New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2380251 =	52 (0.880)	4 (0.070)	4/240	NT	7.9%	intergenic (+26/‑86)	PP_2088/oprF	RNA polymerase sigma factor SigX/porin F
	?	NC_002947	2380275 =	44 (0.790)					intergenic (+50/‑62)	PP_2088/oprF	RNA polymerase sigma factor SigX/porin F

CCGACATCATGCACATGGGCCTGAGCGCGACGAAAATGCGTTACAAGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTGGTTCGCTTGTAGCCGCCACTTCGATTGGCGCTATGGCACAAGGTCAAGGCGC  >  NC_002947/2380128‑2380422                                                                                                                                                    |                                                                                                                                                    ccGACATCATGCACATGGGCCTGAGCGCGACGAAAATGCGTTACAAGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTc                                                                                                                                                    <  4:230174/149‑1 (MQ=255)  cGACATCATGCACATGGGCCTGAGCGCGACGAAAATGCGTTACAAGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTc                                                                                                                                                    >  4:277574/1‑148 (MQ=255)      gaagtggcggctacaagcgaaccaatggccaagcccaaggtgtttttcagtttcatccgttaaatccccatctggtgatagttaagcagtcccaccacaaacaagagggacaactcgaCGGCGAGTTCTGCTAGACTCGCCGTCGAGtt                                                                                                                                               <  1:95195‑M1/31‑1 (MQ=255)      atcatGCACATGGGCCTGAGCGCGACGAAAATGCGTTACAAGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGtt                                                                                                                                               <  2:294546/149‑1 (MQ=255)       tcatGCACATGGGCCTGAGCGCGACGAAAATGCGTTACAAGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTg                                                                                                                                              >  5:83199/1‑149 (MQ=255)           gCACATGGGCCTGAGCGCGACGAAAATGCGTTACAAGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTccc                                                                                                                                          >  2:365134/1‑149 (MQ=255)            cacaTGGGCCTGAGCGCGACGAAAATGCGTTACAAGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCct                                                                                                                                         <  3:277574/149‑1 (MQ=255)             acaTGGACCTGAGCGCGACGAAAATGCGTTACAAGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTACctc                                                                                                                                        >  8:145637/1‑149 (MQ=255)                   gCCTGAGCGCGACGAAAATGCGTTACAAGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCg                                                                                                                                                   >  4:336411/1‑132 (MQ=255)                   gCCTGAGCGCGACGAAAATGCGTTACAAGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCg                                                                                                                                                   <  3:336411/132‑1 (MQ=255)                           ccaatggccaagcccaaggtgtttttcagtttcatccgttaaatccccatctggtgatagttaagcagtcccaccacaaacaagagggacaactcgacggcgagttctgctagactcgccgTCGAGTTGTCCCTCTTGTTTGTGGTggg                                                                                                                          <  2:95195‑M2/28‑1 (MQ=255)                            cgacgaAAATGCGTTACAACCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGa                                                                                                                         <  2:79135/149‑1 (MQ=255)                                  aaaTGCGTTACAAGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGACCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCtt                                                                                                                   <  6:111858/149‑1 (MQ=255)                                    aTGCGTTACAAGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTaa                                                                                                                 <  3:119860/149‑1 (MQ=255)                                       cGTTACAAGGGCGCGCTAGACAAGCTTCGGGACAAATTTGCCGGCCGTGACGAAACTTAGTGGCTTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCGGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACt                                                                                                               <  3:337186/148‑1 (MQ=255)                                       cGTTACAAGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTa                                                                                                              <  6:83199/149‑1 (MQ=255)                                        gTTACAAGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCTTCTTGTTTGTGGTGGGACTGCTTAACTAt                                                                                                             >  1:175156/1‑149 (MQ=255)                                         ttACAAGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTAt                                                                                                             >  3:262568/1‑148 (MQ=255)                                            cAAGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCAc                                                                                                          <  4:262568/148‑1 (MQ=255)                                               gcgcgcgcTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCAc                                                                                                          >  1:12399/1‑145 (MQ=255)                                                 gcgcgcTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATg                                                                                                    <  3:237555/149‑1 (MQ=255)                                                         gACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGAtt                                                                                              <  8:129697/147‑1 (MQ=255)                                                         gACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGACGTCGAGTTGTCCATCTTGTTTGTGGTTGGACTGCTTAACTATAACCAGATGGGGAttt                                                                                             >  8:349558/1‑148 (MQ=255)                                                           cAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAAc                                                                                          <  3:38290/149‑1 (MQ=255)                                                            aaGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCTTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACg                                                                                         <  2:175156/149‑1 (MQ=255)                                                            aaGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACg                                                                                         >  7:294011/1‑149 (MQ=255)                                                               cgttaaatccccatctggtgatagttaagcagtcccaccacaaacaagagggacaactcgaCGGCGAGTTCTGCTAGACTCGCCGTc                                                                                                                                                    <  2:81217‑M1/26‑1 (MQ=255)                                                               cgttaaatccccatctggtgatagttaagcagtcccaccacaaacaagagggacaactcgaCGGCGAGTTCTGCTAGACTCGCCGTc                                                                                                                                                    >  1:81217‑M1/62‑87 (MQ=255)                                                               cTTCGGGAGAAATTTGCCGGCCTTGATGATACTTAGTGGCGTGCAATTATCTCTTACGAAGCGGCTAGTTCTGGTAGTCTCGCCGTCGAGTTGTCGCTGTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACggct                                                                                      <  6:208095/149‑3 (MQ=255)                                                                ttCGGGAGAAATTTGACGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGCGGATTTAACGGAt                                                                                      >  4:135132/1‑148 (MQ=255)                                                                    ggAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCATGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAAc                                                                                 >  1:371090/1‑149 (MQ=255)                                                                     gagaAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACt                                                                                >  2:60262/1‑149 (MQ=255)                                                                             tGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGTGACTGCTTAACTATCACCAGTAGGGGATTTAACGGATGAAACTGAAAAac                                                                         <  1:214551/148‑1 (MQ=255)                                                                                 ggCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCtt                                                                    >  4:364772/1‑149 (MQ=255)                                                                                    cTTGATGAAACTTAGTGGCTTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTggg                                                                 <  3:289372/149‑1 (MQ=255)                                                                                    cTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTggg                                                                 >  3:131121/1‑149 (MQ=255)                                                                                     ttGATGAAACTTAGTGGCGTGCAAATATCTATAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTCGGc                                                                >  6:329490/1‑149 (MQ=255)                                                                                       gatgaAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGc                                                                <  3:364772/147‑1 (MQ=255)                                                                                       gatgaAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCtt                                                              >  3:229184/1‑149 (MQ=255)                                                                                        atgaTACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCtt                                                              <  1:342278/148‑1 (MQ=255)                                                                                          taaaCTTAGTGGCGTGCAAATATCTCTAAAGTACCGGCGAGTTCTGCTAGACTCGCCGTAGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTgg                                                            <  8:294011/147‑1 (MQ=255)                                                                                           aaaCTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCATGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGc                                                           <  2:371090/148‑1 (MQ=255)                                                                                               ttAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTg                                                      <  7:145637/149‑1 (MQ=255)                                                                                                tAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTgg                                                     >  6:2348/1‑149 (MQ=255)                                                                                                cccaccacaaacaagagggacaactcgaCGGCGAGTCTAGCAGAACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTgg                                                     <  2:95195‑M1/121‑1 (MQ=255)                                                                                                 aGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCAt                                                        <  7:349558/145‑1 (MQ=255)                                                                                                     gCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTGGTTCGc                                                <  4:35978/149‑1 (MQ=255)                                                                                                     gCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTGGTTCGc                                                <  1:365134/149‑1 (MQ=255)                                                                                                       gTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTGGTTCGCtt                                              <  1:60262/149‑1 (MQ=255)                                                                                                                  tctAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTGGTTCGCTTGTAGCCGCCAc                                   >  4:147711/1‑149 (MQ=255)                                                                                                                  tctAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTGGTTCGCTTGTAGCCGCCAc                                   >  8:42344/1‑149 (MQ=255)                                                                                                                     aactcgacggcgagtctagcagaactcgccgTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTGGTTCGCTTGTAGCCGCCACTTc                                <  1:95195‑M2/118‑1 (MQ=255)                                                                                                                      aCGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTGGTTCGCTTGTAGCCGCCACTTc                                >  3:360648/1‑148 (MQ=255)                                                                                                                          gacggcgagtctagcagaactcgccgTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACg                                                                                         >  1:81217‑M2/27‑87 (MQ=255)                                                                                                                          gacggcgagtctagcagaactcgccgTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACg                                                                                         <  2:81217‑M2/61‑1 (MQ=255)                                                                                                                           ccGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTGGTTCGCTTGTAGCCGCCACTTCGATTgg                          <  4:360648/149‑1 (MQ=255)                                                                                                                            CGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTGGTTCGCTTGTAGCCGCCACTTCGATTGgc                         >  5:2348‑M1/1‑149 (MQ=255)                                                                                                                            CGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACATTGGGCTTGGCAATTGGTTAGATTGTAGACACCAATTCTATTGgc                         <  7:157921‑M1/149‑1 (MQ=255)                                                                                                                                        cTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTGGTTCGCTTGTAGCCGCCACTTCGATTGGCGCTAt                    >  4:30423/1‑142 (MQ=255)                                                                                                                                        cTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTGGTTCGCTTGTAGCCGCCACTTCGATTGGCGCTAt                    <  3:30423/142‑1 (MQ=255)                                                                                                                                           gACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTGGTTCGCTTGTAGCCGCCACTTCGATTGGCGCTATGGCACAAg            <  5:329490/147‑1 (MQ=255)                                                                                                                                                   gTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTGGTTCGCTTGTAGCCGCCACTTCGATTGGCGCTATGGCACAAGGTCAAGgcgc  <  2:12399‑M2/148‑1 (MQ=255)                                                                                                                                                   gTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTGGTTCGCTTGTAGCCGCCACTTCGATTGGCGCTATGGCACAAGGTCAAGgcgc  <  3:147711‑M2/148‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                    CCGACATCATGCACATGGGCCTGAGCGCGACGAAAATGCGTTACAAGCGCGCGCTAGACAAGCTTCGGGAGAAATTTGCCGGCCTTGATGAAACTTAGTGGCGTGCAAATATCTCTAACGAACCGGCGAGTTCTGCTAGACTCGCCGTCGAGTTGTCCCTCTTGTTTGTGGTGGGACTGCTTAACTATCACCAGATGGGGATTTAACGGATGAAACTGAAAAACACCTTGGGCTTGGCCATTGGTTCGCTTGTAGCCGCCACTTCGATTGGCGCTATGGCACAAGGTCAAGGCGC  >  NC_002947/2380128‑2380422

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.