New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	496732 =	57 (0.960)	4 (0.070)	4/242	NT	6.7%	coding (604/2388 nt)	PP_0409	two‑component system sensor histidine kinase
	?	NC_002947	496774 =	57 (1.020)					coding (646/2388 nt)	PP_0409	two‑component system sensor histidine kinase

GCGCGGCAACTACGGCAACCTCAACCTGCAGGGGGTGCCCGACGATCGTGAGGCCTTGCAACTGGTGGTAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACTTGAACGTGGCTTGCAGGCCGTGCCGGCCAAGGAGCTGGAGCAACTGCATCAGCGCTGGTTGCAGCC  >  NC_002947/496626‑496919                                                                                                                                                     |                                                                                                                                                   gcgcGGCAACTACGGCAACCTCAACCTGCAGGGGGTGCCCGACGATCGTGAGGCCTTGCAACTGGTGGTAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTgg                                                                                                                                                    >  3:74206/1‑149 (MQ=255) ccggcacggcctgcaagccacgttcaagtacatcggccagcatcggccagtcgcgccgcgaaccgatacgcaacagttgcggcaggccaatatcgccgaccaccgcCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTgg                                                                                                                                                    >  1:256516‑M1/107‑149 (MQ=255)  cggcacggcctgcaagccacgttcaagtacatcggccagcatcggccagtcgcgccgcgaacctatacgcaacagttgcggcaggccaatatcgccgaccaccgcCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGc                                                                                                                                                   >  6:183910‑M1/106‑149 (MQ=255)  cgcgGCAACTACGGCAACCTCAACCTGCAGGGGGTGCCCGACGATCGTGAGGCCTTGCAACTGGTGGTAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTgg                                                                                                                                                    <  4:74206/148‑1 (MQ=255)       cAACTACGGCAACCTCAACCTGCAGGGGGTGCCCGACGATCGTGAGGCCTTGCAACTGGTGGTAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCggtgg                                                                                                                                              >  3:112038/1‑149 (MQ=255)                    ctcaacctGCAGGGGGTGCCCGACGATCGTGAGGCCTTGCAACTGGTGGTAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTgg                                                                                                                                 >  4:173670/1‑149 (MQ=255)                     tcaacctGCAGGGGGTGCCCGACGATCGTGAGGCCTTGCAACTGGTGGTAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGc                                                                                                                                >  5:54775/1‑149 (MQ=255)                       aacctGCAGGGGGTGCCCGACGATCGTGAGGCCTTGCAACTGGTGGTAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTTGCGGTGGTCGGCGATATTGGCCt                                                                                                                              >  3:285311/1‑149 (MQ=255)                         cctGCAGGGGGTGCCCGACGATCGTGAGGCCTTGCAACTGGTGGTAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGc                                                                                                                            >  6:31229/1‑149 (MQ=255)                         cctGCAGGGGGTGCCCGACGATCGTGAGGCCTTGCAACTGGTGGTAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGc                                                                                                                            >  6:36763/1‑149 (MQ=255)                         cctGCAGGGGGTGCCCGACGATCGTGAGGCCTTGCAACTGGTGGTAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGc                                                                                                                            <  3:339166/149‑1 (MQ=255)                          ctGCAGGGGGTGCCCGACGATCGTGAGGCCTTGCAACTGGTGGTAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCAGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGcc                                                                                                                           >  5:103021/1‑149 (MQ=255)                              aGGGGGTGCCCGACGATCGTGAGGCCTTGCAACTGGTGGTAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCaa                                                                                                                       <  3:92080/149‑1 (MQ=255)                                    tGCCCGACGATCGTGAGGCCTTGCAACTGGTGGTAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGa                                                                                                                                       <  2:311417/127‑1 (MQ=255)                                    tGCCCGACGATCGTGAGGCCTTGCAACTGGTGGTAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTg                                                                                                                 <  1:29750/149‑1 (MQ=255)                                    tGCCCGACGATCGTGAGGCCTTGCAACTGGTGGTAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAATGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGa                                                                                                                                       >  1:311417/1‑127 (MQ=255)                                      cccGACGATCGTGAGGCCTTGCAACTGGTGGTAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGc                                                                                                                <  3:173670/148‑1 (MQ=255)                                      cccGACGATCGTGAGGCCTTGCAACTGGTGGTAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGc                                                                                                                <  1:243268/148‑1 (MQ=255)                                         gacgaTCGTGAGGCCTTGCAACTGGTGGTAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTAt                                                                                                            >  3:34399/1‑149 (MQ=255)                                         gacgaTCGTGAGGCCTTGCAACTGGTGGTAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTAt                                                                                                            >  1:249684/1‑149 (MQ=255)                                              gccagtcgcgccgcgaaccgatacgcaacagttgcggcaggccaatatcgccgaccaccgcCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCg                                                                                                                                                  >  6:12314‑M1/62‑106 (MQ=255)                                              gccagtcgcgccgcgaaccgatacgcaacagttgcggcaggccaatatcgccgaccaccgcCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCg                                                                                                                                                  <  5:12314‑M1/45‑1 (MQ=255)                                                 tGAGGCCTTGCAACTGGTGGTAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTcgc                                                                                                    >  5:308915/1‑149 (MQ=255)                                                 tGAGGCCTTGCAACTGGTGGTAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTcgc                                                                                                    >  7:307812/1‑149 (MQ=255)                                                        ttGCAACTGGTGGTAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGa                                                                                             >  2:113172/1‑149 (MQ=255)                                                          gCAACTGGTGGTAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCaa                                                                                                                       >  2:285552/1‑121 (MQ=255)                                                          gCAACTGGTGGTAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCaa                                                                                                                       <  1:285552/121‑1 (MQ=255)                                                          gCAACTGGTGGTAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑c                                                                                           <  1:193456/148‑1 (MQ=255)                                                             aCTGGTGGTAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑ctggc                                                                                       <  1:238339/149‑1 (MQ=255)                                                                 gtggtAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑ctggccgat                                                                                   >  1:297789/1‑149 (MQ=255)                                                                 gtggtAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑ctggccgat                                                                                   >  2:279392/1‑149 (MQ=255)                                                                 gtggtAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑ctggccg                                                                                     <  5:36763/147‑1 (MQ=255)                                                                 gtggtAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑ctggccg                                                                                     <  5:31229/147‑1 (MQ=255)                                                                        ctGGCGAGGCCAGTTTCGCCGTGCTGGTTGAAGCGGAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGGGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATGGGTGCGCGGCGCGA‑ctggccgatgctggc                                                                             <  7:61115/147‑1 (MQ=255)                                                                           gccaggcgagTTTCGGCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGGTGGCGGTGGTCGGCGATATTGGCCTGCGGCTGCTGGTGCGTATCGGTTCGCGGCGCGA‑ctggccgatgctggc                                                                             >  8:61115/1‑145 (MQ=255)                                                                             caggccagTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑ctggccgatgctggccgatg                                                                        >  2:266510/1‑148 (MQ=255)                                                                               ggccagTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTAc                                                                     >  4:231590/1‑149 (MQ=255)                                                                                gccagTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACt                                                                    >  6:205550/1‑149 (MQ=255)                                                                                 ccagTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACtt                                                                   >  6:304061/1‑149 (MQ=255)                                                                                    gTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGc                                                                                                                         >  7:78979/1‑93 (MQ=255)                                                                                    gTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGc                                                                                                                         <  8:78979/93‑1 (MQ=255)                                                                                         gCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACTTGAACGTgg                                                           <  2:249684/149‑1 (MQ=255)                                                                                         gCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACTTGAACGTgg                                                           <  4:285311/149‑1 (MQ=255)                                                                                          ccGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACTTGAACGTGGc                                                          >  8:5228/1‑149 (MQ=255)                                                                                            gTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACTTGAACGTGGCtt                                                        <  6:54775/149‑1 (MQ=255)                                                                                               cTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACTTGAACGTGGCTTGc                                                      <  3:231590/148‑1 (MQ=255)                                                                                                 ggATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACTTGAACGTGGCTTGCAgg                                                   >  4:330203/1‑149 (MQ=255)                                                                                                     gAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCg                                                                                                          >  1:120673/1‑91 (MQ=255)                                                                                                     gAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCg                                                                                                          <  2:120673/91‑1 (MQ=255)                                                                                                      aaGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACTTGAACGTGGCTTGCAGGCCGt                                               <  4:34399/148‑1 (MQ=255)                                                                                                      aaGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACTTGAACGTGGCTTGCAGGCCGTg                                              >  5:180322/1‑149 (MQ=255)                                                                                                      aaGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACTTGAACGTGGCTTGCAGGCCGTg                                              <  7:5228/149‑1 (MQ=255)                                                                                                        cgccagctcaccgaactcgctctcgcgcgacaggcggctgagctgGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑ctggc                                                                                       >  6:12314‑M2/46‑106 (MQ=255)                                                                                                        cgccagctcaccgaactcgctctcgcgcgacaggcggctgagctgGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑ctggc                                                                                       <  5:12314‑M2/61‑1 (MQ=255)                                                                                                         gccagctcaccgaactcgctctcgcgcgacaggcggctgagctgGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATAGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACTTGAACGTGGCTTGCAGGCCGTGCCg                                           >  6:183910‑M2/45‑149 (MQ=255)                                                                                                          gcAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGACCTGGCCGATGCTGGCCGATGTACTTGAACGTGGCTTGCAGGCCGTGCCg                                           <  1:279392/149‑1 (MQ=255)                                                                                                          ccagctcaccgaactcgctctcgcgcgacaggcggctgagctgGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACTTGAACGTGGCTTGCAGGCCGTGCCgg                                          >  1:256516‑M2/44‑149 (MQ=255)                                                                                                               TCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACTTGAACGTGGCTTGCAGGCCGTGCCGGCCAAg                                     <  7:137329‑M1/149‑1 (MQ=255)                                                                                                               TCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACTTGAACGTGGCTTGCAGGCCGTGCCGGCCAAg                                     <  5:76170‑M1/149‑1 (MQ=255)                                                                                                                 AGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACTTGAACGTGGCTTGCAGGCCGTGCCGGCCAAgg                                    >  5:205550‑M1/1‑148 (MQ=255)                                                                                                                   ccgccTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACtt                                                                   >  7:24585/1‑115 (MQ=255)                                                                                                                   ccgccTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACtt                                                                   <  8:24585/115‑1 (MQ=255)                                                                                                                   ccgccTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACTTGAACGTGGCTTGCAGGCTGTGCCGGCCAAGGAGc                                 >  7:225602/1‑149 (MQ=255)                                                                                                                      ccTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACTTGAACGTGGCTTGCAGGCCGTGCCGGCCAAGGAGCTgg                              <  8:307812/149‑1 (MQ=255)                                                                                                                         gTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACTTGAACGTGGCTTGCAGGCCGTGCCGGCCAAGGAGCTGGAg                            >  8:68708/1‑148 (MQ=255)                                                                                                                            gcgcgAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑ctggccgatgctggccga                                                                          <  6:337509/99‑1 (MQ=255)                                                                                                                            gcgcgAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑ctggccgatgctggccga                                                                          >  5:337509/1‑99 (MQ=255)                                                                                                                              gcgAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACTTGAACGTGGCTTGCAGGCCGTGCCGGCCAAGGAGCTGGAGCAACTg                      <  5:304061/149‑1 (MQ=255)                                                                                                                               cgAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACTTGAACGTGGCTTGCAGGCTGTGCCGGCCAAGGAGCTGGAGCAACTGc                     <  8:225602/149‑1 (MQ=255)                                                                                                                                        gTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACTTGAACGTGGCTTGCAGGCCGTGCCGGCCAAGGAGCTGGAGCAACTGCATCAGCGCt            <  6:180322/149‑1 (MQ=255)                                                                                                                                         ttCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCTCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACTTGAACGTGGCTTGCAGGCCGTGCCGGCCAAGGAGCTGGAGCAACTGCATCAGCGCTg           >  8:124137/1‑149 (MQ=255)                                                                                                                                             gTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACTTGAACGTGGCTTGCAGGCCGTGCCGGCCAAGGAGCTGGAGCAACTGCATCAGCGCTGGTTg       >  7:3692/1‑149 (MQ=255)                                                                                                                                             gTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACTTGAACGTGGCTTGCAGGCCGTGCCGGCCAAGGAGCTGGAGCAACTGCATCAGCGCTGGTTg       <  2:297789/149‑1 (MQ=255)                                                                                                                                                agctgGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACTTGAACGTGGCTTGCAGGCCGTGCCGGCCAAGGAGCTGGAGCAACTGCATCAGCGCTGGTTGCAg    >  7:296018‑M2/6‑149 (MQ=255)                                                                                                                                                agctgGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACTTGAACGTGGCTTGCAGGCCGTGCCGGCCAAGGAGCTGGAGCAACTGCATCAGCGCTGGTTGCAg    <  4:50023‑M2/144‑1 (MQ=255)                                                                                                                                                  ctgGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACTTGAACGTGGCTTGCAGGCCGTGCCGGCCAAGGAGCTGGAGCAACTGCATCAGCGCTGGTTGCAGcc  <  2:256516‑M2/146‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   GCGCGGCAACTACGGCAACCTCAACCTGCAGGGGGTGCCCGACGATCGTGAGGCCTTGCAACTGGTGGTAGGTGGCCAGGCCAGTTTCGCCGTGCTGGATGAAGCGCAGCTCAGCCGCCTGTCGCGCGAGAGCGAGTTCGGTGAGCTGGCGGTGGTCGGCGATATTGGCCTGCCGCAACTGTTGCGTATCGGTTCGCGGCGCGA‑CTGGCCGATGCTGGCCGATGTACTTGAACGTGGCTTGCAGGCCGTGCCGGCCAAGGAGCTGGAGCAACTGCATCAGCGCTGGTTGCAGCC  >  NC_002947/496626‑496919

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.