New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5177969 =	59 (1.000)	3 (0.050)	3/246	NT	5.1%	coding (16/1221 nt)	PP_4553	ECF family RNA polymerase sigma‑70 factor
	?	NC_002947	5178009 =	54 (0.950)					coding (479/486 nt)	PP_4554	hypothetical protein

CGCGGGTTGGCGGGGATACCGTCGCGTTGCCAGCGTTCGACGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCTGGTGGAAGCCCATTTCTTCATGGGCCCGGCAGTCGGTGGCATTCCAGTGCCA  >  NC_002947/5177821‑5178115                                                                                                                                                     |                                                                                                                                                   ttgacgaggaacagggcaaaacccgctacaccgcccgtgcctggcactggaatgccaccgactgccgggcccatgaagaaatgggcttccaccagggctggggagaaagcctggaccgcctggtggaggtggtgacccagcggatgccc                                                                                                                                                    <  5:335256‑M1/1‑1 (MQ=255)  gcgGGTTGGCGGGGATACCGTCGCGTTGCCAGCGTTCGTCGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCGAGTATGGGGGGCGACTCCTGCCGGTACACAGCCTc                                                                                                                                                    <  5:148305/148‑1 (MQ=255)   gacgaggaacagggcaaaacccgctacaccgcccgtgcctggcactggaatgccaccgactgccgggcccatgaagaaatgggcttccaccagggctggggagaaagcctggaccgcctggtggaggtggtgacccagcggatgccCGa                                                                                                                                                  <  2:85328‑M1/3‑1 (MQ=255)    acgaggaacagggcaaaacccgctacaccgcccgtgcctggcactggaatgccaccgactgccgggcccatgaagaaatgggcttccaccagggctggggagaaagcctggaccgcctggtggaggtggtgacccagcggatgccCGAc                                                                                                                                                 <  3:92699‑M1/4‑1 (MQ=255)      gaggaacagggcaaaacccgctacaccgcccgtgcctggcactggaatgccaccgactgccgggcccatgaagaaatgggcttccaccagggctggggagaaagcctggaccgcctggtggaggtggtgacccagcggatgccCGACt                                                                                                                                                <  8:78824‑M1/5‑1 (MQ=255)      gTTGGCGGGGATACCGTCGCGTTGCCAGCGTTCGACGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACtt                                                                                                                                               <  1:89568/149‑1 (MQ=255)      gTTGGCGGGGATACCGTCGCGTTGCCAGCGTTCGACGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACtt                                                                                                                                               <  6:112297/149‑1 (MQ=255)          gCGGGGATACCGTCGCGTTGCCAGCGTTCGACGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGTGACTCCTGCCGGTACACAGCCTCGACTTCgg                                                                                                                                            <  6:267689/148‑1 (MQ=255)          gCGGGGATACCGTCGCGTTGCCAGCGTTCGACGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCgg                                                                                                                                            >  8:94357/1‑148 (MQ=255)          gCGGGGATACCGTCGCGTTGCCAGCGTTCGACGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGgc                                                                                                                                           <  3:289262/149‑1 (MQ=255)                aTACCGTCGCGTTGCCAGCGTTCGACGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGgcacgcac                                                                                                                                     >  8:192567/1‑149 (MQ=255)                    cGTCGCGTTGCCAGCGTTCGACGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTgg                                                                                                                                 >  1:68491/1‑149 (MQ=255)                    cGTCGCGTTGCCAGCGTTCGACGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTgg                                                                                                                                 >  1:195130/1‑149 (MQ=255)                              ccAGCGTTCGACGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCgg                                                                                                                       <  7:94357/149‑1 (MQ=255)                                aGCGTTCGACGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGcc                                                                                                                     <  7:240376/149‑1 (MQ=255)                                aGCGTTCGACGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGc                                                                                                                      >  3:36278/1‑148 (MQ=255)                                  cGTTCGACGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCAt                                                                                                                   <  1:116623/149‑1 (MQ=255)                                    ttCGACGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCa                                                                                                                 <  3:17839/149‑1 (MQ=255)                                    ttCGACGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCa                                                                                                                 <  7:192567/149‑1 (MQ=255)                                      cGACGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGt                                                                                                               >  3:186480/1‑149 (MQ=255)                                       gACGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTc                                                                                                              <  3:196550/149‑1 (MQ=255)                                         ctggcactggaatgccaccgactgccgggcccatgaagaaatgggcttccaccagggctggggagaaagccaggaccgcctggtggaggtggtgacccagcggatgccCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCgg                                                                                                            >  1:119388‑M1/109‑149 (MQ=255)                                         cGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGGACCTGGGCCAGTGCGGCCATCAGTCgg                                                                                                            <  4:248600/149‑1 (MQ=255)                                                 aagaagGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGc                                                                                                    >  6:15762/1‑149 (MQ=255)                                                         accgactgccgggcccatgaagaaatgggcttccaccagggctggggagaaagcctggaccgcctggtggaggtggtgacccagcggatgccCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGt                                                                                                               >  8:275892‑M1/93‑130 (MQ=255)                                                         accgactgccgggcccatgaagaaatgggcttccaccagggctggggagaaagcctggaccgcctggtggaggtggtgacccagcggatgccCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGt                                                                                                               <  7:275892‑M1/38‑1 (MQ=255)                                                          tcatGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTcacc                                                                                           <  5:15762/149‑1 (MQ=255)                                                                atgGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTcc                                                                                     <  2:238529/149‑1 (MQ=255)                                                                atgGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTc                                                                                      >  6:343343/1‑148 (MQ=255)                                                                atgGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTc                                                                                      >  5:251511/1‑148 (MQ=255)                                                                      tcctcGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTcaccac                                                                                         >  3:213981/1‑139 (MQ=255)                                                                      tcctcGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTcaccac                                                                                         <  4:213981/139‑1 (MQ=255)                                                                          cGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCgg                                                                                                            <  8:116090/116‑1 (MQ=255)                                                                          cGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCgg                                                                                                            >  7:116090/1‑116 (MQ=255)                                                                              cAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAg                                                                       >  7:76219/1‑149 (MQ=255)                                                                                ggTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGc                                                                     <  5:343343/149‑1 (MQ=255)                                                                                 gTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCt                                                                    >  8:152866/1‑149 (MQ=255)                                                                                  tCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCtt                                                                   >  8:75300/1‑149 (MQ=255)                                                                                     aaaTCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTtct                                                                <  1:229897/149‑1 (MQ=255)                                                                                        tCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTccc                                                             <  6:135542/149‑1 (MQ=255)                                                                                                 aaGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCtgg                                                    >  5:304167/1‑149 (MQ=255)                                                                                                 aaGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCtgg                                                    <  7:222807/149‑1 (MQ=255)                                                                                                   gCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCtggtg                                                  <  8:76219/149‑1 (MQ=255)                                                                                                    cGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCtggtgg                                                 <  7:75300/149‑1 (MQ=255)                                                                                                      gATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCTGGTGGaa                                               <  4:36278/149‑1 (MQ=255)                                                                                                           gtgtCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCAt                                                                                                        >  2:183288/1‑87 (MQ=255)                                                                                                           gtgtCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCAt                                                                                                        <  1:183288/87‑1 (MQ=255)                                                                                                           gtgtCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCTGGTGGAAGCCCa                                          >  5:8286/1‑149 (MQ=255)                                                                                                           gtgtCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAATGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCTGGTGGAAGCCCa                                          >  1:303806/1‑149 (MQ=255)                                                                                                             gtCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCTGGTGGAAGCCCAtt                                        >  4:92699/1‑149 (MQ=255)                                                                                                                gCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCTGGTGGAAGCCCATttct                                     <  1:145095/149‑1 (MQ=255)                                                                                                                      aTGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCTGGTGGAAGCCCATTTCTTCATgg                               >  6:335256/1‑149 (MQ=255)                                                                                                                          gccgcGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCTGGTGGAAGCCCATTTCTTCATGGGccc                           >  1:111079/1‑149 (MQ=255)                                                                                                                           ccgcGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGC‑TTCTCCCCAGCACTGGTGGAAGCCCATTTCTTCATGGGCCCgg                         >  3:81164/1‑149 (MQ=255)                                                                                                                                aCTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCTGGTGGAAGCCCATTTCTTCATGGGCCCGGCAGt                     <  7:152866/149‑1 (MQ=255)                                                                                                                                 cTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCtggtgg                                                 >  1:88549/1‑120 (MQ=255)                                                                                                                                 cTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCtggtgg                                                 <  2:88549/120‑1 (MQ=255)                                                                                                                                    cTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCTGGTGGAAGCCCATTTCTTCATGGGCCCGGCAGTCGGt                 >  4:8341/1‑149 (MQ=255)                                                                                                                                     tGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCCCCAGGCGGTCCAGGCTTTCTCCCCAGCCCTGGTGGAAGCCCATTTCTTCATGGGCCCGGCAGTCGGTg                >  3:90497/1‑149 (MQ=255)                                                                                                                                      gCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCTGGTGGAAGCCCATTTCTTCATGGGCCCGGCAGTc                    >  5:338165/1‑144 (MQ=255)                                                                                                                                      gCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCTGGTGGAAGCCCATTTCTTCATGGGCCCGGCAGTc                    <  6:338165/144‑1 (MQ=255)                                                                                                                                      gCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCTGGTGGAAGCCCATTTCTTCATGGGCCCGGCAGTCGGTgg               >  3:7975/1‑149 (MQ=255)                                                                                                                                         ggTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCTGGTGGAAGCCCATTTCTTCATGGGCCCGGCAGTCGGTGGCAt            <  2:111079/149‑1 (MQ=255)                                                                                                                                         ggTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCTGGTGGAAGCCCATTTCTTCATGGGCCCGGCAGTCGGTGGCAt            >  2:298335/1‑149 (MQ=255)                                                                                                                                         ggTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCTGGTGGAAGCCCATTTCTTCATGGGCCCGGCAGTCGGAGGCa             >  6:34324/1‑148 (MQ=255)                                                                                                                                            acacAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCTGGTGGAAGCCCATttctt                                    <  4:283074/122‑1 (MQ=255)                                                                                                                                            acacAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCTGGTGGAAGCCCATttctt                                    >  3:283074/1‑122 (MQ=255)                                                                                                                                                  ccTCGGCTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAg                                                                       >  5:225503/1‑81 (MQ=255)                                                                                                                                                  ccTCGGCTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAg                                                                       <  6:225503/81‑1 (MQ=255)                                                                                                                                                   cTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCTGGTGGAAGCCCATTTCTTCATGGGCCCGGCAGTCGGTGGCATTCCAGTGCCa  <  5:34324/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   CGCGGGTTGGCGGGGATACCGTCGCGTTGCCAGCGTTCGACGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGTATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCTGGTGGAAGCCCATTTCTTCATGGGCCCGGCAGTCGGTGGCATTCCAGTGCCA  >  NC_002947/5177821‑5178115

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.