New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3948573	69 (1.170)	4 (0.070)	4/242	NT	5.6%	coding (67/531 nt)	PP_3484	two‑component system response regulator
	?	NC_002947	= 3948596	69 (1.240)					coding (44/531 nt)	PP_3484	two‑component system response regulator

CAGAACCTGAAAACCTTCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAGCAGGCTTCGTGCCAGGCGTGAATAGTCATGTT  >  NC_002947/3948448‑3948737                                                                                                                                                     |                                                                                                                                              cAGAACCTGAAAACCTTCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGtttt                                                                                                                                               <  7:180687/149‑1 (MQ=255)  aGAACCTGAAAACCTTCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGtttt                                                                                                                                               >  8:180687/1‑148 (MQ=255)  aGAACCTGAAAACCTTCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTg                                                                                                                                              <  5:28122‑M2/149‑2 (MQ=255)   gAACCTGAAAACCATCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTgc                                                                                                                                             >  5:317592‑M2/1‑147 (MQ=255)    aaCCTGAAAACCTTCCATGTCGGGCAGCCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTgcg                                                                                                                                            >  6:28122‑M2/1‑146 (MQ=255)       cTGAAAACCTTCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTgcgcaa                                                                                                                                         >  7:100599‑M2/1‑143 (MQ=255)            aaCCTTCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTc                                                                                                                                    <  4:24853/149‑1 (MQ=255)              ccTTCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGTCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTg                                                                                                                                  <  4:5519/149‑1 (MQ=255)                  ccATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTc                                                                                                                               <  5:226376/148‑1 (MQ=255)                    aTGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGt                                                                                                                             >  7:37819/1‑148 (MQ=255)                          ggCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGAc                                                                                                                      <  3:49685/149‑1 (MQ=255)                            cAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTa                                                                                                                    >  7:51683/1‑149 (MQ=255)                             aGGCGGTATTCCAGCACAACTCCTTGCGGGGCCAGGCGTTCAGCCTGTTCGTTACCACTGGCACCGTCGTGNGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTAc                                                                                                                   <  1:120175/149‑1 (MQ=255)                              ggCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTAcc                                                                                                                  <  8:51683/149‑1 (MQ=255)                                        cAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTc                                                                                                                               <  3:242528/126‑1 (MQ=255)                                        cAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTc                                                                                                                               >  4:242528/1‑126 (MQ=255)                                         aGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATAAGCTTGCACGTTTTGCCCAAGAGTCTGTTCGTCATCCACTACCAATACTCAGtt                                                                                                       >  8:32389/1‑149 (MQ=255)                                         aGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACAACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACAAATAcaagcaa                                                                                                       >  2:90717/1‑143 (MQ=255)                                               actactTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCAcc                                                                                                   >  1:371057/1‑147 (MQ=255)                                                      gCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGa                                                                                           <  7:108679/148‑1 (MQ=255)                                                         gTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTg                                                                                                                                  >  5:298568/1‑106 (MQ=255)                                                         gTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTg                                                                                                                                  <  6:298568/106‑1 (MQ=255)                                                             cAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAAt                                                                                                               >  5:91757/1‑121 (MQ=255)                                                             cAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAAt                                                                                                               <  6:91757/121‑1 (MQ=255)                                                              aGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCaaa                                                                                   >  2:281627/1‑148 (MQ=255)                                                              aGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCaaa                                                                                   >  2:235511/1‑148 (MQ=255)                                                              aGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCaaa                                                                                   >  8:105635/1‑148 (MQ=255)                                                                gCTTTCAGCCTGTTCGATACCACTGGCACCCTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGCCTCCCAAATa                                                                                 >  3:284085/1‑148 (MQ=255)                                                                  tttCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTg                                                                              >  5:355699/1‑149 (MQ=255)                                                                     cAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGcc                                                                            <  2:296816/148‑1 (MQ=255)                                                                            ttCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTccc                                                                    <  8:37819/149‑1 (MQ=255)                                                                            ttCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTccc                                                                    <  2:371057/149‑1 (MQ=255)                                                                            ttCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTccc                                                                    >  2:228568/1‑149 (MQ=255)                                                                               gATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCg                                                                  <  1:281627/148‑1 (MQ=255)                                                                                   ccACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCt                                                              <  8:244257/148‑1 (MQ=255)                                                                                    cACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTc                                                                                                                               <  2:327279/82‑1 (MQ=255)                                                                                    cACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGc                                                            >  5:333401/1‑149 (MQ=255)                                                                                    cACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGc                                                            >  5:219603/1‑149 (MQ=255)                                                                                     aCTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGc                                                            >  1:262253/1‑148 (MQ=255)                                                                                            ccGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACg                                                    >  4:76045/1‑149 (MQ=255)                                                                                                 gtGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCtt                                               <  