| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4139858 = | 65 (1.100) | 3 (0.050) | 3/248 | NT | 5.2% | coding (791/1041 nt) | PP_3644 | monooxygenase subunit |
| ? | NC_002947 | 4139899 = | 47 (0.820) | coding (832/1041 nt) | PP_3644 | monooxygenase subunit | |||||
CGCCACACCCACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATCGCGCGCATCAAGTACTACCAGGAACTGGGCGTCGACGAGTTCAGCTTCTGGTGCGACAACAGCTTGCCC > NC_002947/4139752‑4140045 | cgcCACCCCCCCGTGCCCAGCCCGTCCCCCCCGGAAGGCTGGAAGGTCGGGGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCGGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGaa < 4:39222/149‑1 (MQ=255)cgcCACACCCACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGaa < 8:206778/149‑1 (MQ=255)cgcCACACCCACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGaa < 7:114862/149‑1 (MQ=255)cgcCACACCCACCTGCCCAGCCCGTCCGACCCGGACGGCTGGAAGGGCGGTGCCCAGGCGATCTCGCGCTCCTACCGCCCCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGGCGaa < 4:44098/149‑1 (MQ=255) gcCACACCCACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAg < 4:116052/149‑1 (MQ=255) ctggtagtacttgatgcgcgcgatgatttcttccggggtgccgatcatggtgttcttgcggatgttctccagctggaacgccggcacttcggcgaacttCGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGc > 3:73451‑M1/100‑148 (MQ=255) ccACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTGAGAGCCGAGCCCGGAGTCGAAGTTCGcc < 1:210225/149‑1 (MQ=255) ccACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGcc > 8:263379/1‑148 (MQ=255) ccACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGcc > 3:38896/1‑148 (MQ=255) ccACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCg > 2:18873/1‑149 (MQ=255) acaGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCg < 1:82572/149‑1 (MQ=255) acaGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCg < 1:87867/149‑1 (MQ=255) cGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGc > 3:40795/1‑149 (MQ=255) tttcttccggggtgccgatcattgtgttcttgcggatgttctccagctggaacgccggcacttcggcgaacttCGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAg > 4:113806‑M1/74‑117 (MQ=255) tttcttccggggtgccgatcattgtgttcttgaggatgttctccagctggaacgccggcacttcggcgaacttCGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAg < 3:113806‑M1/44‑1 (MQ=255) gAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGaa < 1:246034/149‑1 (MQ=255) aaGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAAc < 1:172759/149‑1 (MQ=255) ggCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACAt < 4:38896/149‑1 (MQ=255) tGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCg > 4:359315/1‑149 (MQ=255) aGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGga < 3:325118/124‑1 (MQ=255) aGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGga > 4:325118/1‑124 (MQ=255) aGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACAcc < 1:100351/143‑1 (MQ=255) aGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACAcc > 2:100351/1‑143 (MQ=255) tctcGCGCTTCTGCCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCAAGCTGGAGAACATCCGCAAGAACACCATGATCGGCAcc > 2:293904/1‑149 (MQ=255) gcgcTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCg < 3:359315/148‑1 (MQ=255) gcTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCgg > 2:379756/1‑147 (MQ=255) gcTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGgaa < 6:116631/149‑1 (MQ=255) ttCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGCACACCATTATCGGAACCCCGgaag > 7:173329/1‑148 (MQ=255) cTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGgaagaa < 4:40795/148‑1 (MQ=255) tACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAat > 1:36510/1‑149 (MQ=255) gCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAatcatc > 5:87818/1‑149 (MQ=255) ttCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATcgcgcg > 7:222856/1‑149 (MQ=255) tCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATcgcgcg > 6:338788/1‑148 (MQ=255) gTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATCGCGCGCATCAAGtact < 5:338788/149‑1 (MQ=255) gTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATCGCGCGCATCAAGta < 2:36510/147‑1 (MQ=255) ggCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGc > 1:322278/1‑71 (MQ=255) ggCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGc < 2:322278/71‑1 (MQ=255) ggCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGc < 2:318105/71‑1 (MQ=255) ggCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGc > 1:318105/1‑71 (MQ=255) ggCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATCGCGCGCATCAAGTACTACCa < 7:263379/149‑1 (MQ=255) gCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCg > 8:161929/1‑68 (MQ=255) gCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCg < 7:161929/68‑1 (MQ=255) gcgaacttcgactccgggctcggctccaggaagccattcaccggggtcgAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATCGCGCGCATCAAGTACTACCAg > 3:73451‑M2/50‑148 (MQ=255) aacaaGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATc < 2:283966/105‑1 (MQ=255) aacaaGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATCGCGCGCATCAAg < 5:230042/138‑1 (MQ=255) aacaaGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATCGCGCGCATCAAg > 6:230042/1‑138 (MQ=255) aacaaGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAATTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATc > 1:283966/1‑105 (MQ=255) gacgacCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATCGCGCGCATCAAGTACTACCAGGAACTgg < 6:87818/149‑1 (MQ=255) cttcgactccgggctcggctccaggaagccattcaccggggtcgAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCTCAAGAACACAATGATCGGCACCCCGGAAGaaa < 3:113806‑M2/73‑1 (MQ=255) cttcgactccgggctcggctccaggaagccattcaccggggtcgAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACAATGATCGGCACCCCGGAAGaaa > 4:113806‑M2/45‑117 (MQ=255) gTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATCGCGCGCATCAAGtactac > 5:218117/1‑129 (MQ=255) gTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATCGCGCGCATCAAGtactac < 6:218117/129‑1 (MQ=255) gTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTGCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATCGCGCGCATCAAGTACTACCAGGAACTGGGCGTcgacga < 6:252642/149‑1 (MQ=255) aaTGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATCGCGCGCATCAAGTACTACCAGGAACTGGGCGTCGACGAGt < 7:330662/148‑1 (MQ=255) ttCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCAc > 6:38380/1‑86 (MQ=255) ttCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCAc < 5:38380/86‑1 (MQ=255) ttCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATCGCGCGCATCAAGTACTACCAGGAACTGGGCGTCGACGAGTTCAGCtt > 8:219018/1‑149 (MQ=255) cTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATCGCGCGCATCAAGTACTACCAGGAACTGGGCGTCGACGAGTTCAGCTTCt < 7:219018/148‑1 (MQ=255) ccGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATCGCGCGCATCAAGTACTACCAGGAACTGGGCGTCGACGAGTTCa > 6:371005/1‑130 (MQ=255) ccGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATCGCGCGCATCAAGTACTACCAGGAACTGGGCGTCGACGAGTTCa < 5:371005/130‑1 (MQ=255) gtcgAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATCGCGCGCATCAAGTACTACCAGGAACTGGGCGTCGACGAGTTCAGCTTCTGGTGCGACAACAGCTTGc < 8:222856‑M2/145‑1 (MQ=255) cgAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATCGCGCGCATCAAGTACTACCAGGAACTGGGCGTCGACGAGTTCAGCTTCTGGTGCGACAACAGCTTGccc > 4:160859‑M2/3‑149 (MQ=255) | CGCCACACCCACGTGCACAGCCCGTCCGACCCGGAAGGCTGGAAGGTCGGTGCCCAGGCGATCTCGCGCTTCTACCGCACCTTCGATGCCTGGTTCGGCAACAAGACGACCCCGGTGAATGGCTTCCTG‑GAGCCGAGCCCGGAGTCGAAGTTCGCCGAAGTGCCGGCGTTCCAGCTGGAGAACATCCGCAAGAACACCATGATCGGCACCCCGGAAGAAATCATCGCGCGCATCAAGTACTACCAGGAACTGGGCGTCGACGAGTTCAGCTTCTGGTGCGACAACAGCTTGCCC > NC_002947/4139752‑4140045 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |