New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2380251 =	52 (0.880)	4 (0.070)	4/240	NT	7.9%	intergenic (+26/‑86)	PP_2088/oprF	RNA polymerase sigma factor SigX/porin F
	?	NC_002947	2380275 =	44 (0.790)					intergenic (+50/‑62)	PP_2088/oprF	RNA polymerase sigma factor SigX/porin F

CAGAGCTGGAGTTCCAGGAAATTGCCGACATCATGCACATGGGCCTGAGCGCGACGAAAATGCGTTACA‑AGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTGGTTCGCTTGTAGCCGCCACTTCGATTGGC  >  NC_002947/2380104‑2380399                                                                                                                                                     |                                                                                                                                                     gcgccttgaccttgtgccatagcgccaatcgaagtggcggctacaagcgaaccaatggccaagcccaaggtgtttttcagtttcatccgttaaatccccatctggtgatagttaagcagtcccaccacaaacaagagggacaactcgac                                                                                                                                                      <  3:147711‑M1/1‑1 (MQ=255) gcgccttgaccttgtgccatagcgccaatcgaagtggcggctacaagcgaaccaatggccaagcccaaggtgtttttcagtttcatccgttaaatccccatctggtgatagttaagcagtcccaccacaaacaagagggacaactcgac                                                                                                                                                      <  2:12399‑M1/1‑1 (MQ=255)  agagCTGGAGTTCCAGGAAATTGCCGACATCATGCACATGGGCCTGAGCGCGACGAAAATGCGTTACA‑AGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTAGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCgg                                                                                                                                                    >  4:237555/1‑149 (MQ=255)           gTTCCAGGAAATTGCTGACATCATGCACATGGGCCTGAGCGCGACGAAAATGCGTTACA‑AGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTg                                                                                                                                           >  4:38290/1‑149 (MQ=255)               cAGGAAATTGCCGACATCATGCACATGGGCCTGAGCGCGACGAAAATGCGTTACAGAGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGAGAGTTCTGc                                                                                                                                          >  1:294546/1‑147 (MQ=255)                aGGAAATTGCCGACATCATGCACATGGGCCTGAGCGCGACGAAAATGCGTTACA‑AGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAg                                                                                                                                       >  3:35978/1‑148 (MQ=255)                 ggAAATTGCCGACATCATGCACATGGGCCTGAGCGCGACGAAAATGCGTTACA‑CGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTAGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCTGCGAGTGCTGCTAGAc                                                                                                                                     >  2:342278/1‑149 (MQ=255)                 ggAAATTGCCGACATCATGCACATGGGCCTGAGCGCGACGAAAATGCGTTACA‑AGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGAc                                                                                                                                     >  7:129697/1‑149 (MQ=255)                         ccGACATCATGCACATGGGCCTGAGCGCGACGAAAATGCGTTACA‑AGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTc                                                                                                                             <  4:230174/149‑1 (MQ=255)                          cGACATCATGCACATGGGCCTGAGCGCGACGAAAATGCGTTACA‑AGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTc                                                                                                                             >  4:277574/1‑148 (MQ=255)                              atcatGCACATGGGCCTGAGCGCGACGAAAATGCGTTACA‑AGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGtt                                                                                                                        <  2:294546/149‑1 (MQ=255)                               tcatGCACATGGGCCTGAGCGCGACGAAAATGCGTTACA‑AGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTg                                                                                                                       >  5:83199/1‑149 (MQ=255)                               gaagtggcggctacaagcgaaccaatggccaagcccaaggtgtttttcagtttcatccgttaaatccccatctggtgatagttaagcagtcccaccacaaacaagagggacaactcgaCGGCGAGTTCTGCTAGACTCGCCGTCGAGtt                                                                                                                        <  1:95195‑M1/31‑1 (MQ=255)                                   gCACATGGGCCTGAGCGCGACGAAAATGCGTTACA‑AGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTccc                                                                                                                   >  2:365134/1‑149 (MQ=255)                                    cacaTGGGCCTGAGCGCGACGAAAATGCGTTACA‑AGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCct                                                                                                                  <  3:277574/149‑1 (MQ=255)                                     acaTGGACCTGAGCGCGACGAAAATGCGTTACA‑AGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTACctc                                                                                                                 >  8:145637/1‑149 (MQ=255)                                           gCCTGAGCGCGACGAAAATGCGTTACA‑AGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCg                                                                                                                            >  4:336411/1‑132 (MQ=255)                                           gCCTGAGCGCGACGAAAATGCGTTACA‑AGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCg                                                                                                                            <  3:336411/132‑1 (MQ=255)                                                    cgacgaAAATGCGTTACA‑ACCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGa                                                                                                  <  2:79135/149‑1 (MQ=255)                                                          aaaTGCGTTACA‑AGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGACCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCtt                                                                                            <  6:111858/149‑1 (MQ=255)                                                            aTGCGTTACA‑AGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTaa                                                                                          <  3:119860/149‑1 (MQ=255)                                                               cGTTACA‑AGGGCGCGCTAGACAAGCTTCGGGACAAATTTGCCGGCCGTGACGAAACTTAGTGGCTTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCGGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACt                                                                                        <  3:337186/148‑1 (MQ=255)                                                               cGTTACA‑AGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTa                                                                                       <  6:83199/149‑1 (MQ=255)                                                                gTTACA‑AGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCTTCTTGTTTGTGGTGGGACTGCTTAACTAt                                                                                      >  1:175156/1‑149 (MQ=255)                                                                 ttACA‑AGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTAt                                                                                      >  3:262568/1‑148 (MQ=255)                                                                    cA‑AGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCAc                                                                                   <  4:262568/148‑1 (MQ=255)                                                                        gcgcgcgcTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCAc                                                                                   >  1:12399/1‑145 (MQ=255)                                                                          gcgcgcTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATg                                                                             <  3:237555/149‑1 (MQ=255)                                                                                  gACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGAtt                                                                       <  8:129697/147‑1 (MQ=255)                                                                                  gACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGACGTCGAGTTGTCCATCTTGTTTGTGGTTGGACTGCTTAACTATAACCAGATGGGGAttt                                                                      >  8:349558/1‑148 (MQ=255)                                                                                    cAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAAc                                                                   <  3:38290/149‑1 (MQ=255)                                                                                     aaGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCTTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACg                                                                  <  2:175156/149‑1 (MQ=255)                                                                                     aaGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACg                                                                  >  7:294011/1‑149 (MQ=255)                                                                                        cgttaaatccccatctggtgatagttaagcagtcccaccacaaacaagagggacaactcgaCGGCGAGTTCTGCTAGACTCGCCGTc                                                                                                                             >  1:81217‑M1/62‑87 (MQ=255)                                                                                        cgttaaatccccatctggtgatagttaagcagtcccaccacaaacaagagggacaactcgaCGGCGAGTTCTGCTAGACTCGCCGTc                                                                                                                             <  2:81217‑M1/26‑1 (MQ=255)                                                                                        cTTCGGGAGAAATTTGCCGGCCTTGATGATACTTAGTGGCGTGCAATTATCTCTTACGAAGCGGCTAGTTCTGGTAGTCTCGCCGTCGAGTTGTCGCTGTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACggct                                                               <  6:208095/149‑3 (MQ=255)                                                                                         ttCGGGAGAAATTTGACGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGCGGATTTAACGGAt                                                               >  4:135132/1‑148 (MQ=255)                                                                                             ggAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCATGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAAc                                                          >  1:371090/1‑149 (MQ=255)                                                                                              gagaAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACt                                                         >  2:60262/1‑149 (MQ=255)                                                                                                      tGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGTGACTGCTTAACTATCACCAGTAGGGGATTTAACGGATGAAACTGAAAAac                                                  <  1:214551/148‑1 (MQ=255)                                                                                                          ggCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCtt                                             >  4:364772/1‑149 (MQ=255)                                                                                                             cTTGATGAAACTTAGTGGCTTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTggg                                          <  3:289372/149‑1 (MQ=255)                                                                                                             cTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTggg                                          >  3:131121/1‑149 (MQ=255)                                                                                                              ttGATGAAACTTAGTGGCGTGCAAATATCTATAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTCGGc                                         >  6:329490/1‑149 (MQ=255)                                                                                                                gatgaAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGc                                         <  3:364772/147‑1 (MQ=255)                                                                                                                gatgaAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCtt                                       >  3:229184/1‑149 (MQ=255)                                                                                                                 atgaTACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCtt                                       <  1:342278/148‑1 (MQ=255)                                                                                                                   taaaCTTAGTGGCGTGCAAATATCTCTAAAGTACCGGCGAGTTCTGCTAGACTCGCCGTAGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTgg                                     <  8:294011/147‑1 (MQ=255)                                                                                                                    aaaCTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCATGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGc                                    <  2:371090/148‑1 (MQ=255)                                                                                                                        ttAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTg                               <  7:145637/149‑1 (MQ=255)                                                                                                                         tAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTgg                              >  6:2348/1‑149 (MQ=255)                                                                                                                         cccaccacaaacaagagggacaactcgaCGGCGAGTCTAGCAGAACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTgg                              <  2:95195‑M1/121‑1 (MQ=255)                                                                                                                          aGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCAt                                 <  7:349558/145‑1 (MQ=255)                                                                                                                              gCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTGGTTCGc                         <  1:365134/149‑1 (MQ=255)                                                                                                                              gCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTGGTTCGc                         <  4:35978/149‑1 (MQ=255)                                                                                                                                gTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTGGTTCGCtt                       <  1:60262/149‑1 (MQ=255)                                                                                                                                           tctAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTGGTTCGCTTGTAGCCGCCAc            >  8:42344/1‑149 (MQ=255)                                                                                                                                           tctAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTGGTTCGCTTGTAGCCGCCAc            >  4:147711/1‑149 (MQ=255)                                                                                                                                               aCGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTGGTTCGCTTGTAGCCGCCACTTc         >  3:360648/1‑148 (MQ=255)                                                                                                                                                    ccGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTGGTTCGCTTGTAGCCGCCACTTCGATTgg   <  4:360648/149‑1 (MQ=255)                                                                                                                                                     CGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTGGTTCGCTTGTAGCCGCCACTTCGATTGgc  >  5:2348‑M1/1‑149 (MQ=255)                                                                                                                                                     CGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACATTGGGCTTGGCAATTGGTTAGATTGTAGACACCAATTCTATTGgc  <  7:157921‑M1/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     CAGAGCTGGAGTTCCAGGAAATTGCCGACATCATGCACATGGGCCTGAGCGCGACGAAAATGCGTTACA‑AGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTGGTTCGCTTGTAGCCGCCACTTCGATTGGC  >  NC_002947/2380104‑2380399

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.