1:228568/149‑1 (MQ=255)                                                                                                  tGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACAAAGGTCGACTCCCAAATACTGCCCGGTACCCAGGTCTGCGATGTACGCACTTg                                              >  3:293761/1‑149 (MQ=255)                                                                                                   gggCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAAAACTGCCCGGTTCCCCGGTCTTCTAAGTACGCACTTg                                              >  8:342917/1‑148 (MQ=255)                                                                                                    ggCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTg                                              >  6:350924/1‑147 (MQ=255)                                                                                                    ggCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTT‑CCCGGTCTGCGAAGTACGCCCTTGTa                                            <  7:105635/148‑1 (MQ=255)                                                                                                         cATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTccc                                                                    >  1:114163/1‑120 (MQ=255)                                                                                                         cATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTccc                                                                    <  2:114163/120‑1 (MQ=255)                                                                                                           tGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACtt                                     >  3:150414/1‑149 (MQ=255)                                                                                                            gAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTcc                                                                                       >  1:239409/1‑98 (MQ=255)                                                                                                            gAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTcc                                                                                       <  2:239409/98‑1 (MQ=255)                                                                                                            gAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACtt                                     >  5:343253/1‑148 (MQ=255)                                                                                                             aaCTTCCAGGCCTTGCGCCTGCAGATACTCTTGCAGGTTTTGCGCAAGAGTCTTTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAAAACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTg                                    <  7:342917/148‑1 (MQ=255)                                                                                                              aCTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAg                                  <  3:302775/149‑1 (MQ=255)                                                                                                                ttCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGa                                                                                           <  7:87632/90‑1 (MQ=255)                                                                                                                ttCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGa                                                                                           >  8:87632/1‑90 (MQ=255)                                                                                                                ttCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAg                                  >  3:164516/1‑147 (MQ=255)                                                                                                                 tCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAGCAg                               >  4:326621/1‑149 (MQ=255)                                                                                                                  ccAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAGCAg                               <  4:150414/148‑1 (MQ=255)                                                                                                                   cAGGCCTTGCGCCTGCATATACGCTTGCAGGTTTTGCGCAAGAGTATGTTCGTCATCGACTACCAATCCTCTGTTCACCAAGGTCTACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAGCAgg                              <  7:32389/148‑1 (MQ=255)                                                                                                                   cAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAGCAgg                              <  6:355699/148‑1 (MQ=255)                                                                                                                    aGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTgcgcaaggcctggaagttcatgttgcccacgacggtgccagtggtatcgaacaggctgaaagcctggcaccgcaagtagttgtgctggattaccgcctgcccgacatggaaggtt                            <  2:77634‑M2/149‑116 (MQ=255)                                                                                                                    aGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTAc                                                     <  4:68177/124‑1 (MQ=255)                                                                                                                    aGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTAc                                                     >  3:68177/1‑124 (MQ=255)                                                                                                                    aGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAGCAGGCt                            >  4:312105/1‑149 (MQ=255)                                                                                                                     ggCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAGCAGGCtt                           >  3:143173/1‑149 (MQ=255)                                                                                                                        cTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAGCAGGCTTCGt                        >  6:384943/1‑149 (MQ=255)                                                                                                                          tGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGAc                                       <  3:37328/132‑1 (MQ=255)                                                                                                                          tGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGAc                                       >  4:37328/1‑132 (MQ=255)                                                                                                                            cgcCTGCAGATACGCTTGCAGGTTTTgcgcaaggcctggaagttcatgttgcccacgacggtgccagtggtatcgaacaggctgaaagcctggcaccgcaagtagttgtgctggattaccgcctgcccgacatggaaggttttcaggtt                    >  1:77634‑M2/1‑26 (MQ=255)                                                                                                                            cgcCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAGCAGGCTTCGTGCCa                    <  1:235511/149‑1 (MQ=255)                                                                                                                             gcCTGCAGATACGCTTGCAGGTTTTgcgcaaggcctggaagttcatgttgcccacgacggtgccagtggtatcgaacaggctgaaagcctggcaccgcaagtagttgtgctggatt                                                    >  6:300882‑M2/1‑25 (MQ=255)                                                                                                                             gcCTGCAGATACGCTTGCAGGTTTTgcgcaaggcctggaagttcatgttgcccacgacggtgccagtggtatcgaacaggctgaaagcctggcaccgcaagtagttgtgctggatt                                                    <  5:300882‑M2/116‑92 (MQ=255)                                                                                                                               cTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAGCAGGCTTCGTGCCAGGc                 <  3:76045/149‑1 (MQ=255)                                                                                                                                 gCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCGCAAATAATGCCCGGGTCGCCGGTCTGCGAAGTACGCCCTTGTAGCGACTTGAGCAGGCTTCGTGCCAGGCGt               >  8:2007/1‑149 (MQ=255)                                                                                                                                 gCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAGCAGGCTTCGTTCCAGGCGt               >  5:49841/1‑149 (MQ=255)                                                                                                                                  cAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAGCAGGCTTCGTGCCAGGCGt               >  4:366752/1‑148 (MQ=255)                                                                                                                                     aTACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAGCAGGCTTCGTGCCAGGCGTGaa            >  5:224420/1‑148 (MQ=255)                                                                                                                                         gCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAGCAGGCTTCGTGCCAGGCGTGAATAGTc       <  6:219603/149‑1 (MQ=255)                                                                                                                                             gCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAGCAGGCTTCGTGCCAGGCGTGAATAGTCATg    <  5:350924/148‑1 (MQ=255)                                                                                                                                              cAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAGCAGGCTTCGTGCCAGGCGTGAATAGTCATGtt  >  6:339242/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                              CAGAACCTGAAAACCTTCCATGTCGGGCAGGCGGTAATCCAGCACAACTACTTGCGGTGCCAGGCTTTCAGCCTGTTCGATACCACTGGCACCGTCGTGGGCAACATGAACTTCCAGGCCTTGCGCCTGCAGATACGCTTGCAGGTTTTGCGCAAGAGTCTGTTCGTCATCGACTACCAATACTCTGTTCACCAAGGTCGACTCCCAAATACTGCCCGGTTCCCCGGTCTGCGAAGTACGCCCTTGTAGAGACTTGAGCAGGCTTCGTGCCAGGCGTGAATAGTCATGTT  >  NC_002947/3948448‑3948737

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.