| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3948573 | 69 (1.170) | 4 (0.070) | 4/242 | NT | 5.6% | coding (67/531 nt) | PP_3484 | two‑component system response regulator |
| ? | NC_002947 | = 3948596 | 69 (1.240) | coding (44/531 nt) | PP_3484 | two‑component system response regulator | |||||
CCTGTTCTTGCGTACAGCCTCCAGAACCTGAAAACCTTCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAGCAGGCTTCGTGCCAGG > NC_002947/3948427‑3948721 | ccTGTTCTTGCGTACAGCCTCCAGAACCTGAAAACCTTCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCt < 7:124872/149‑1 (MQ=255) tGTTCTTGCGTACAGCCTCCAGAACCTGAAAACCTTCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTg > 3:24853/1‑148 (MQ=255) ttCTTGCGTACAGCCTCCAGAACCTGAAAACCTTCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGc < 1:96224/147‑1 (MQ=255) gTACAGCCTCCAGAACCTGAAAACCTTCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCt < 7:11437/149‑1 (MQ=255) gTACAGCCTCCAGAACCTGAAAACCTTCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCt > 7:244257/1‑149 (MQ=255) tACAGCCTCCAGAACCTGAAAACCTTCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCtt > 8:108679/1‑149 (MQ=255) cAGCCTCCAGAACCTGAAAACCTTCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGc < 8:308112/149‑1 (MQ=255) aGCCTCCAGAACCTGAAAACCTTCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTg > 2:65836/1‑135 (MQ=255) aGCCTCCAGAACCTGAAAACCTTCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTg < 1:65836/135‑1 (MQ=255) cTCCAGAACCTGAAAACCTTCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGt < 1:185853/149‑1 (MQ=255) cAGAACCTGAAAACCTTCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGtttt < 7:180687/149‑1 (MQ=255) cAGAACCTGAAAACCTTCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGttt < 3:148045/148‑1 (MQ=255) aGAACCTGAAAACCTTCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGtttt > 8:180687/1‑148 (MQ=255) aGAACCTGAAAACCTTCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTg < 5:28122‑M2/149‑2 (MQ=255) gAACCTGAAAACCATCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTgc > 5:317592‑M2/1‑147 (MQ=255) aaCCTGAAAACCTTCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCaaaacctgcaagcgtatctgcaggcg > 1:77634‑M1/1‑123 (MQ=255) aaCCTGAAAACCTTCCATGTCGGGCAGCCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTgcg > 6:28122‑M2/1‑146 (MQ=255) cTGAAAACCTTCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTgcgcaa > 7:100599‑M2/1‑143 (MQ=255) aaCCTTCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCaaaacctgcaagcgtatctgcaggcgcaaggcct < 2:77634‑M1/149‑35 (MQ=255) aaCCTTCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTc < 4:24853/149‑1 (MQ=255) ccTTCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGTCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTg < 4:5519/149‑1 (MQ=255) ccATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCTGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCtt < 4:226308/123‑1 (MQ=255) ccATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCTGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCtt > 3:226308/1‑123 (MQ=255) ccATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTc < 5:226376/148‑1 (MQ=255) aTGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGt > 7:37819/1‑148 (MQ=255) ggCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGAc < 3:49685/149‑1 (MQ=255) cAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTa > 7:51683/1‑149 (MQ=255) aGGCGGTATTCCAGCACAACTCCTTGCGGGGCCAGGCGTTCAGCCTGTTCGTTACCACTGGCACCGTCGTGNGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTAc < 1:120175/149‑1 (MQ=255) ggCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTAcc < 8:51683/149‑1 (MQ=255) aaTCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCaaaacctgcaagcgtatctgcaggc < 5:300882‑M1/116‑26 (MQ=255) aaTCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCaaaacctgcaagcgtatctgcaggc > 6:300882‑M1/1‑91 (MQ=255) cAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTc < 3:242528/126‑1 (MQ=255) cAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTc > 4:242528/1‑126 (MQ=255) aGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATAAGCTTGCACGTTTTGCCCAAGAGTCTGTTCGTCATCCACTACCAATACTCAGtt > 8:32389/1‑149 (MQ=255) aGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACAACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACAAATAcaagcaa > 2:90717/1‑143 (MQ=255) actactTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCAcc > 1:371057/1‑147 (MQ=255) gCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGa < 7:108679/148‑1 (MQ=255) gTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTg < 6:298568/106‑1 (MQ=255) gTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTg > 5:298568/1‑106 (MQ=255) cAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAAt > 5:91757/1‑121 (MQ=255) cAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAAt < 6:91757/121‑1 (MQ=255) aGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCaaa > 2:281627/1‑148 (MQ=255) aGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCaaa > 8:105635/1‑148 (MQ=255) aGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCaaa > 2:235511/1‑148 (MQ=255) gCTTTCAGCCTGTTCGATACCACTGGCACCCTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGCCTCCCAAATa > 3:284085/1‑148 (MQ=255) tttCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTg > 5:355699/1‑149 (MQ=255) cAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGcc < 2:296816/148‑1 (MQ=255) ttCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTccc > 2:228568/1‑149 (MQ=255) ttCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTccc < 2:371057/149‑1 (MQ=255) ttCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTccc < 8:37819/149‑1 (MQ=255) gATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCg < 1:281627/148‑1 (MQ=255) ccACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCt < 8:244257/148‑1 (MQ=255) cACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTc < 2:327279/82‑1 (MQ=255) cACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGc > 5:219603/1‑149 (MQ=255) cACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGc > 5:333401/1‑149 (MQ=255) aCTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGc > 1:262253/1‑148 (MQ=255) ccGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACg > 4:76045/1‑149 (MQ=255) gtGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCtt < 1:228568/149‑1 (MQ=255) tGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACAAAGGTCGACTCCCAAATACTGCCCGGTACCCAGGTCTGCGATGTACGCACTTg > 3:293761/1‑149 (MQ=255) gggCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAAAACTGCCCGGTTCCCCGGTCTTCTAAGTACGCACTTg > 8:342917/1‑148 (MQ=255) ggCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTg > 6:350924/1‑147 (MQ=255) ggCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTT‑CCCGGTCTGCGAAGTACGCCCTTGTa < 7:105635/148‑1 (MQ=255) cATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTccc < 2:114163/120‑1 (MQ=255) cATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTccc > 1:114163/1‑120 (MQ=255) tGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACtt > 3:150414/1‑149 (MQ=255) gAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTcc > 1:239409/1‑98 (MQ=255) gAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTcc < 2:239409/98‑1 (MQ=255) gAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACtt > 5:343253/1‑148 (MQ=255) aaCTTCCAGGCCTTGCGCCTGCAGATACTCTTGCAGGTTTTGCGCAAGAGTCTTTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAAAACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTg < 7:342917/148‑1 (MQ=255) aCTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAg < 3:302775/149‑1 (MQ=255) ttCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGa > 8:87632/1‑90 (MQ=255) ttCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGa < 7:87632/90‑1 (MQ=255) ttCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAg > 3:164516/1‑147 (MQ=255) tCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAGCAg > 4:326621/1‑149 (MQ=255) ccAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAGCAg < 4:150414/148‑1 (MQ=255) cAGGCCTTGCGCCTGCATATACGCTTGCAGGTTTTGCGCAAGAGTATGTTCGTCATCGACTACCAATCCTCTGTTCACCAAGGTCTACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAGCAgg < 7:32389/148‑1 (MQ=255) cAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAGCAgg < 6:355699/148‑1 (MQ=255) aGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTgcgcaaggcctggaagttcatgttgcccacgacggtgccagtggtatcgaacaggctgaaagcctggcaccgcaagtagttgtgctggattaccgcctgcccgacatggaaggtt < 2:77634‑M2/149‑116 (MQ=255) aGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTAc > 3:68177/1‑124 (MQ=255) aGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTAc < 4:68177/124‑1 (MQ=255) aGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAGCAGGCt > 4:312105/1‑149 (MQ=255) ggCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAGCAGGCtt > 3:143173/1‑149 (MQ=255) cTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAGCAGGCTTCGt > 6:384943/1‑149 (MQ=255) ttGCGCaaaacctgcaagcgtatctgcaggcgcaaggcctggaagttcatgttgcccacgacggtgccagtggtatcgaacaggctgaaagcctggcaccgcaagtagttgtgctggattaccgcctgcccgacatggaaggttttcag > 7:100599‑M1/1‑6 (MQ=255) tGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGAc > 4:37328/1‑132 (MQ=255) tGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGAc < 3:37328/132‑1 (MQ=255) cgcaaaacctgcaagcgtatctgcaggcgcaaggcctggaagttcatgttgcccacgacggtgccagtggtatcgaacaggctgaaagcctggcaccgcaagtagttgtgctggattaccggctgcccgacatggaaggttttcaggtt > 6:28122‑M1/1‑3 (MQ=255) cgcCTGCAGATACGCTTGCAGGTTTTgcgcaaggcctggaagttcatgttgcccacgacggtgccagtggtatcgaacaggctgaaagcctggcaccgcaagtagttgtgctggattaccgcctgcccgacatggaaggttttcaggtt > 1:77634‑M2/1‑26 (MQ=255) cgcCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAGCAGGCTTCGTGCCa < 1:235511/149‑1 (MQ=255) gcaaaacctgcaagcgtatctgcaggcgcaaggcctggaagttcatgttgcccacgacggtgccagtggtatcgaacaggctgaaagcctggcaccgcaagtagttgtgctggattaccgcctgcccgacatggatggttttcaggttc > 5:317592‑M1/1‑2 (MQ=255) gcCTGCAGATACGCTTGCAGGTTTTgcgcaaggcctggaagttcatgttgcccacgacggtgccagtggtatcgaacaggctgaaagcctggcaccgcaagtagttgtgctggatt < 5:300882‑M2/116‑92 (MQ=255) gcCTGCAGATACGCTTGCAGGTTTTgcgcaaggcctggaagttcatgttgcccacgacggtgccagtggtatcgaacaggctgaaagcctggcaccgcaagtagttgtgctggatt > 6:300882‑M2/1‑25 (MQ=255) caaaacctgcaagcgtatctgcaggcgcaaggcctggaagttcatgttgcccacgacggtgccagtggtatcgaacaggctgaaagcctggcaccgcaagtagttgtgctggattaccgcctgcccgacatggaaggttttcaggttct < 5:28122‑M1/149‑149 (MQ=255) | CCTGTTCTTGCGTACAGCCTCCAGAACCTGAAAACCTTCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAGCAGGCTTCGTGCCAGG > NC_002947/3948427‑3948721 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |