| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2230049 | 4 (0.070) | 51 (0.840) | 42/284 | 0.6 | 92.7% | coding (13/636 nt) | PP_1968 | TetR family transcriptional regulator |
| ? | NC_002947 | 4536203 = | NA (NA) | intergenic (+730/‑85) | PP_4022/PP_4024 | hypothetical protein/transposase | |||||
Only 100 of 117 total aligned reads displayed.
ATACGCCAACGTTTCGTTCCTCCCGCAGCGCATGGCCGTATGCATCGTGAAACACAGACATGCGTGGATGATCCGTGCAATTTCCCGCAAGTTAGGCATAATAAACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTTCTCGAGCAAGGTGAAGACAGCGTCACCGTCGAGATGATCGCCGACGCCGTGGGCATCGGCAAAGGCACGATCTACAAGCACT > NC_002947/2229904‑2230196 | cgccacgtcctggagcgactgccgcacgcctcatcggtagcagactacgaagcgctgctgccatggaactgttcgccagagatgccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTc > 2:304737‑M2/139‑149 (MQ=255)cgccacgtcctggagcgactgccgcacgcctcatcggtagcagactacgaagcgctgctgccatggaactgttcgccagagatgacacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACATc > 2:309680‑M2/139‑149 (MQ=255) gccacgtcctggagcgactgccgcacgcctcatcggtagcagactacgaagcgctgctgccatggaactgttcgccagagatgccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCg > 8:26701‑M2/138‑149 (MQ=255) tcgCCAACGTTTCGTTCCTCCCGCAGCGCATGGCCGTATGCATCGTGAAACACAGACATGCGTGGATGATCCGTGCAATTTCCCGCAAGTTAGGCATAATAAACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaag < 5:358210‑M1/148‑6 (MQ=255) gCCAACGTTTCGTTCCTCCCGCAGCGCATGGCCGTATGCATCGTGAAACACAGACATGCGTGGATGATCCGTGCAATTTCCCGCAAGTTAGGCATAATAAACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaag > 6:358210‑M1/1‑142 (MQ=255) gactgccgcacgcctcatcggtagcagacaacgaagcgctgctgccatggaactgttcgccagagatgccaaggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACATCGTAAGGTCCGTGAGtt > 6:276600‑M2/123‑149 (MQ=255) ctgccgcacgcctcatcggtagcagactacgaagcgctgctgccatggaactgttcgccagagatgccacggtaactttggcttccaccttgtggtaggtgggcttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTc < 1:254824‑M2/29‑1 (MQ=255) tccCGCAGCGCATGGCCATATGCATCGTGAAACACAGACATGCGTGGATGATCCGTGCAATTTCCCGCAAGTTAGGCATAATAAACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaagggatccatc < 7:198204‑M1/140‑15 (MQ=255) tccCGCAGCGCATGGCCATATGCATCGTGAAACACAGACATGCGTGGATGATCCGTGCAATTTCCCGCAAGTTAGGCATAATAAACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaagggatccatc > 8:198204‑M1/1‑126 (MQ=255) ctcatcggtagcagactacgaagcgctgctgccatggaactgttcgccagagatgccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGaa < 4:44182‑M2/40‑1 (MQ=255) ctcatcggtagcagactacgaagcgctgctgccatggaactgttcgccagagatgccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGaa > 3:44182‑M2/110‑149 (MQ=255) catcggtagcagactacgaagcgctgctgccatggaactgttcgccagagatgccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGaa > 3:284557‑M2/108‑147 (MQ=255) atcggtagcagactacgaagcgctgctgccatggaactgttcgccagagatgccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAAc < 3:257596‑M2/41‑1 (MQ=255) atcggtagcagactacgaagcgctgctgccatggaactgttcgccagagatgccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACa < 4:307872‑M2/42‑1 (MQ=255) ccGTATGCATCGTGAAACACAGACATGCGTGGATGATCCGTGCAATTTCCCGCAAGTTAGGCATAATAAACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaagggatccatcatccccacattccaaccgtccacc > 1:71047‑M1/1‑111 (MQ=255) cGTATGCATCGTGAAACACAGACATGCGTGGATGATCCGTGCAATTTCCCGCAAGTTAGGCATAATAAACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaagggatccatcatccccacattccaaccgtccacct > 8:144293‑M1/1‑110 (MQ=255) gcagactacgaagcgctgctgccatggaactgttcgccagagatgccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATcc > 1:183811‑M2/100‑149 (MQ=255) cagactacgaagcgctgctgccatggaactgttcgccagagatgccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCt > 6:233655‑M2/99‑149 (MQ=255) gCATCGTGAAACACAGACATGCGTGGATGATCCGTGCAATTTCCCGCAAGTTAGGCATAATAAACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaaggg < 1:308141‑M1/112‑8 (MQ=255) gCATCGTGAAACACAGACATGCGTGGATGATCCGTGCAATTTCCCGCAAGTTAGGCATAATAAACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaaggg > 2:308141‑M1/1‑105 (MQ=255) cATCGTGAAACACAGACATGCGTGGATGATCCGTGCAATTTCCCGCAAGTTAGGCATAATAAACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaagggatccatcatccccacattccaaccgtccacctgattcc > 1:170236‑M1/1‑104 (MQ=255) tCGTGAAACACAGACATGCGTGGATGATCCGTGCAATTTCCCGCAAGTTAGGCATAATAAACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaagggatccatcatccccacattccaaccgtccacctgattccc > 1:158917‑M1/1‑102 (MQ=255) cgaagcgctgctgccatggaactgttcgccagagatgccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATAcc < 4:330799‑M2/58‑1 (MQ=255) cgaagcgctgctgccatggaactgttcgccagagatgccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATAcc > 3:322355‑M2/92‑149 (MQ=255) gaagcgctgctgccatggaactgttcgccagagatgccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACcg > 8:300857‑M2/91‑149 (MQ=255) gaagcgctgctgccatggaactgttcgccagagatgccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGCGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACcg > 5:120122‑M2/91‑149 (MQ=255) acaGACATGCGTGGATGATCCGTGCAATTTCCCGCAAGTTAGGCATAATAAACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaagggatccatcatccccacatt > 6:92973‑M1/1‑93 (MQ=255) acaGACATGCGTGGATGATCCGTGCAATTTCCCGCAAGTTAGGCATAATAAACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaagggatccatcatccccacatt > 2:33861‑M1/1‑93 (MQ=255) acaGACATGCGTGGATGATCCGTGCAATTTCCCGCAAGTTAGGCATAATAAACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaagggatccatcatccccacatt < 1:33861‑M1/118‑26 (MQ=255) tgctgccatggaactgttcgccagagatgccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTc > 4:291039‑M2/84‑147 (MQ=255) cATGCGTGGATGATCCGTGCAATTTCCCGCAAGTTAGGCATAATAAACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaagggatccatcatccccacattccaaccgtccacctgattcccgatgctgtgctccc < 8:259791‑M1/148‑61 (MQ=255) catggaactgttcgccagagatgccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGtt < 7:219146‑M2/72‑1 (MQ=255) atggaactgttcgccagagatgccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCTTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGttt < 1:309680‑M2/73‑1 (MQ=255) atggaactgttcgccagagatgccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGttt > 6:144027‑M2/77‑149 (MQ=255) atggaactgttcgccagagatgccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGttt < 1:304737‑M2/73‑1 (MQ=255) gTGGATGATCCGTGCAATTTCCCGCAAGTTAGGCATAATAAACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaagggatccatcatccccacattccaaccgtccacctgattcccgatgctgtgctcccgatttc > 1:274365‑M1/1‑83 (MQ=255) gaactgttcgccagagatgccactgtaactttggcttccaccttgtggtaggtgggtttcatggatcggttacGAAAGAACCTCGTAAGTTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTtctc < 5:276600‑M2/76‑1 (MQ=255) gatgatCCGTGCAATTTCCCGCAAGTTAGGCATAATAAACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaagggatccatcatccccacattccaaccgtccacctgattcccgatgctgtgctcccgatttctt < 1:143732‑M1/148‑69 (MQ=255) aactgttggccagagatgccaccgtatctttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCTAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTtctc < 7:296682‑M2/76‑1 (MQ=255) aactgttcgccagagatgccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACAGCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCATCGATACCGCGCTCAAGCTGTTtctc > 5:336551‑M2/73‑148 (MQ=255) actgttcgccagagatgccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTTCTCGa < 2:5278‑M2/78‑1 (MQ=255) ttcgccagagatgccacggtaactttggcttccacacttgtgttaggtggggttcagggaacggttacGAAAAAACCTCGTAAGGTCCGTGAGTTTCCCCGTCCCGAACAGCAAAACCTGCATACCGCGCACAAGCTGTTTCTCCaga > 1:52435‑M2/69‑147 (MQ=255) gttcgccagagatgccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTTCTCGAGc > 4:220682‑M2/69‑148 (MQ=255) atCCGTGCAATTTCCCGCAAGTTAGGCATAATATACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgaaagggatccatcatccccacattccaaccgtccacctgattcccgatgctgtgctcccgatttctttctg < 3:233580‑M1/148‑73 (MQ=255) tCCGTGCAATTTCCCGCAAGTTAGGCATAATAAACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaagggatccatcatccccacattccaaccgtccacctgattcccgatgctgtgctcccgatttctttctgga < 2:170236‑M1/149‑75 (MQ=255) cgccagagatgccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTTCTCGAGCAAg < 2:183811‑M2/83‑1 (MQ=255) gccagagatgccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTTCTCGAGCAAGGt < 5:144027‑M2/85‑1 (MQ=255) gccagagatgccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTTCTCGAGCAAGGt > 8:17873‑M2/65‑149 (MQ=255) gTGCAATTTCCCGCAAGTTAGGCATAATAAACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaagggatccatcatccccacattccaaccgtccacctgattcccgatgctgtgctcccgatttctttctg > 7:99976‑M1/1‑72 (MQ=255) agagatgccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTTCTCGAGCAAGGTg > 3:154037‑M2/62‑147 (MQ=255) agagatgccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTTCTCGAGCAAGGTg > 4:176123‑M2/62‑147 (MQ=255) agagatgccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTTCTCGAGCAAGGTGaa < 4:76541‑M2/88‑1 (MQ=255) agagatgccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGCGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTTCTCGAGCAAGGTGaa < 6:120122‑M2/88‑1 (MQ=255) ccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCt > 8:201372‑M2/55‑117 (MQ=255) ccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCt < 7:201372‑M2/63‑1 (MQ=255) ccacggtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTTCTCGAGCAAGGTGAAGACAGCg < 7:300857‑M2/95‑1 (MQ=255) ccGCAAGTTAGGCATAATAAACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaagggatccatcatccccacattccaaccgtccacctgattcccgatgctgtgctcccgatttctttctggagccagcccgccat > 3:22996‑M1/1‑62 (MQ=255) cGCAAGTTAGGCATAATAAACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaagggatccatcatccccacattccaaccgtccacctgattcccgatgctgtgctcccgatttctttctggagccagcccgccat > 3:118658‑M1/1‑61 (MQ=255) gCAAGTTAGGCATAATAAACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaagggatccatcatccccacattccaaccgtccacctgattcccgatgctgtgctcccgatttctttctggagccagcccgccatga < 4:118658‑M1/149‑90 (MQ=255) aaGTTAGGCATAATAAACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaagggatccatcatccccacattccaaccgtccacctgattcccgatgctgtgctcccgatttctttctggagccagcccgccatgatg > 7:62106‑M1/1‑58 (MQ=255) gtaactttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTTCTCGAGCAAGGTGAAGACAGCGTCAcc < 5:233655‑M2/100‑1 (MQ=255) aGGCATAATAAACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaagggatccatcatccccacattccaaccgtccacctgattcccgatgctgtgctcccgatttctttctggagccagc > 4:109519‑M1/1‑53 (MQ=255) aGGCATAATAAACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaagggatccatcatccccacattccaaccgtccacctgattcccgatgctgtgctcccgatttctttctggagccagc < 3:109519‑M1/133‑81 (MQ=255) tttggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTTCTCGAGCAAGGTGAAGACAGCGTCACCGTc > 4:197332‑M2/45‑147 (MQ=255) ggCATAATAAACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaagggatccatcatccccacattccaaccgtccacctgattcccgatgctgtgctcccgatttctttctggagccagcccgccatgatgcgcccc < 2:34487‑M1/149‑98 (MQ=255) ggcttccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTTCTCGAGCAAGGTGAAGACAGCGTCACCGTCgaga < 3:220682‑M2/107‑1 (MQ=255) ataataAACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaagggatccatcatccccacattccaaccgtccacctgattcccgatgctgtgctcccgatttctttctggagccagcccgccatgatgcgccccgac < 7:144293‑M1/149‑101 (MQ=255) ataaACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaagggatccatcatccccacattccaaccgtccacctgattcccgatgctgtgctcccgatttctttctggagccagcccgccatgatgcgccccgacag > 2:228130‑M1/1‑46 (MQ=255) ccaccttgtggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTTCTCGAGCAAGGTGAAGACAGCGTCACCGTCGAGATGATCg > 2:347256‑M2/37‑149 (MQ=255) aCCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaagggatacatcatccccacattccaacagtccacctgattcacgatcctgtgctcccttattcattctggagccagcccgccatgatgcgcaccgacagcaaag > 5:11569‑M1/1‑42 (MQ=255) cTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaagggatccatcatccccacattccaaccgtccacctgattcccgatgctgtgctcctgatttctttctggagccagcccgccatgatgcgccccgacagcaaagtcg > 7:13620‑M1/1‑38 (MQ=255) tggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTtct < 1:177859‑M2/75‑1 (MQ=255) tggtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTtct > 2:177859‑M2/29‑103 (MQ=255) gtaggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTTCTCGAGCAAGGTGAAGACAGCGTCACCGTCGAGATGATCGCCGACGCCGt > 7:244709‑M2/27‑149 (MQ=255) gATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaagggatccatcatccccacattccaaccgtccacctgattcccgatgctgtgctcctgatttctttctggagccagcccgccatgatgcgccccgacagcaaagtcgaaaaa < 8:13620‑M1/149‑116 (MQ=255) gATTGTCATCCAGTCCTTCCCATGCAGAAAGAACgtaagggatccatcatccccacattccaaccgtccacctgattcccgatgctgtgctcccgatttctttctggagccagcccgccatgatgcgccccgacagcaaagtcgaaa > 8:42782‑M1/1‑34 (MQ=255) ggtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTTCTCGAGCAAGGTGAAGACAGCGTCACCGTCGAGATGATCGCCGACGCCGTgg < 6:188555‑M2/125‑1 (MQ=255) gtggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTTCTCGAGCAAGGTGAAGACAGCGTCACCGTCGAGATGATCGCCGACGCCGTGGGc < 7:26701‑M2/127‑1 (MQ=255) ggggttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTTCTCGAGCAAGGTGAAGACAGCGTCACCGTCGAGATGATCGCCGACGCCGTGGGCAt < 3:176123‑M2/129‑1 (MQ=255) aTCCAGTCCTTCCCATGCAGAAATAACgtaagggatccatcatccccacattccaaccgtccacctgattcccgatgctgtgctcccgatttctttctggagccagcccgccatgatgcgccccgacagcaaagtcgaaaaagtctac > 1:134597‑M1/1‑27 (MQ=255) gttcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTTCTCGAGCAAGGTGAAGACAGCGTCACCGTCGAGATGATCGCCGACGCCGTGGGCATCgg > 7:38949‑M2/18‑149 (MQ=255) cAGTCCTTCCCATGCAGAAAGAACgtaagggatccatcatccccacattccaaccgtccacctgattcccgctgctgtgctcccgatttctttctggagccagcccgccatgatgcgccccgacagcaaagtcgaaaaagtctacctc > 6:319651‑M1/1‑24 (MQ=255) tcatggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTTCTCGAGCAAGGTGAAGACAGCGTCACCGTCAAGATGATCGCCGACGCCGTGGGCATCGGc > 3:319847‑M2/16‑148 (MQ=255) aGTCCTTCCCATGCAGAAAGAACgtaagggatccatcatccccacattccaaccgtccacctgattcccgatgctgtgctcccgatttctttctggagccagcccgccatgatgcgccccgacagcaaagtcgaaaaa > 3:49608‑M1/1‑23 (MQ=255) atggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTTCTCGAGCAAGGTGAAGACAGCGTCACCGTCGAGATGATCGCCGACGCCGTGGGCATCGGCaaa < 6:22898‑M2/136‑1 (MQ=255) tggatcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTTCTCGAGCAATGTGAAGACAGCGTCACCGTCGAGATGATCGCCGACGCCGTGGGCATCGGCAAAg < 4:284557‑M2/137‑1 (MQ=255) atcggttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTTCTCGAGCAAGGTGAAGACAGCGTCACCGTCGAGATGATCGCCGACGCCGTGGGCATCGGCAAAGGCa > 5:193579‑M2/10‑149 (MQ=255) cATGCAGAAAGAACgtaggggatccatcatccccacattccaaccgtccacctgattcccgatgctgtgctcccgatttctttctggagccagcccgccatgatgcgccccgacagcaaagtcgaaa > 6:208688‑M1/1‑14 (MQ=255) cATGCAGAAAGAACgtaggggatccatcatccccacattccaaccgtccacctgattcccgatgctgtgctcccgatttctttctggagccagcccgccatgatgcgccccgacagcaaagtcgaaa < 5:208688‑M1/127‑114 (MQ=255) aTGCAGAAAGAACgtaagggatccatcatccccacattccaaccgtccacctgattaccgatgctgtgctgccgatttctttctggagccagcccgccatgatgcgccccgacagcaaagtcgaaaaagtctacctctacaccaagccg > 4:196513‑M1/1‑13 (MQ=255) ttacGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTTCTCGAGCAAGGTGAAGATAGCGTCACCGTCGAGATGATCGCCGACGCCGTGGGCATCGGCAAAGGCACGATc < 4:184297‑M2/145‑1 (MQ=255) gCAGAAAGAACgtaagggatccatcatccccacattccaaccgtccacctgattcccgatgctgtgctcccgatttctttctggagccagcccgccatgatgcgccccgacagcaaagtcgaaaaagtctacctc < 6:344672‑M1/135‑125 (MQ=255) gCAGAAAGAACgtaagggatccatcatccccacattccaaccgtccacctgattcccgatgctgtgctcccgatttctttctggagccagcccgccatgatgcgccccgacagcaaagtcgaaaaagtctacctc > 5:344672‑M1/1‑11 (MQ=255) agaaagaaCgtaagggatccatcatccccacattccaaccgtccacctgattcccgatgctgtgctcccgatttctttctggagccagcccgccatgatgcgccccgacagcaaagtcgaaaaagtctacctctaccccaagcccgtg < 8:62106‑M1/148‑140 (MQ=255) gaaagaaCCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTTCTCGAGCAAGGTGAAGACAGCGTCACCGTCGAGATGATCGCCGACGCCGTGGGCATCGGCAAAGGc < 6:295935/139‑1 (MQ=255) gaaagaaCCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTTCTCGAGCAAGGTGAAGACAGCGTCACCGTCGAGATGATCGCCGACGCCGTGGGCATCGGCAAAGGc > 5:295935/1‑139 (MQ=255) agaaCCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTTCTCGAGCAAGGTGAAGACAGc < 3:27450/91‑1 (MQ=255) cgtaagggatccatcatccccacattccaaccgtccacctgattcccgatgctgtgctcccgatttctttctggagccagcccgccatgatgcgccccgacagcaaagtcgaaaaagtctacctctaccccaagcccgtggactttcg > 8:232172‑M1/1‑1 (MQ=255) cgtaagggatccatcatccccacattccaaccgtccacctgattcccgatgctgtgctcccgatttctttctggagccagcccgccatgatgcgccccgacagcaaagtcgaaaaagtctacctctacc < 3:170305‑M1/129‑129 (MQ=255) cgtaagggatccatcatccccacattccaaccgtccacctgattcccgatgctgtgctcccgatttctttctggagccagcccgccatgatgcgccccgacagcaaagtcgaaaaagtctacctctacc > 4:170305‑M1/1‑1 (MQ=255) | ATACGCCAACGTTTCGTTCCTCCCGCAGCGCATGGCCGTATGCATCGTGAAACACAGACATGCGTGGATGATCCGTGCAATTTCCCGCAAGTTAGGCATAATAAACCGCTTCGATTGTCATCCAGTCCTTCCCATGCAGAAAGAACCTCGTAAGGTCCGTGAGTTTCGCCGTCGCGAACAGGAAATCCTCGATACCGCGCTCAAGCTGTTTCTCGAGCAAGGTGAAGACAGCGTCACCGTCGAGATGATCGCCGACGCCGTGGGCATCGGCAAAGGCACGATCTACAAGCACT > NC_002947/2229904‑2230196 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |