148‑21 (MQ=255)                   gCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGGG‑AACCCGCGCCGACGGGGGTGTCCCCGACCCCCCAGGCGGCGGGGGGGCGGGAGGAGCCGGTTGAccccgg                                                                                                                           >  2:27438/1‑146 (MQ=255)                     atgatgCCTCCACGTAGGCGGGTTAGTTTACGCGACTGTGGGGCGTTGTGCAGCCTGTGCGGGCCTCTTCGGGGGTG‑AACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcacccgcgaa                                                                                                                         >  4:120396‑M2/1‑126 (MQ=255)                       gatgCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGGAGCGACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCGGgtaggagccggttcccccgcgaa                                                                                                                         <  5:389621‑M2/147‑24 (MQ=255)                           ccgccccGTCGGCGGCGTAGTTTCCGCGACTGGGGGGCGGGGTGCAGCCTGTGCGGGCCTCTTCGCGGGTC‑AACCCGCTCCTACGGGCAGGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAgg                                                                                                                     <  5:276926/141‑1 (MQ=38)                                       cggcgTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggt                                                                                                                                    <  3:254362‑M2/120‑13 (MQ=255)                                                 tACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTGACCCGCGAAGAGGCCCGCACAGGGTACGCAAAACCAt                                                                                             >  5:100500/1‑149 (MQ=255)                                                        cgggggggCGGTGTGCCGCCTGTGCGGCCCCCTCCCCGGGTC‑CCCCCGCTCCTCCGGGGATGCCACAGCCCCCGACGCCGGCGGGGGGCCTGTCGCAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGt                                                                                      <  6:291683/145‑1 (MQ=255)                                                                       cAGCCGGTGGGGGCCTCTGCG‑GGGTGCAACCGGCTCCTACGGGGATGTCACAGAGCCCCACGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGt                                                                       <  6:100500/149‑1 (MQ=38)                                                                         gCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTgc                                                                     <  5:378197/149‑1 (MQ=255)                                                                            ggggCGGCCCGCTGCGCGGGTC‑AACCCGCTCCTACGGGGATGTCCCAGAGCCCGAAGCCGGCGGGGTGCCTGTAGGCGCGGGTCCACCCGCGAAGAGGCCCGCACAGGCTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTgcggc                                                                  <  7:213413/146‑1 (MQ=255)                                                                                               gTG‑AACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTcccgcc                                               >  7:190309/1‑149 (MQ=255)                                                                                                    ccccGCGCCTAGGGGGAGGCCACCCACCCCCAACACGGGGGGGGCCCTGTAGGCGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCcgcg                                           <  1:27438/148‑1 (MQ=37)                                                                                                     cccGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCgcgg                                          >  2:76614/1‑149 (MQ=255)                                                                                                     cccGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCgcgg                                          >  2:252444/1‑149 (MQ=255)                                                                                                        gCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGgcgc                                       <  8:190309/149‑1 (MQ=255)                                                                                                           ccTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaagacgacgatttttc                                    <  8:42148‑M2/149‑109 (MQ=255)                                                                                                            cTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggc                                                           <  7:21606‑M2/125‑86 (MQ=255)                                                                                                            cTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggc                                                           >  8:21606‑M2/1‑40 (MQ=255)                                                                                                            cTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCttcttc                                                                              >  7:322842/1‑106 (MQ=255)                                                                                                            cTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCttcttc                                                                              <  8:322842/106‑1 (MQ=255)                                                                                                                         acaGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCGGATACGGCTgcg                      >  2:354083/1‑149 (MQ=255)                                                                                                                            gagCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAGCCGTATCCGCTTGcgccg                   <  4:61333/149‑1 (MQ=39)                                                                                                                            gagCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCGGATACGGCTGcgccg                   >  7:38699/1‑149 (MQ=255)                                                                                                                               cccGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCGGATACGGCTGcgccgc                  >  3:271198/1‑147 (MQ=255)                                                                                                                                  gAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCGGATACGGCTGCGCCGCCAGa              >  4:333717/1‑148 (MQ=255)                                                                                                                                  gAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCGGATACGGCTGCGCCGCCAGa              >  7:314681/1‑148 (MQ=255)                                                                                                                                       cggcggGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCGGATACGGCTGCGCCGCCAGAAacgca        >  4:320405/1‑149 (MQ=255)                                                                                                                                          cggGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCGGATACGGCTGCGCCGCCAGAAacgcacgc     >  4:366186/1‑149 (MQ=255)                                                                                                                                             ggTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCGGATACGGCTGCGCCGCCAGAAACGCACGCCCa  <  1:354083/149‑1 (MQ=255)                                                                                                                                              gTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGc                                                                                                     <  5:118183/49‑1 (MQ=255)                                                                                                                                              gTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGc                                                                                                     >  6:118183/1‑49 (MQ=255)                                                                                                                                                   |                                                                                                                                               GGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCGGATACGGCTGCGCCGCCAGAAACGCACGCCCA  >  NC_002947/2050486‑2050773

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.