New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1144524	48 (0.800)	3 (0.050)	3/252	NT	6.2%	coding (162/414 nt)	PP_1004	hypothetical protein
	?	NC_002947	= 1144578	45 (0.790)					coding (108/414 nt)	PP_1004	hypothetical protein

AGTGATGTTCCAGAAAGGTCAGCATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGCCATGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1144376‑1144524 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgacCACCGAGTTCATCCTGCTGGCCGCCTGGGCCGCCACACGCAGTTCACCGCGCCTGTCGGCATGGCTGGAGAACCACCGGCTGTTCGGGCCAATTCTGCATAACTGGCGCAACGGCAAGGTGATCCAGCGCCGGGCCAAGGTCAGCG  <  NC_002947/1144578‑1144433                                                                                                                                                                                                                                                                                                         AGTGATGTTCCAGAAAGGTCAGCATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGCCATGCCGcc                                                                                                                                                    >  6:220750/1‑147                                                     GGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGCCATGCCGACCACCGAGTTCATCCTGCTGGCCGCCTGGGCCGCCACACGCAGTTCACCGCGC                                                                                                >  4:20316/1‑149                                                               ACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGCCATGCCGACCACCGAGTTCATCCTGCTGGCCGCCTGGGCCGCCACACGCAGTTCACCGCGCCTGTCGGC                                                                                        <  4:328837/147‑1                                                                 CTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGCCATGCCGACCACCGAGTTCATCCTGCTGGCCGCCTGGGCCGCCACACGCAGTTCACCGCGCCTGTCGGCATGG                                                                                    <  3:20316/149‑1                                                                                                                                                 CCGACCACCGAGTTCATCCTGCTGGCCGCCTGGGCCGCCACACGCAGTTCACCGCGCCTGTCGGCATGGCTGGAGAACCACCGGCTGTTCGGGCCAATTCTGCATAACTGGCGCAACGGCAAGGTGATCCAGCGCCGGGCCAAGGTCAG    >  5:281588/1‑149                                                                                                                                                   GACCACCGAGTTCATCCTGCTGGCCGCCTGGGCCGCCACACGCAGTTCACCGCGCCTGTCGGCATGGCTGGAGAACCACCGGCTGTTCGGGCCAATTCTGCATAACTGGCGCAACGGCAAGGTGATCCAGCGCCGGGCCAAGGTCAGCG  <  8:300346/149‑1                                                                                                                                                                                                                                                                                                         AGTGATGTTCCAGAAAGGTCAGCATCAGGCCCGCGCACAGCAGCATGCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGCCATGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1144376‑1144524 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgacCACCGAGTTCATCCTGCTGGCCGCCTGGGCCGCCACACGCAGTTCACCGCGCCTGTCGGCATGGCTGGAGAACCACCGGCTGTTCGGGCCAATTCTGCATAACTGGCGCAACGGCAAGGTGATCCAGCGCCGGGCCAAGGTCAGCG  <  NC_002947/1144578‑1144433

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.