New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3611287	61 (1.030)	3 (0.050)	3/244	NT	5.1%	coding (2397/3396 nt)	mcoA	Mn(II) copper oxidase A
	?	NC_002947	= 3611333	54 (0.960)					coding (2351/3396 nt)	mcoA	Mn(II) copper oxidase A

CTTGCCGTCGCGGCTAAGAATCACGCCTTCCTCGAAGTGCACGTGTACCGGGTGGCTCCAGCCATTGCCGCCGTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCACGGGGTGGTGTCCGTGCCGTCAGAGCGGCCAAAGATGAACTCGCGGTGGCGAGCATCCTTGAGTTTGGCCTGGTCGGCTGCG  >  NC_002947/3611185‑3611476                                                                                                                                                     |                                                                                                                                                 cTTGCCGTCGCGGCTAAGAATCACGCCTTCCTCGAAGTGCACGTGTACCGGGTGGCTCCAGCCATTGCCGCCGTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTtgcggtg                                                                                                                                                  <  7:172701/149‑1 (MQ=255) cTTGCCGTCGCGGCTAAGAATCACGCCTTCCTCGAAGTGCACGTGTACCGGGTGGCTCCAGCCATTGCCGCCGTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTtgcggtg                                                                                                                                                  >  1:89940/1‑149 (MQ=255)                  gAATCACGCCTTCCTCGAAGTGCACGTGTACCGGGTGGCTCCAGCCATTGCCGCCGTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGt                                                                                                                                >  8:56475/1‑149 (MQ=255)                  gAATCACGCCTTCCTCGAAGTGCACGTGTACCGGGTGGCTCCAGCCATTGCCGCCGTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGt                                                                                                                                >  8:315663/1‑149 (MQ=255)                  gAATCACGCCTTCCTCGAAGTGCACGTGTACCGGGTGGCTCCAGCCATTGCCGCCGTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGt                                                                                                                                <  2:108699/149‑1 (MQ=255)                    aTCACGCCTTCCTCGAAGTGCACGTGTACCGGGTGGCTCCAGCCATTGCCGCCGTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTgg                                                                                                                              <  5:83042/149‑1 (MQ=255)                       aCGCCTTCCTCGAAGTGCACTTGTACCGGGTGGCTCCAGCCATTGCCGCCGTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCCGTGGACTGGTTGGCCAGTTTCGGTGCGG‑CACTGATACGGCGTGGGt                                                                                                                            <  6:325392/148‑1 (MQ=255)                       aCGCCTTCCTCGAAGTGCACGTGTACCGGGTGGCTCCAGCCATTGCCGCCGTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGt                                                                                                                            <  1:43888/148‑1 (MQ=255)                         gCCTTCCTCGAAGTGCACGTGTACCGGGTGGCTCCAGCCATTGCCGCCGTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCa                                                                                                                         >  7:352236/1‑149 (MQ=255)                         gCCTTCCTCGAAGTGCACGTGTACCGGGTGGCTCCAGCCATTGCCGCCGTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCa                                                                                                                         >  3:125520/1‑149 (MQ=255)                          ccTTCCTCGAAGTGCACGTGTACCGGGTGGCTCCAGCCATTGCCGCCGTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCAt                                                                                                                        <  3:188400/149‑1 (MQ=255)                              ccTCGAAGTGCACGTGTACCGGGTGGCTCCAGCCATTGCCGCCGTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTg                                                                                                                    >  5:47675/1‑149 (MQ=255)                                tCGAAGTGCACGTGTACCGGGTGGCTCCAGCCATTGCCGCCGTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTg                                                                                                                    >  5:328711/1‑147 (MQ=255)                                  gcaGTGCACGCGTACCGGGTGGCTCCAGCCATTGCCGCCGTTGACGATTTTCCCCACTTCCCGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTa                                                                                                                  <  4:362447/145‑1 (MQ=255)                                  gAAGTGCACGTGTACCGGGTGGCTCCAGCCATTGCCGCCGTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTa                                                                                                                  <  5:166800/147‑1 (MQ=255)                                    aGTGCACGTGTACCGGGTGGCTCCAGCCATTGGCGCCGTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGcc                                                                                                               <  6:228526/148‑1 (MQ=255)                                        cACGTGTACCGGGTGGCTCCAGCCATTGCCGCCGTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAgc                                                                                                          >  7:948/1‑149 (MQ=255)                                             gtACCGGGTGGCTCCAGCCATTGCCGCCGTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCTGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGccgccg                                                                                                     >  3:123366/1‑149 (MQ=255)                                                        cTCCAGCCATTGCCGCCGTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGAt                                                                                          <  5:59550/149‑1 (MQ=255)                                                         tCCAGCCATTGCCGCCGTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATg                                                                                         >  3:119384/1‑149 (MQ=255)                                                         tCCAGCCATTGCCGCCGTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATg                                                                                         >  2:106866/1‑149 (MQ=255)                                                           cAGCCATTGCCGCCGTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATg                                                                                         <  5:155044/147‑1 (MQ=255)                                                           cAGCCATTGCCGCCGTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGt                                                                                       <  7:315663/149‑1 (MQ=255)                                                             gCCATTGCCGCCGTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGAt                                                                                          >  7:111779/1‑144 (MQ=255)                                                             gCCATTGCCGCCGTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGAt                                                                                          <  8:111779/144‑1 (MQ=255)                                                               cATTGCCGCCGTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGCTGGACTGGTTGGCAAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCAc                                                                                   >  2:159921/1‑149 (MQ=255)                                                                 ttGCCGCCGTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCACgg                                                                                 <  2:89940/149‑1 (MQ=255)                                                                   gccgccGTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCACggg                                                                                <  3:71296/148‑1 (MQ=255)                                                                     cgccgTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCACGGggtg                                                                             <  8:948/149‑1 (MQ=255)                                                                     cgccgTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCAACGTCGGTGGACTGGTTGGACAGTTGCGGTTCGG‑CACTGATACGGCGTGGGTCCATGATGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCAACGGggtg                                                                             >  7:155787/1‑149 (MQ=255)                                                                                aTTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCACGGGGTGGTGTCCGTGcc                                                                  <  1:106866/149‑1 (MQ=255)                                                                                  tttCCACTGTTCCAGGGTGCGGTCGCGGGTGAATCGACCGTCGGTTGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCTTGGGTCCATGCTGTAGCCTAAGCCGCCGTCGGTCTTGATGGTACACGGGTTGGTGTCCGTGCCg                                                                 <  1:159921/148‑1 (MQ=255)                                                                                       acacTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCACGGGGTGGTGTCCGTGCCGTCagag                                                           >  4:340263/1‑149 (MQ=255)                                                                                        cacTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCACGGGGTGGTGTCCGTGCCGTCAGAGc                                                          <  4:119384/149‑1 (MQ=255)                                                                                        cacTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCACGGGGTGGTGTCCGTGCCGTCAGAGc                                                          >  2:362748/1‑149 (MQ=255)                                                                                         acTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCTGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCACGGGGTGGTGTCCGTGCCGTCAGAGCg                                                         <  4:123366/149‑1 (MQ=255)                                                                                              cAGGGTGCGGTCGCCGCTGAAACCACCTGAGGTGGACTGGTTGGCCAGTTGCGTTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGTTTGTCCACGGGGTGGGGTCCGTGCCGTCATAGCGGCCa                                                     <  2:143679/148‑1 (MQ=255)                                                                                               aGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGcggcaccctggaagtgtggaaaatcgtcaacggcggcaatggctggagccacccggtacacgtgcacttcgaggaaggcgtgattcttagccgc                                                    <  6:270057‑M2/149‑95 (MQ=255)                                                                                                   tGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGcggcaccctggaagtgtggaaaatcgtcaacggcggcaatggctggagccacccggtacacgtgcacttcgaggaaggcgtgattcttagccgcgacg                                                <  1:176528‑M2/149‑99 (MQ=255)                                                                                                      cGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCACGGGGTGGTGTCCGTGCCGTCAGAGCGGCCAAAGATGAAc                                            >  1:45605/1‑149 (MQ=255)                                                                                                         cgccgcTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGGACACTGATACGGGGTGGGTCCTTGCGGTGGCCAACGCCGCGGTCGGTCTTGAGGGTCCCCGGGGTGGGGTCCGTGCCGTCTGGGCGGCCAACGTTGACCTc                                          >  1:88987/1‑149 (MQ=255)                                                                                                          gccgcTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGcggcaccctggaagtgtggaaaatcgtcaacggcggcaatggctggagccacccggtacacgtgcacttcgaggaaggcgtgattcttagccgcgacggcaaggc                                         >  5:270057‑M2/1‑44 (MQ=255)                                                                                                               tGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCCCGGGGTGGTGTCCGTGCCGTCAGAGCGGCCAAAGATGAACTCGCGGTgg                                   >  5:311067/1‑149 (MQ=255)                                                                                                                  aaCCTCCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATAGGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCACGGggtg                                                                             <  4:87363/104‑1 (MQ=255)                                                                                                                  aaCCACCTTCGGTGGACTGGTTGGCGAGTTGGGGGGCGG‑CACTGATCCGGCGGGGGTCCATGCTGTAGCCTAAGCCGCCGTCGGTCTTGATGGTCCACGGGGTGTTGTCCGTGCCGTCAGAGCGGCCAAAGATGAACTCGCGGTTGCGa                                <  8:155787/149‑1 (MQ=255)                                                                                                                  aaCCACCGTCGGTGGACTGGTTGGCCAGATGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCACGGggtg                                                                             >  3:87363/1‑104 (MQ=255)                                                                                                                        cGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCACGGGGTGGTGTCCGTGCCGTCAGAGCGGCCAAAGATGAACTCGCGGTGGCGAGCATcc                          <  1:362748/149‑1 (MQ=255)                                                                                                                             gTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCAATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCACGGGGTGGTGTCCGTGCCGTCAGAGCGGCCAAAGATGAACTCGCGGTGGCGAGCATCCTTGAg                     >  1:85273/1‑149 (MQ=255)                                                                                                                                gACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCACGGGGTGGTGTCCGTGCCGTCAGAGCGGCCAAAGATGAACTCGCGGTGGCGAGCATCCTTGAGttt                  >  6:240021/1‑149 (MQ=255)                                                                                                                                 aCTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCACGGGGTGGTGTCCGTGCCGTCAGAGCGGCCAAAGATGAACTCGCGGTGGCGAGCATCCTTGAGTTTg                 <  6:328711/149‑1 (MQ=255)                                                                                                                                 aCTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGGGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCACGGGGTGGTGTCCGTGCCGTCAGAGCGGCCAAAGATGAACTCGCGGTGGCGAGCATCCTTGAGTTTg                 <  8:352236/149‑1 (MQ=255)                                                                                                                                     gTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCACGGGGTGGTGTCCGTGCCGTCAGAGCGGCCAAAGATGAACTCGCGGTGGCGAGCATCCTTGAGTTTGGcc              <  3:340263/148‑1 (MQ=255)                                                                                                                                     gTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCACGGGGTGGTGTCCGTGCCGTCAGAGCGGCCAAAGATGAACTCGCGGTGGCGAGCATCCTTGAGTTTGGCCt             >  1:135078/1‑149 (MQ=255)                                                                                                                                         gCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCACGGGGTGGTGTCCGTGCCGTCAGAGCGGCCAAAGATGAACTCGCGGTGGCGAGCATCCTTGAGTTTGGCCTGGTc         <  2:135078/149‑1 (MQ=255)                                                                                                                                           cAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCACGGggt                                                                              >  5:355690/1‑78 (MQ=255)                                                                                                                                           cAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCACGGggt                                                                              <  6:355690/78‑1 (MQ=255)                                                                                                                                             gTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCACGGGGTGGTGTCCGTGCCGTCa                                                              >  6:220843/1‑92 (MQ=255)                                                                                                                                             gTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCACGGGGTGGTGTCCGTGCCGTCa                                                              <  5:220843/92‑1 (MQ=255)                                                                                                                                             gTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCACGGGGTGGTGTCCGTGCCGTCAGAGCGGCCAAAGATGGACTCGCGGTGGCGAGCATCCTTGAGTTTGGCCTGGTCGGCt     <  6:47675/149‑1 (MQ=255)                                                                                                                                                 cggtgcgg‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCACGGGGTGGTGTCCGTGCCGTCAGAGCGGCCAAAGATGAACTCGCGGTGGCGAGCATCCTTGAGTTTGGCCTGGTCGGCTgcg  <  2:45605/148‑1 (MQ=255)                                                                                                                                                 cggggcgg‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCACGGGGTGGTGTCCGTGCCGTCATAGCGGCCAAATATTAACTCGCGGTGGCGAGCATCCTTGAGTTTGGCCTGGTCGGCTgcg  <  7:56475/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                 CTTGCCGTCGCGGCTAAGAATCACGCCTTCCTCGAAGTGCACGTGTACCGGGTGGCTCCAGCCATTGCCGCCGTTGACGATTTTCCACACTTCCAGGGTGCCGTCGCCGCTGAAACCACCGTCGGTGGACTGGTTGGCCAGTTGCGGTGCGG‑CACTGATACGGCGTGGGTCCATGCTGTAGCCAAAGCCGCCGTCGGTCTTGATGGTCCACGGGGTGGTGTCCGTGCCGTCAGAGCGGCCAAAGATGAACTCGCGGTGGCGAGCATCCTTGAGTTTGGCCTGGTCGGCTGCG  >  NC_002947/3611185‑3611476

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.