| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1855815 | 42 (0.700) | 3 (0.050) | 3/256 | NT | 6.6% | coding (827/1341 nt) | PP_1659 | hypothetical protein |
| ? | NC_002947 | = 1855848 | 44 (0.760) | coding (860/1341 nt) | PP_1659 | hypothetical protein | |||||
CCACGCCGTCGACGCGCTGGTCTACACCCCCGGCAACGCCGACCCGAACAAGGGGGCGGTGATCCCCGAGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1855666‑1855815‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtcTTTTCCGGCACGTTGCGCACGTGCTCGAACGTCGACCATACCCACTGAGGTGCGCCTTCGGTCTTGTGCACGATGTGCAGGCCTACCAGCCCGACCTTCTGCGCATTGCACGACTCGGGGATCACCGCCCCCTTGTTCGGGTCGGCG < NC_002947/1855848‑1855702 CCACGCCGTCGACGCGCTGGTCTACACCCCCGGCAACGCCGACCCGAACAAGGGGGCGGTGATCCCCGAGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGT > 2:226785/1‑149CCACGCCGTCGACGCGCTGGTCTACACCCCCGGCAACGCCGACCCGAACAAGGGGGCGGTGATCCCCGAGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGT > 7:341523/1‑149 CCGAACAAGGGGGCGGTGATCCCCGAGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCTTTTCCGGCACGTTGCGCACGTGCTCGAACGTCGACCATACC < 1:221818/149‑1 GAGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCTTTTCCGGCACGTTGCGCACGTGCTCGAACGTCGACCATAC > 3:13597/1‑124 GAGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCTTTTCCGGCACGTTGCGCACGTGCTCGAACGTCGACCATAC < 4:13597/124‑1 TCTTTTCCGGCACGTTGCGCACGTGCTCGAACGTCGACCATACCCACTGAGGTGCGCCTTCGGTCTTGTGCACGATGTGCAGGCCTACCAGCCCGACCTTCTGCGCATTGCACGACTCGGGGATCACCGCCCCCTTGTTCGGGTCGGCG > 1:214943/1‑149 CCACGCCGTCGACGCGCTGGTCTACACCCCCGGCAACGCCGACCCGAACAAGGGGGCGGTGATCCCCGAGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1855666‑1855815‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtcTTTTCCGGCACGTTGCGCACGTGCTCGAACGTCGACCATACCCACTGAGGTGCGCCTTCGGTCTTGTGCACGATGTGCAGGCCTACCAGCCCGACCTTCTGCGCATTGCACGACTCGGGGATCACCGCCCCCTTGTTCGGGTCGGCG < NC_002947/1855848‑1855702 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |