New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4139858 =65 (1.100)3 (0.050) 3/248 NT 5.2% coding (791/1041 nt) PP_3644 monooxygenase subunit
?NC_002947 4139899 = 47 (0.820)coding (832/1041 nt) PP_3644 monooxygenase subunit

GACAACAACCCGGACGTGCCGCGCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATCGCGCGCATCAAGTACTACCAGGAACTGG  >  NC_002947/4139710‑4140004
                                                                                                                                                    |                                                                                                                                                   
gACAACAACCCGGACGTGCCGCGCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAgac                                                                                                                                                     <  5:71531/149‑1 (MQ=255)
 gggcaagctgttgtcgcaccagaagctgaactcgtcgacgcccagttcctggtagtacttgatgcgcgcgatgatttcttccggggtgccgatcatggtgttcttgcggatgttctccagctggaacgccggcacttcggcgaacttCg                                                                                                                                                    >  4:160859‑M1/148‑149 (MQ=255)
   gcaagctgttgtcgcaccagaagctgaactcgtcgacgcccagttcctggtagtacttgatgcgcgcgatgatttcttccggggtgccgatcatggtgttcttgcggatgttctccagctggaacgccggcacttcggcgaacttCGAc                                                                                                                                                  <  8:222856‑M1/4‑1 (MQ=255)
     caacCCGGACGTGCCGCGCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGAccc                                                                                                                                                <  8:10858/149‑1 (MQ=255)
      aacCCGGACGTGCCGCGCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGAcccg                                                                                                                                               >  5:252642/1‑148 (MQ=255)
      aacCCGGACGTGCCGCGCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGAcccc                                                                                                                                               >  6:112215/1‑149 (MQ=255)
      aacCCGGACGTGCCGCGCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGAcccc                                                                                                                                               >  2:87867/1‑149 (MQ=255)
      aacCCGGACGTGCCGCGCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGAcccc                                                                                                                                               >  2:82572/1‑149 (MQ=255)
        cccGGACGTGCCGCGCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCgg                                                                                                                                             <  3:101357/149‑1 (MQ=255)
        cccGGACGTGCCGCGCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCgg                                                                                                                                             >  7:14853/1‑149 (MQ=255)
             aCGTGCCGCGCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAAt                                                                                                                                        <  4:249661/149‑1 (MQ=255)
             aCGTGCCGCGCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAAt                                                                                                                                        <  6:114860/149‑1 (MQ=255)
             aCGTGCCGCGCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAAt                                                                                                                                        >  3:116052/1‑149 (MQ=255)
             aCGTGCCGCGCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAAt                                                                                                                                        <  8:14853/149‑1 (MQ=255)
               gTGCCGCGCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATgg                                                                                                                                      <  7:50947/149‑1 (MQ=255)
                   cgcgCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTc                                                                                                                                  <  5:112215/149‑1 (MQ=255)
                      gcCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTg                                                                                                                               <  6:240579/149‑1 (MQ=255)
                               tGATGGTGCTGCGCCACACCCACGTGCACAGCCCGTCCGACCTGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGgagccgagc                                                                                                                     >  2:172759/1‑149 (MQ=255)
                                      gctgcGCCACACCCACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACTAGACGACCCCGGTGAATGGCTTCCTGgag                                                                                                                           <  1:221231/136‑1 (MQ=255)
                                      gctgcGCCACACCCACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGgag                                                                                                                           >  2:221231/1‑136 (MQ=255)
                                        tgcGCCACACCCACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGCCGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTc                                                                                                             >  8:330662/1‑148 (MQ=255)
                                          cgcCACCCCCCCGTGCCCAGCCCGTCCCCCCCGGAAGGCTGGAAGGTCGGGGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCGGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGaa                                                                                                          <  4:39222/149‑1 (MQ=255)
                                          cgcCACACCCACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGaa                                                                                                          <  7:114862/149‑1 (MQ=255)
                                          cgcCACACCCACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGaa                                                                                                          <  8:206778/149‑1 (MQ=255)
                                          cgcCACACCCACCTGCCCAGCCCGTCCGACCCGGACGGCTGGAAGGGCGGTGCCCAGGCGATCTCGCGCTCCTACCGCCCCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGGCGaa                                                                                                          <  4:44098/149‑1 (MQ=255)
                                           gcCACACCCACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAg                                                                                                         <  4:116052/149‑1 (MQ=255)
                                                 ctggtagtacttgatgcgcgcgatgatttcttccggggtgccgatcatggtgttcttgcggatgttctccagctggaacgccggcacttcggcgaacttCGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGc                                                                                                    >  3:73451‑M1/100‑148 (MQ=255)
                                                  ccACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGAGAGCCGAGCCCGGAGTCGAAGTTCGcc                                                                                                   <  1:210225/149‑1 (MQ=255)
                                                  ccACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGcc                                                                                                   >  8:263379/1‑148 (MQ=255)
                                                  ccACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGcc                                                                                                   >  3:38896/1‑148 (MQ=255)
                                                  ccACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCg                                                                                                  >  2:18873/1‑149 (MQ=255)
                                                      gTGCTCAGCCCGTCCGACCCGGAAGGCTGGAAGGTGGGTGCCCAGGCGATCTCGCGCTTGTCCCGCACCTTGGATGCGTGGTTGGGCTACAAGACGTCGCGGTTTTATGGCTTCCTGGAGCCGAGCCCGGAGTct                                                                                                            <  7:307790/135‑2 (MQ=255)
                                                      gTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGATCGCCAACAAGACGACCACGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCg                                                                                                            >  8:307790/1‑135 (MQ=255)
                                                          acaGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCg                                                                                          <  1:82572/149‑1 (MQ=255)
                                                          acaGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCg                                                                                          <  1:87867/149‑1 (MQ=255)
                                                             gCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGgagccgagcc                                                                                                                    >  6:379028/1‑120 (MQ=255)
                                                             gCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGgagccgagcc                                                                                                                    <  5:379028/120‑1 (MQ=255)
                                                                    cGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGc                                                                                >  3:40795/1‑149 (MQ=255)
                                                                           tttcttccggggtgccgatcattgtgttcttgcggatgttctccagctggaacgccggcacttcggcgaacttCGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAg                                                                                                         >  4:113806‑M1/74‑117 (MQ=255)
                                                                           tttcttccggggtgccgatcattgtgttcttgaggatgttctccagctggaacgccggcacttcggcgaacttCGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAg                                                                                                         <  3:113806‑M1/44‑1 (MQ=255)
                                                                           gAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGaa                                                                         <  1:246034/149‑1 (MQ=255)
                                                                            aaGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAAc                                                                        <  1:172759/149‑1 (MQ=255)
                                                                              ggCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACAt                                                                      <  4:38896/149‑1 (MQ=255)
                                                                                 tGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCg                                                                   >  4:359315/1‑149 (MQ=255)
                                                                                                 aGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGga                                                                            >  4:325118/1‑124 (MQ=255)
                                                                                                 aGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGga                                                                            <  3:325118/124‑1 (MQ=255)
                                                                                                 aGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACAcc                                                         <  1:100351/143‑1 (MQ=255)
                                                                                                 aGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACAcc                                                         >  2:100351/1‑143 (MQ=255)
                                                                                                       tctcGCGCTTCTGCCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCAAGCTGGAGAACATCCGCAAGAACACCATGATCGGCAcc                                             >  2:293904/1‑149 (MQ=255)
                                                                                                           gcgcTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCg                                          <  3:359315/148‑1 (MQ=255)
                                                                                                             gcTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCgg                                         >  2:379756/1‑147 (MQ=255)
                                                                                                             gcTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGgaa                                       <  6:116631/149‑1 (MQ=255)
                                                                                                               ttCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGCACACCATTATCGGAACCCCGgaag                                      >  7:173329/1‑148 (MQ=255)
                                                                                                                 cTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGgaagaa                                    <  4:40795/148‑1 (MQ=255)
                                                                                                                  tACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAat                                  >  1:36510/1‑149 (MQ=255)
                                                                                                                      gCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAatcatc                              >  5:87818/1‑149 (MQ=255)
                                                                                                                           ttCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATcgcgcg                         >  7:222856/1‑149 (MQ=255)
                                                                                                                            tCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATcgcgcg                         >  6:338788/1‑148 (MQ=255)
                                                                                                                                      gTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATCGCGCGCATCAAGtact              <  5:338788/149‑1 (MQ=255)
                                                                                                                                      gTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATCGCGCGCATCAAGta                <  2:36510/147‑1 (MQ=255)
                                                                                                                                          ggCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGc                                                                                        <  2:322278/71‑1 (MQ=255)
                                                                                                                                          ggCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGc                                                                                        >  1:318105/1‑71 (MQ=255)
                                                                                                                                          ggCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGc                                                                                        <  2:318105/71‑1 (MQ=255)
                                                                                                                                          ggCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGc                                                                                        >  1:322278/1‑71 (MQ=255)
                                                                                                                                          ggCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATCGCGCGCATCAAGTACTACCa          <  7:263379/149‑1 (MQ=255)
                                                                                                                                           gCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCg                                                                                          <  7:161929/68‑1 (MQ=255)
                                                                                                                                           gCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCg                                                                                          >  8:161929/1‑68 (MQ=255)
                                                                                                                                             aacaaGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATc                                                   <  2:283966/105‑1 (MQ=255)
                                                                                                                                             aacaaGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATCGCGCGCATCAAg                  <  5:230042/138‑1 (MQ=255)
                                                                                                                                             aacaaGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATCGCGCGCATCAAg                  >  6:230042/1‑138 (MQ=255)
                                                                                                                                             aacaaGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAATTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATc                                                   >  1:283966/1‑105 (MQ=255)
                                                                                                                                                  gacgacCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATCGCGCGCATCAAGTACTACCAGGAACTgg  <  6:87818/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
GACAACAACCCGGACGTGCCGCGCCCGCAACTGATGGTGCTGCGCCACACCCACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGGAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATCGCGCGCATCAAGTACTACCAGGAACTGG  >  NC_002947/4139710‑4140004

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.