New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3694599 =	53 (0.900)	4 (0.070)	4/248	NT	7.1%	coding (1569/2502 nt)	ligD	DNA ligase D
	?	NC_002947	3694639 =	53 (0.930)					coding (1529/2502 nt)	ligD	DNA ligase D

GTGGTGGGGTCGATGACCCGGTCGGGGTGGGTCAGCCGCAGTTCACCCAGGTTCTCAGACGCCTTGGCCTGCTTGTTGCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGCGGTCGCAGCCAGTGCACACCACGCGCTTCGGCTCCGGCAGGCGGCGAGGGCAGGGCTGGCCTGGCGATTT  >  NC_002947/3694492‑3694783                                                                                                                                                     |                                                                                                                                                 agccgaagcgcgtggtgtgcactggctgcgaccgcagttgttggcggaagtcgcctttgcccagatgacccgtgacggcatcgtgcgccattcggtgttccacggcctGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCa                                                                                                                                                  >  5:197543‑M1/109‑149 (MQ=255)          tCGATGACCCGGTCGGGGTGGGTCAGCCGCAGTTCACCCAGGTTCTCAGACGCCTTGGCCTGCTTGTTGCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGaa                                                                                                                                        >  2:185888/1‑149 (MQ=255)            gATGACCCGGTCGGGGTGGGTCAGCCGCAGTTCACCCAGGTTCTCAGACGCCTTGGCCTGCTTGTTGCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGt                                                                                                                                            <  5:9082/143‑1 (MQ=255)            gATGACCCGGTCGGGGTGGGTCAGCCGCAGTTCACCCAGGTTCTCAGACGCCTTGGCCTGCTTGTTGCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGt                                                                                                                                            >  6:9082/1‑143 (MQ=255)                 cccGGTCGGGGTGGGTCAGCCGCAGTTCACCCAGGTTCTCAGACGCCTTGGCCTGCTTGTTGCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGaa                                                                                                                                 <  8:161653/149‑1 (MQ=255)                  ccGGTCGGGGTGGGTCAGCCGCAGTTCACCCATGTTCTCAGACGCCTTGGCCTGCTTGTTGCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAAt                                                                                                                                <  1:161595/149‑1 (MQ=255)                     gTCGGGGTGGGTCAGCCGCAGTTCACCCAGGTTCTCAGACGCCTTGGCCTGCTTGTTGCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGgc                                                                                                                             >  2:5542/1‑149 (MQ=255)                              ggtCAGCCGCAGTTCACCCAGGTTCTCAGACGCCTTGGCCTGCTTGTTGCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGc                                                                                                                    >  3:231205/1‑149 (MQ=255)                                tCAGCCGCAGTTCACCCAGGTTCTCAGACGCCTTGGCCTGCTTGTTGCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCg                                                                                                                  >  5:320438/1‑149 (MQ=255)                                       cAGTTCACCCAGGTTCTCAGACGCCTTGGCCTGCTTGTTGCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACggg                                                                                                           <  6:265954/149‑1 (MQ=255)                                             aCCCAGGTTCTCAGACGCCTTGGCCTGCTTGTTGCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCt                                                                                                     >  7:177713/1‑149 (MQ=255)                                               ccAGGTTCTCAGACGCCTTGGCCTGCTTGTTGCGGTTGGATACAGTTATTTGCGGGCATGCCGCGGTCCAGGTCAATGCCGGTTGCCCCATTGTCATCGCGCAGCCCGTGGAACACCGAATGGCGCACGATGCCGAAACGGGTCaaatg                                                                                                    >  1:83520/1‑145 (MQ=255)                                               ccAGGTTCTCAGACGCCTTGGCCTGCTTGTTGCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTgg                                                                                                   >  6:237391/1‑149 (MQ=255)                                                 aGGTTCTCAGACGCCTTGGCCTGCTTGTTGCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGc                                                                                                 <  2:46697/149‑1 (MQ=255)                                                      ctcAGACGCCTTGGCCTGCTTGTTGCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAg                                                                                             <  6:297451/148‑1 (MQ=255)                                                         aGACGCCTTGGCCTGCTTGTTGCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAacac                                                                                                                                     <  2:214787/105‑1 (MQ=255)                                                         aGACGCCTTGGCCTGCTTGTTGCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGc                                                                                           <  1:5542/147‑1 (MQ=255)                                                         aGACGCCTTGGCCTGCTTGTTGCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGa                                                                                         >  8:103760/1‑149 (MQ=255)                                                            cccagatgacccgtgacggcatcgtgcgccattcggtgttccacggcctGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAgg                                                                                                                                                >  6:145440‑M1/50‑92 (MQ=255)                                                            cccagatgacccgtgacggcatcgtgcgccattcggtgttccacggcctGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAgg                                                                                                                                                <  5:145440‑M1/43‑1 (MQ=255)                                                               cTTGGCCTGCTTGTTGCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATg                                                                                                                               >  3:68924/1‑105 (MQ=255)                                                               cTTGGCCTGCTTGTTGCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATg                                                                                                                               <  4:68924/105‑1 (MQ=255)                                                               cTTGGCCTGCTTGTTGCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCg                                                                                   <  7:261403/149‑1 (MQ=255)                                                                  ggCCTGCTTGTTGCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGc                                                                                  <  8:177713/147‑1 (MQ=255)                                                                   gCCTGCTTGTTGCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACgg                                                                                                            <  7:349834/120‑1 (MQ=255)                                                                   gCCTGCTTGTTGCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACgg                                                                                                            >  8:349834/1‑120 (MQ=255)                                                                     cTGCTTGTTGCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCcaac                                                                              >  1:334482/1‑148 (MQ=255)                                                                     cTGCTTGTTGCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCcaac                                                                              >  1:175955/1‑148 (MQ=255)                                                                          tgttgCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGc                                                                        >  2:101287/1‑149 (MQ=255)                                                                           gttgCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGc                                                                        <  5:237391/148‑1 (MQ=255)                                                                             tgCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGCGGt                                                                     >  8:360194/1‑149 (MQ=255)                                                                              gCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGCGGt                                                                     <  7:244223/148‑1 (MQ=255)                                                                                ggTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGCGGTCGc                                                                  <  7:103760/149‑1 (MQ=255)                                                                                    ggATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGCGGTCGCAGc                                                               <  7:360194/148‑1 (MQ=255)                                                                                      aTACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGCGGTCGCAGCCAg                                                            >  2:130476/1‑149 (MQ=255)                                                                                          aGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGCGGTCGCAGCCAGTGca                                                        >  1:12392/1‑149 (MQ=255)                                                                                           gTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCcaacaa                                                                            <  8:358418/128‑1 (MQ=255)                                                                                           gTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCcaacaa                                                                            >  7:358418/1‑128 (MQ=255)                                                                                            tt‑tttGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATTCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGCGGTCGCAGCCAGTGcaca                                                      <  6:320438/149‑1 (MQ=255)                                                                                                    gggCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAAt                                                                                                                                <  1:233887/68‑1 (MQ=255)                                                                                                    gggCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAAt                                                                                                                                >  2:233887/1‑68 (MQ=255)                                                                                                      gCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGCGGTCGCa                                                                 >  5:212406/1‑129 (MQ=255)                                                                                                      gCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGCGGTCGCa                                                                 <  6:212406/129‑1 (MQ=255)                                                                                                       cATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGCGGTCGCAGCCAGTGCACACCACGCGCtt                                            <  2:83520/149‑1 (MQ=255)                                                                                                        aTGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGTCAAAGGCGACTTCCGCCAACAACTGCGGTCGCAGCCAGTGCACACCACGCGCTTc                                           <  1:103164/149‑1 (MQ=255)                                                                                                          cctgcgcgatgacaaggcggcaaccgccattgacctggagcgcAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTggg                                                                                                  >  6:145440‑M2/44‑92 (MQ=255)                                                                                                          cctgcgcgatgacaaggcggcaaccgccattgacctggagcgcAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTggg                                                                                                  <  5:145440‑M2/49‑1 (MQ=255)                                                                                                            tgcgcgatgacaaggcggcaaccgccattgacctggagcgcAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGCGGTCGCAGCCAGTGCACACCACGCGCTTCGGCt                                       >  5:197543‑M2/42‑149 (MQ=255)                                                                                                                 tgacaaggcggcaaccgccattgacctggagcgcgcAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGCGGTCGCAGCCAGTGCACACCACGCGCTTCGGCTCCgg                                   >  6:165101‑M2/37‑148 (MQ=255)                                                                                                                      gTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGCGGTCGCAGCCAGTGCACACCACGCGCTTCGGCTCCGGCAggcg                             >  5:132046/1‑149 (MQ=255)                                                                                                                       tCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGCGGTCGCAGCCAGTGCACACCACGCGCTTCGGCTCCGGCAggcgg                            >  6:109674/1‑149 (MQ=255)                                                                                                                       tCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACCATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGCGGTCGCAGCCAGTGCACACCACGCGCTTCGGCTCCGGCAggcgg                            >  6:34759/1‑149 (MQ=255)                                                                                                                          aTGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGCGGTCGCAACCAGTGCACACCACGCGCTTCGGCTCCGGCAGGCGGCGa                         <  1:185888/149‑1 (MQ=255)                                                                                                                              cGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGgc                                                                                                                             <  2:63851/45‑1 (MQ=255)                                                                                                                              cGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGgc                                                                                                                             >  1:63851/1‑45 (MQ=255)                                                                                                                                  tGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGCGGTCGCAGCCAGTGCACACCACGCGCTTCGGCTCCGGCAGGCGGCGagggcaggg                 >  1:144951/1‑149 (MQ=255)                                                                                                                                     cgccTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGCGGTCGCAGCCAGTGCACACCACGCGCTTCgg                                         <  2:231048/122‑1 (MQ=255)                                                                                                                                     cgccTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGCGGTCGCAGCCAGTGCACACCACGCGCTTCGGCTCCGGCAGGCGGCGAGGGCAGGGctg              >  5:96381/1‑149 (MQ=255)                                                                                                                                      gccTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGCGGTCGCAGCCAGTGCACACCACGCGCTTCGGCTCCGGCAGGCGGCGAGGGCAGGGctgg             >  6:285660/1‑149 (MQ=255)                                                                                                                                           gTCTTCGCGCAGGCCGTGGAACAACGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGCGGTCGCAGCCAGTGCACACCACGCGCTTCGGCTCCGTCAGGCGGCGAGGGCAGGGctggcctg         <  4:231205/148‑1 (MQ=255)                                                                                                                                            tCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGCGGTCGCAGCCAGTGCACACCACGCGCTTCGGCTCCGGCAGGCGGCGAGGGCAGGGctggcctggc       >  5:62664/1‑149 (MQ=255)                                                                                                                                             cATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGCGGTCGCAGCCAGTGCACACCACGCGCTTCGGCTCCGGCAGGCGGCGAGGGCAGGGctggcctggc       >  7:181435/1‑148 (MQ=255)                                                                                                                                              aTCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGCGGTc                                                                    >  5:57915/1‑86 (MQ=255)                                                                                                                                              aTCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGCGGTc                                                                    <  6:57915/86‑1 (MQ=255)                                                                                                                                               tCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGCGGTCGCAGCCAGTGCACACCACGCGCTTCGGCTCCGGCAGGCGGCGAGGGCAGGGCTGGCCTGGCGAt    >  3:92861/1‑149 (MQ=255)                                                                                                                                                 gcgcAGGCCGTGGAACACCGAATGGCGCACGATGCCGTGACGGGTCATCTGGGCCAAGGCGACGTCCGCCCACAACTGCGGTGGCAGCCAGTGCACACCACGCGCGTCGGCTCCGGCAGGCGGCGAGGGCAGGGCTGGCCTGGCGAttt  >  1:66998‑M2/5‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                 GTGGTGGGGTCGATGACCCGGTCGGGGTGGGTCAGCCGCAGTTCACCCAGGTTCTCAGACGCCTTGGCCTGCTTGTTGCGGTTGGATACAGTT‑TTTGCGGGCATGGCGCGCTCCAGGTCAATGGCGGTTGCCGCCTTGTCATCGCGCAGGCCGTGGAACACCGAATGGCGCACGATGCCGTCACGGGTCATCTGGGCAAAGGCGACTTCCGCCAACAACTGCGGTCGCAGCCAGTGCACACCACGCGCTTCGGCTCCGGCAGGCGGCGAGGGCAGGGCTGGCCTGGCGATTT  >  NC_002947/3694492‑3694783

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.