New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3905311	56 (0.950)	3 (0.060)	3/236	NT	5.6%	coding (13/432 nt)	PP_3447	membrane protein
	?	NC_002947	= 3905366	49 (0.900)					intergenic (‑43/‑150)	PP_3447/nfrB	membrane protein/bacteriophage N4 receptor inner membrane subunit

TTCCAGCTCATCGCGATGCCTGACATCAGCACCGACAGCACGGTCGACTGCGCCATGCCGGCGCCGAACGCCAGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGAAATTTGGACAATCCCGCGTTCGGCTGCTTGTATCTATTCCGTACATGACAGTGACATCTCCTGCAC  >  NC_002947/3905169‑3905452                                                                                                                                               |                                                                                                                                               ttCCAGCTCATCGCGATGCCTGACATCAGCACCGACAGCACGGTCGACTGCGCCATGCCGGCGCCGAACGCCAGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTAcc                                                                                                                                          >  5:212399/1‑149 (MQ=255)    cAGCTCATCGCGATGCCTGACATCAGCACCGACAGCACGGTCGACTGCGCCATGCCGTCGCCGAACGCCAGCACCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTTCCGGCCTTACCtt                                                                                                                                        >  8:311931/1‑148 (MQ=255)      gCTCATCGCGATGCCTGACATCAGCACCGACAGCACGGTCGACTGCGCCATGCCGGCGCCGAACGCCAGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCa                                                                                                                                     <  4:351074/149‑1 (MQ=255)          aTCGCGATGCCTGACATCAGCACCGACAGCACGGTCGACTGCGCCATGCCGGCGCCGAACGCCAGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGtt                                                                                                                                 >  8:288715/1‑149 (MQ=255)          aTCGCGATGCCTGACATCAGCACCGACAGCACGGTCGACTGCGCCATGCCGGCGCCGAACGCCAGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGt                                                                                                                                  >  6:63917/1‑148 (MQ=255)           tCGCGATGCCTGACATCAGCACCGACAGCACGGTCGACTGCGCCATGCCGGCGCCGAACGCCAGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTc                                                                                                                                <  8:18130/149‑1 (MQ=255)                   ccTGACATCAGCACCGACAGCACGGTCGACTGCGCCATGCCGGCGCCGAACGCCAGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCt                                                                                                                        <  6:212399/149‑1 (MQ=255)                    cTGACATCAGCACCGACAGCACGGTCGACTGCGCCATGCCGGCGCCGAACGCCAGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCt                                                                                                                        <  4:367859/148‑1 (MQ=255)                    cTGACATCAGCACCGACAGCACGGTCGACTGCGCCATGCCGGCGCCGAACGCCAGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCt                                                                                                                        >  3:367859/1‑148 (MQ=255)                       aCATCAGCACCGACAGCACGGTCGACTGCGCCATGCCGGCGCCGAACGCCAGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCtgaat                                                                                                                    <  5:63917/149‑1 (MQ=255)                         aTCAGCACCGACAGCACGGTCGACTGCGCCATGCCGGCGCCGAACGCCAGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTc                                                                                                                                >  8:334574/1‑135 (MQ=255)                         aTCAGCACCGACAGCACGGTCGACTGCGCCATGCCGGCGCCGAACGCCAGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTc                                                                                                                                <  7:334574/135‑1 (MQ=255)                            aGCACCGACAGCACGGTCGACTGCGCCATGCCGGCGCCGAACGCCAGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AAc                                                                                                               <  4:350415/148‑1 (MQ=255)                             gCACCGACAGCACGGTCGACTGCGCCATGCCGGCGCCGAACGCCAGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAg                                                                                                                              <  1:140273/133‑1 (MQ=255)                             gCACCGACAGCACGGTCGACTGCGCCATGCCGGCGCCGAACGCCAGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAg                                                                                                                              >  2:140273/1‑133 (MQ=255)                             gCACCGACAGCACGGTCGACTGCGCCATGCCGGCGCCGAACGCCAGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGa                                                                                                             >  2:88394/1‑149 (MQ=255)                                     aGCACGGTCGACTGCGCCATGCCGGCGCCGAACGCCAGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTaaa                                                                                                     <  3:38951/149‑1 (MQ=255)                                       cACGGTCGACTGCGCCATGCCGGCGCCGAACGCCAGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCtgcatcttgtagctttacaggtcgttcattcagggagctgaaca                                                                                                    >  2:221917‑M1/1‑105 (MQ=255)                                       cACGGTCGACTGCGCCATGCCGGCGCCGAACGCCAGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGc                                                                                                   >  7:346667/1‑149 (MQ=255)                                            tCGACTGCGCCATGCCGGCGCCGAACGCCAGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACaa                                                                                              <  3:132839/149‑1 (MQ=255)                                                     ccATGCCGGCGCCGAACGCCAGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AAc                                                                                                               >  4:76087/1‑123 (MQ=255)                                                     ccATGCCGGCGCCGAACGCCAGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AAc                                                                                                               <  3:76087/123‑1 (MQ=255)                                                          ccGGCGCCGAACGCCAGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCtgcatcttgtagctttacaggtcgttcattcaggtagctgaacatgcaaggtaaggcccgcaa                                                                                 <  1:140418‑M1/149‑64 (MQ=255)                                                          ccGGCGCCGAACGCCAGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCtgcatcttgtagctttacaggtcgttcattcagggagctgaacatgcaaggtaaggcccgca                                                                                  <  1:221917‑M1/148‑63 (MQ=255)                                                           cGGCGCCGAACGCCAGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAgcccgcaag                                                                               >  7:288715‑M2/1‑140 (MQ=255)                                                             gcgcCGAACGCCAGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAgcccgcaaga                                                                              <  4:141012‑M2/148‑11 (MQ=255)                                                                 cGAACGCCAGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAg                                                                         <  4:141406/149‑1 (MQ=255)                                                                        cAGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGaaa                                                                  >  2:288142/1‑149 (MQ=255)                                                                         aGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATGCAACGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGaaa                                                                  <  1:88394/149‑1 (MQ=255)                                                                            tCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGAAATTTg                                                              >  5:159120/1‑149 (MQ=255)                                                                            tCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACAACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGAAATTTg                                                              >  8:38779/1‑149 (MQ=255)                                                                                   cGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGAAATTTGGACAAt                                                        <  7:294590/148‑1 (MQ=255)                                                                                           acacaGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGAAATTTGGACAATCCCGCGTTc                                               >  8:304418/1‑149 (MQ=255)                                                                                           acacaGGCCACCGCGATGGCCTCATAGAGAATGGACTGGACGATCTTGCGGGCCTTACCATGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCAGCAAGAACCAGCCCGAAAATTGGACAATCCCGCGTTc                                               >  8:97384/1‑149 (MQ=255)                                                                                                     cGGCGATGGCCTCATAGAGAATGGTCTGGACGATGTTGCGGGCCTTACCTTTCATGTTCAGCTCCCTGAATG‑ATCGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGAAATTTGGACAATCCCGCGTTCGGCTGCTTGt                                     <  7:311931/149‑1 (MQ=255)                                                                                                       gCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGAAATTTGGACAATCCCGCGTTCGGCTGCTTGTa                                    >  2:73416/1‑148 (MQ=255)                                                                                                             gCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGAAATTTGGACAATCCCGCGTTCGGCTGCTTGTATCTAtt                              <  5:117465/148‑1 (MQ=255)                                                                                                               cTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGAAATTTGGACAATCCCGCGTTCGGCTGCTTGTATCTATTCCg                           <  7:304418/149‑1 (MQ=255)                                                                                                               cTCATAGAGAATGGCCAGGACGATCTTGCGGGCATTACCTTGCATGGTCAGCTCCATGAATG‑AACGACCTGTAAAGCTACAACATGCAGCCCGCAACAAACATCCCGAAATTTGGACTATCCCGCGTTCGGCTGCTGGTATCTATTcag                           >  6:177478/1‑147 (MQ=255)                                                                                                                  aTAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTcc                                                                                                                          >  4:174964/1‑52 (MQ=255)                                                                                                                  aTAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTcc                                                                                                                          <  3:174964/52‑1 (MQ=255)                                                                                                                  aTAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGAAATTTGGACAATCCCGCGTTCGGCTGCTTGTATCTATTCCGt                          <  1:73416/147‑1 (MQ=255)                                                                                                                  aTAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACAACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGAAATTTGGACAATCCCGCGTTCGGCTGCTTGTATCTATTCCGTa                         <  7:38779/148‑1 (MQ=255)                                                                                                                   tAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGAAATTTGGACAATCCCGCGTTCGGCTGCTTGTATCTATTCCGTACa                       >  5:140492/1‑149 (MQ=255)                                                                                                                   tAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGAAATTTGGACAATCCCGCGTTCGGCTGCTTGTATCTATTCCGTACa                       >  8:92618/1‑149 (MQ=255)                                                                                                                   tAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGAAATTTGGACAATCCCGCGTTCGGCTGCTTGTATCTATTCCGTACa                       >  8:147879/1‑149 (MQ=255)                                                                                                                   tAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGAAATTTGGACAATCCCGCGTTCGGCTGCTTGTATCTATTCCGTACa                       <  3:141012/149‑1 (MQ=255)                                                                                                                     gagaATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGAAATTTGGACAATCCCGCGTTCGGCTGCTTGTATCTATTCCGTACAt                      <  7:147879/148‑1 (MQ=255)                                                                                                                      agaATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGAAATTTGGACAATCCCGCGTTCGGCTGCTTGTATCTATTCCGTACATGa                    >  3:134268/1‑149 (MQ=255)                                                                                                                             ccTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGAAATTTGGACAATCCCGCGTTCGGCTGCTTGTATCTATTCCGTACATGACAGTGAc             <  1:288142/149‑1 (MQ=255)                                                                                                                              cTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGAAATTTGGACAATc                                                       >  5:278431/1‑106 (MQ=255)                                                                                                                              cTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGAAATTTGGACAATc                                                       <  6:278431/106‑1 (MQ=255)                                                                                                                                ggACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCCGCTAGAAACAGCCCGAAATATGGACAATCCCGCGTTCGGCTGCTTGTATCTATTCCGTACATGACAGTGACAtc          >  1:121554/1‑149 (MQ=255)                                                                                                                                 gACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGAAATTTGGACAATCCcgcg                                                  >  8:154264/1‑108 (MQ=255)                                                                                                                                 gACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGAAATTTGGACAATCCcgcg                                                  <  7:154264/108‑1 (MQ=255)                                                                                                                                  aCGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGAAATTTGGACAATCCCGCGTTCGGCTGCTTGTATCTATTCCCTa                         <  3:90138/132‑1 (MQ=255)                                                                                                                                  aCGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGAAATTTGGACAATCCCGCGTTCGGCTGCTTGTATCTATTCCATa                         >  4:90138/1‑132 (MQ=255)                                                                                                                                      tCTTGCGGGCtgcatcttgtagctttacaggtcgttcattcagggagctgaacatgcaaggtaaggcccgcaagatcgtccaggccattctctatgaggccatcgccgtcgcctgtgtggcgcccgcactggagctggcgttcggcgc      <  4:141012‑M1/148‑139 (MQ=255)                                                                                                                                      tCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGAAATTTGGACAATCCCGCGTTCGGCTGCTTGTATCTATTCCGTACATGACAGTGACATCTACTg     >  4:67229/1‑148 (MQ=255)                                                                                                                                       cTTGCGGGCtgcatcttgtagctttacaggtcgttcattcagggagctgaacatgcaaggtaaggcccgcaagatcgtccaggccattctctatgaggccatcgccgtcgcctgtgtggcgcccgcactggagctggcgttcggcgccg    >  7:288715‑M1/1‑9 (MQ=255)                                                                                                                                        ttGCGGGCCTTACCTTGCATGTTCAGCTACCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAgcccgcaagatcgtccaggccattctctatgaggccatcgccgtcgcctgtgtggcgcccgcactggagctggcgttcggcgccgg  <  1:140418‑M2/149‑87 (MQ=255)                                                                                                                                         tGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAgcccgcaagatcgtccaggccattctctatgaggccatcgccgtcgcctgtgtggcgcccgcactggagctggcgttcggcgccgg  <  1:221917‑M2/148‑87 (MQ=255)                                                                                                                                          gCGGGCCTTACCTTTCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGGCCGAAATTTGGACAATCCCGCGTTCGGCTGCTTGTATCTATTCCGTACATGACAGTGACATCTCCt      <  7:97384/143‑1 (MQ=255)                                                                                                                                          gCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGAAATTTGGACAATCCCGCGTTCGGCTGCTTGTATCTATTCCGTa                         <  3:95214/124‑1 (MQ=255)                                                                                                                                          gCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGAAATTTGGACAATCCCGCGTTCGGCTGCTTGTATCTATTCCGTa                         >  4:95214/1‑124 (MQ=255)                                                                                                                                               |                                                                                                                                               TTCCAGCTCATCGCGATGCCTGACATCAGCACCGACAGCACGGTCGACTGCGCCATGCCGGCGCCGAACGCCAGCTCCAGTGCGGGCGCCACACAGGCGACGGCGATGGCCTCATAGAGAATGGCCTGGACGATCTTGCGGGCCTTACCTTGCATGTTCAGCTCCCTGAATG‑AACGACCTGTAAAGCTACAAGATGCAGCCCGCAAGAAACAGCCCGAAATTTGGACAATCCCGCGTTCGGCTGCTTGTATCTATTCCGTACATGACAGTGACATCTCCTGCAC  >  NC_002947/3905169‑3905452

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.