New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1936355 | 48 (0.800) | 3 (0.050) | 3/258 | NT | 5.7% | coding (657/1149 nt) | PP_1736 | hypothetical protein |
? | NC_002947 | = 1936390 | 53 (0.910) | coding (692/1149 nt) | PP_1736 | hypothetical protein |
GCTGCGCCACCGGCGTATCGGCGTACCCGCACCGTTGACCATCGACCACCTGCTGGCCAGTGCGGCGATCCCGCTGCTGTTCGCCCCGGTGCAACTGGGCGGCGAGTATTACGGCGACGGTGCAGTGCGCCAGTCGGCGCCGATCAGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1936205‑1936355 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgACCACCAGCACCCGGCTGGCGCCCAGGTGCAAGGCCGGGCTGA < NC_002947/1936390‑1936348 GCTGCGCCACCGGCGTATCGGCGTACCCGCACCGTTGACCATCGACCACCTGCTGGCCAGTGCGGCGATCCCGCTGCTGTTCGCCCCGGTGCAACTGGGCGGCGAGTATTACGGCGACGGTGCAGTGCGCCAGTCGGCGCCGATCAGCC > 2:303009/1‑149 CTGCGCCACCGGCGTATCGGCGTACCCGCACCGTTGACCATCGACCACCTGCTGGCCAGTGCGGCGATCCCGCTGCTGTTCGCCCCGGTGCAACTGGGCGGCGAGTATTACGGCGACGGTGCAGTGCGCCAGTCGGCGCCGATCAGCCC > 5:302221/1‑149 CCACCTGCTGGCCAGTGCGGCGATCCCGCTGCTGTTCGCCCCGGTGCAACTGGGCGGCGAGTATTACGGCGACGGTGCAGTGCGCCAGTCGGCGCCGATCAGCCCGACCACCAGCACCCGGCTGGCGCCCAGGTGCAAGGCCGGGCTGA < 6:333756/149‑1 AACTGGGCGGCGAGTATTACGGCGACGGTGCAGTGCGCCAGTCGGCGCCGATCAGCCCGACCACCAGCACCCGGCTGGCGCCCAGGTGCAAGGCCGGGC > 5:93101/1‑99 AACTGGGCGGCGAGTATTACGGCGACGGTGCAGTGCGCCAGTCGGCGCCGATCAGCCCGACCACCAGCACCCGGCTGGCGCCCAGGTGCAAGGCCGGGC < 6:93101/99‑1 GCTGCGCCACCGGCGTATCGGCGTACCCGCACCGTTGACCATCGACCACCTGCTGGCCAGTGCGGCGATCCCGCTGCTGTTCGCCCCGGTGCAACTGGGCGGCGAGTATTACGGCGACGGTGCAGTGCGCCAGTCGGCGCCGATCAGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1936205‑1936355 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgACCACCAGCACCCGGCTGGCGCCCAGGTGCAAGGCCGGGCTGA < NC_002947/1936390‑1936348 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |