New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 613309	43 (0.710)	3 (0.050)	3/256	NT	6.5%	coding (873/1896 nt)	dxs	1‑deoxyxylulose‑5‑phosphate synthase
	?	NC_002947	= 613380	45 (0.780)					coding (802/1896 nt)	dxs	1‑deoxyxylulose‑5‑phosphate synthase

GCGGCGGCCATGTCGCACAGCCACTGGCCGAACACCGCGGAGTATTTCGGGCCGCTGGCTTTCTTCGGCGCGGCGGGCTTGTCGGCCGGCTCCAGCTTGGTGATGGCGTGGTAGCCGATCGGGTCAATCTCGGCAGGGGCGAAGCCTTTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/613157‑613309 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccACCATGATCGCCACCCTGCGCAACATGCGTGACCTGAAAGGCCCGCAGTTCCTGCATGTGGTGACCAAGAAGGGCAAAGGCTTCGCCCCTGCCGAGATTGACCCGATCGGCTACCACGCCATCACCAAGCTGGAGCCGGCCGACAA  <  NC_002947/613380‑613235                                                                                                                                                                                                                                                                                                             GCGGCGGGCTTGTCGCAGAGTCACTGGCCGTACACCGGGGAGTTTTTCGGGGCGCTGGCTTTCTTCGGCGCGGCGGGCTTGTCGGCGTGCTCCAGCTTGGTGATGGCGTGGTAGCCGATCGGGTCAATCTCGGCAGGGGCGAAGCCTTT                                                                                                                                                        <  4:132417/149‑1  CGGCGGCCATGTCGCACAGCCACTGGCCGAACACCGCGGAGTATTTCGGGCCGCTGGCTTTCTTCGGCGCGGCGGGCTTGTCGGCCGGCTCCAGCTTGGTGATGGCGTGGTAGCCGATCGGGTCAATCTCGGCAGGGGCGAAGCCTTTG                                                                                                                                                       <  2:180205/149‑1     CGGCCATGTCGCACAGCCACTGGCCGAACACCGCGGAGTATTTCGGGCCGCTGGCTTTCTTCGGCGCGGCGGGCTTGTCGGCCGGCTCCAGCTTGGTGATGGCGTGGTAGCCGATCGGGTCAATCTCGGCAGGGGCGAAGCCTTTGCCC                                                                                                                                                    >  4:294969/1‑149                                             TTTCGGGCCGCTGGCTTTCTTCGGCGCGGCGGGCTTGTCGGCCGGCTCCAGCTTGGTGATGGCGTGGTAGCCGATCGGGTCAATCTCGGCAGGGGCGAAGCCTTTGCCCACCATGATCGCCACCCTGCGCAACATGCGTGACCTGAAAG                                                                                                            >  7:244353/1‑149                                                                                      CCGGCTCCAGCTTGGTGATGGCGTGGTAGCCGATCGGGTCAATCTCGGCAGGGGCGAAGCCTTTGCCCACCATGATCGCCACCCTGCGCAACATGCGTGACCTGAAAGGCCCGCAGTTCCTGCATGTGGTGACCAAGAAGGGCAAAGGC                                                                   <  8:244353/149‑1                                                                                             CAGCTTGGTGATGGCGTGGTAGCCGATCGGGTCAATCTCGGCAGGGGCGAAGCCTTTGCCCACCATGATCGCCACCCTGCGCAACATGCGTGACCTGAAAGGCCCGCAGTTCCTGCATGTGGTGACCAAGAAGGGCAAAGGCTTCGCCC                                                            <  6:209064/149‑1                                                                                                                                                       CCCACCATGATCGCCACCCTGCGCAACATGCGTGACCTGAAAGGCCCGCAGTTCCTGCATGTGGTGACCAAGAAGGGCAAAGGCTTCGCCCCTGCCGAGATTGACCCGATCGGCTACCACGCCATCACCAAGCTGGAGCCGGCCGACAA  <  6:49815/149‑1                                                                                                                                                                                                                                                                                                             GCGGCGGCCATGTCGCACAGCCACTGGCCGAACACCGCGGAGTATTTCGGGCCGCTGGCTTTCTTCGGCGCGGCGGGCTTGTCGGCCGGCTCCAGCTTGGTGATGGCGTGGTAGCCGATCGGGTCAATCTCGGCAGGGGCGAAGCCTTTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/613157‑613309 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccACCATGATCGCCACCCTGCGCAACATGCGTGACCTGAAAGGCCCGCAGTTCCTGCATGTGGTGACCAAGAAGGGCAAAGGCTTCGCCCCTGCCGAGATTGACCCGATCGGCTACCACGCCATCACCAAGCTGGAGCCGGCCGACAA  <  NC_002947/613380‑613235

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.