New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1170744 =	41 (0.680)	6 (0.110)	6/244	NT	13.7%	intergenic (‑335/+98)	leuA/PP_1026	2‑isopropylmalate synthase/M23/M37 family peptidase
	?	NC_002947	1170828 =	38 (0.690)					intergenic (‑419/+14)	leuA/PP_1026	2‑isopropylmalate synthase/M23/M37 family peptidase

CGTCAGCCTGAACGATGCGCGGGTGGACCCGGCGATTTTCATTGGCGCGTTCCAGCCCTGAAACTGCGGCGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACAGCGAAGCCTTCAGACACAGCACAATACTTGTGGGAGCGGGCATGCCCGCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1170902‑1170744 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccgcgaagCAGGCGCCGCAGTTTCAGGGCTGGAACGCGCCAATGAAAATCGCCGGGTCCACCCGCGCATCGTTCAGGCTGACGTTCCAGTGCATGTGCGGCCCGGTTGCCCGCCCGGTCGAGCCCACGCGCCCGACCACCTCGCCACGACG  >  NC_002947/1170828‑1170970                                                                                                                                                                                                                                                                                                                CGTCAGCCTGAACGATGCGCGGGGGGACCCGGCGATTTTCATTGGCGCGTTCCAGCCCTGAAACTGCGGCGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACAGCGAAGCCTTCAGACACAGCACAATACTTGTGGGAGCGGGCAT                                                                                                                                                           <  8:27604/149‑1     AGCCTGAACGATGCGCGGGTGGACCCGGCGATTTTCATTGGCGCGTTCCAGCCCTGAAACTGCGGCGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACAGCGAAGCCTTCAGACACAGCACAATACTTGTGGGAGCGGGCATGCCC                                                                                                                                                       <  6:193237/149‑1                                                                                      ACGCCCGCTCCCACAGGTACAGCGAAGCCTTCAGACACAGCACAATACTTGTGGGAGCGGGCATGCCCGCGAAGCAGGCGCCGCAGTTTCAGGGCTGGAACGCGCCAATGAAAATCGCCGGGTCCACCCGCGCATCGTTCA                                                                              >  7:216513/1‑141                                                                                      ACGCCCGCTCCCACAGGTACAGCGAAGCCTTCAGACACAGCACAATACTTGTGGGAGCGGGCATGCCCGCGAAGCAGGCGCCGCAGTTTCAGGGCTGGAACGCGCCAATGAAAATCGCCGGGTCCACCCGCGCATCGTTCA                                                                              <  8:216513/141‑1                                                                                          CCGCTCCCACAGGTACAGCGAAGCCTTCAGACACAGCACAATACTTGTGGGAGCGGGCATGCCCGCGAAGCAGGCGCCGCAGTTTCAGGGCTGGAACGCGCCAATGAAAATCGCCGGGTCCACCCGCGCATCGTTCAGGCTGACGTTC                                                                   >  1:345957/1‑148                                                                                             CTCCCACAGGTACAGCGAAGCCTTCAGACACAGCACAATACTTGTGGGAGCGGGCATGCCCGCGAAGCAGGCGCCGCAGTTTCAGGGCTGGAACGCGCCAATGAAAATCGCCGGGTCCACCCGCGCATCGTTCAGGCTGACGTTCCAGT                                                               <  2:345957/149‑1                                                                                                        ACAGCGAAGCCTTCAGACACAGCACAATACTTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGCCGCAGTTTCAGGGCTGGAACGCGCCAATGAAAATCGCCGGGTCCACCCGCGCATCGTTCAGGCTGACGTTCCAGTGCATGTGCGGC                                                    >  4:162465/1‑149                                                                                                              AAGCCTTCAGACACAGCACAATACTTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGCCGCAGTTTCAGGGCTGGAACGCGCCAATGAAAATCGCCGGGTCCACCCGCGCATCGTTCAGGCTGACGTTCCAGTGCATGTGCGGCCCGGTT                                              <  3:162465/149‑1                                                                                                                                                 GGCATGCCCGCGAAGCAGGCGCCGCAGTTTCAGGGCTGGAACGCGCCAATGAAAATCGCCGGGTCCACCCGCGCATCGTTCAGGCTGACGTTCCAGTGCATGTGCGGCCCGGTTGCCCGCCCGGTCGAGCCCACGCGCCCGAC                 <  5:206931/143‑1                                                                                                                                                 GGCATGCCCGCGAAGCAGGCGCCGCAGTTTCAGGGCTGGAACGCGCCAATGAAAATCGCCGGGTCCACCCGCGCATCGTTCAGGCTGACGTTCCAGTGCATGTGCGGCCCGGTTGCCCGCCCGGTCGAGCCCACGCGCCCGAC                 >  6:206931/1‑143                                                                                                                                                       CCCGCGAAGCAGGCGCCGCAGTTTCAGGGCTGGAACGCGCCAATGAAAATCGCCGGGTCCACCCGCGCATCGTTCAGGCTGACGTTCCAGTGCATGTGCGGCCCGGTTGCCCGCCCGGTCGAGCCCACGCGCCCGACCACCTCGCCACG     >  5:229045/1‑149                                                                                                                                                         CGCGAAGCAGGCGCCGCAGTTTCAGGGCTGGAACGCGCCAATGATAATCGCCGGGTCCACCCGCGCATCGTTCAGGCTGACGTTCCAGTGCATGTGCGGCCCGGTTGCACGACCGGTCGAGCACTCGCGCCCGACGACATCGCCAGGAC   >  8:291299/1‑149                                                                                                                                                         CGCGAAGCAGGCGCCGCAGTTTCAGGGCTGGAACGCGCCAATGAAAATCGCCGGGTCCACCCGCGCATCGTTCAGGCTGACGTTCCAGTGCATGTGCGGCCCGGTTGCCCGCCCGGTCGAGCCCACGCGCCCGACCACCTCGCCACGAC   <  7:219937/149‑1                                                                                                                                                          GCGAAGCAGGCGCCGCAGTTTCAGGGCTGGAACGCGCCAATGAAAATCGCCGGGTCCACCCGCGCATCGTTCAGGCTGACGTTCCAGTGCATGTGCGGCCCGGTTGCCCGCCCGGTCGAGCCCACGCGCCCGACCACCTCGCCACGACG  <  6:193147/149‑1                                                                                                                                                                                                                                                                                                                CGTCAGCCTGAACGATGCGCGGGTGGACCCGGCGATTTTCATTGGCGCGTTCCAGCCCTGAAACTGCGGCGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACAGCGAAGCCTTCAGACACAGCACAATACTTGTGGGAGCGGGCATGCCCGCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1170902‑1170744 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccgcgaagCAGGCGCCGCAGTTTCAGGGCTGGAACGCGCCAATGAAAATCGCCGGGTCCACCCGCGCATCGTTCAGGCTGACGTTCCAGTGCATGTGCGGCCCGGTTGCCCGCCCGGTCGAGCCCACGCGCCCGACCACCTCGCCACGACG  >  NC_002947/1170828‑1170970

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.