New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2110535 | 55 (0.910) | 4 (0.070) | 4/250 | NT | 6.9% | coding (3751/4899 nt) | PP_1882 | membrane protein |
? | NC_002947 | = 2110619 | 56 (0.990) | coding (3667/4899 nt) | PP_1882 | membrane protein |
TTGCGCACCAGTGCCTTTCTGCTGCTGGCCCAGCGCCTGCTCGTCATGATGCAGGTACAGGGTTTGCAGGCTGTCACGCACGGCCATGCGCAAACGCTGGCCGTCATGCAGCAGCAGCGTGCGCTCGCCGGCCTCGGGCCTGCTGACCAGCAAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2110380‑2110535 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcaagccCGGCCAATTCGCTACGACAGCCAGAACCGGTTGCTGGGCCTTAACGACAGCGGCGCCCCGGACACCTATGGCTACGACGCAGGCGGCTTGCTGGTCAGCAGGCCCGAGGCCGGCGAGCGCACGCTGCTGCTGCATGACGGCCAGCGT < NC_002947/2110619‑2110473 TTGCGCACCAGTGCCTTTCTGCTGCTGGCCCAGCGCCTGCTCGTCATGATGCAGGTACAGGGTTTGCAGGCTGTCACGCACGGCCATGCGCAAACGCTGGCCGTCATGCAGCAGCAGCGTGCGCTCGCCGGCCTCGGGCCTGCTGACCA < 4:30818/149‑1 GCGCACCAGTGCCTTTCTGCTGCTGGCCCAGCGCCTGCTCGTCATGATGCAGGTACAGGGTTTGCAGGCTGTCACGCACGGCCATGCGCAAACGCTGGCCGTCATGCAGCAGCAGCGTGCGCTCGCCGGCCTCGGGCCTGCTGACCAG > 5:144499/1‑148 GCACCAGTGCCTTTCTGCTGCTGGCCCAGCGCCTGCTCGTCATGATGCAGGTACAGGGTTTGCAGGCTGTCACGCACGGCCATGCGCAAACGCTGGCCGTCATGCAGCAGCAGCGTGCGCTCGCCGGCCTCGGGCCTGCTGACCAGC > 8:93962/1‑147 TGCTGGCCCAGCGCCTGCTCGTCATGATGCAGGTACAGGGTTTGCAGGCTGTCACGCACGGCCATGCGCAAACGCTGGCCGTCATGCAGCAGCAGCGTGCGCTCGCCGGCCTCGGGCCTGCTGACCAG < 3:157256/128‑1 TGCTGGCCCAGCGCCTGCTCGTCATGATGCAGGTACAGGGTTTGCAGGCTGTCACGCACGGCCATGCGCAAACGCTGGCCGTCATGCAGCAGCAGCGTGCGCTCGCCGGCCTCGGGCCTGCTGACCAG > 4:157256/1‑128 TGCAGGCTGTCACGCACGGCCATGCGCAAACGCTGGCCGTCATGCAGCAGCAGCGTGCGCTCGCCGGCCTCGGGCCTGCTGACCAGCAAGCCCGGCCAATTCGCTACGACAGCCAGAACCGGTTGCTGGGCCTTAACGACAGCGGCGCC > 7:91658/1‑149 CCGTCATGCAGCAGCAGCGTGCGCTCGCCGGCCTCGGGCCTGCTGACCAGCAAGCCCGGCCAATTCGCTACGACAGCCAGAACCGGTTGCTGGGCCTTAACGACAGCGGCGCCCCGGACACCTATGGCTACGACGCAGGCGGCTTGCTG < 8:91658/149‑1 TCATGCAGCAGCAGCGTGCGCTCGCCGGCCTCGGGCCTGCTGACCAGCAAGCCCGGCCAATTCGCTACGACAGCCAGAACCGGTTGCTGGGCCTTAACGACAGCGGCGCCCCGGACACCTATGGCTACGACGCAGGCGGCTTGCTGGTC < 6:144499/149‑1 CAGCAGCAGCGCGCGCTCGCCGGCCTCTGGCCGGCGTACCAGCAAGCCCGGCCAATTCGCTACGACAGGCACAACCGGTTGCTGGGCCTTAACGACAGCGGCGCCCCGGACACCTATGGCTACGACGCAGGCGGCTTGCTGGTCAGCA < 3:235910/148‑1 AAGCCCGGCCAATTCGCTACGACAGCCAGAACCGGTTGCTGGGCCTTAACGACAGCGGCGCCCCGGACACCTATGGCTACGACGCAGGCGGCTTGCTGGTCAGCAGGCCCGAGGCCGGCGAGCGCACGCTGCTGCTGCATGACGGCCAG < 7:236169/149‑1 AGCCCGGCCAATTCGCTACGACAGCCAGCACCGGTTGCTGGGCCTTAACGACAGCGGCTCCCCGGACACCTCTGGCTACGACGCTGGCGGCTGGCTGGTCAGCATGCCCGAGGCCGGCGAGCGCACGCTGCTGCTGCATGACGGCCAGC < 7:152352/149‑1 GCCCGGGCTATTCGCTACGACAGCCAGAACCGGTTGCTGGGCCTTAACGACAGCGGCGCCCCGGACACCTATGGCTACGACGCAGGCGGCTTGCTGGTCAGCAGGCCCGAGGCCGGCGAGCGCACGCTGCTGCTGC < 8:182778/136‑1 GCCCGGCCAATTCGCTACGACAGCCAGAACCCGTTGCTGGGCCTTAACGACAGCGGCGCCCCGGACACCTATGGCTACGACGCAGGCGGCTTGCTGGTCAGCAGGCCCGAGGCCGGCGAGCGCACGCTGCTGCTGC > 7:182778/1‑136 GCCCCGCCAATTCGCTACGACAGCCAGAACCGGTTGCTGGGCCTTAACGACAGCGGCGCCCCGGACACCTATGGCTACGACGCAGGCGGCTTGCTGGTCAGCAGGCCCGAGGCCGGCGAGCGCACGCTGCTGCTGCATGACGGCCAGCG > 7:93962/1‑149 CCGGCCAATTCGCTACGACAGCCAGAACCGGTTGCTGGGCCTTAACGACAGCGGCGCCCCGGACACCTATGGCTACGACGCAGGCGGCTTGCTGGTCAGCAGGCCCGAGGCCGGCGAGCGCACGCTGCTGCTGCATGACGGCCAtgcg > 7:311513/1‑144 TTGCGCACCAGTGCCTTTCTGCTGCTGGCCCAGCGCCTGCTCGTCATGATGCAGGTACAGGGTTTGCAGGCTGTCACGCACGGCCATGCGCAAACGCTGGCCGTCATGCAGCAGCAGCGTGCGCTCGCCGGCCTCGGGCCTGCTGACCAGCAAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2110380‑2110535 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcaagccCGGCCAATTCGCTACGACAGCCAGAACCGGTTGCTGGGCCTTAACGACAGCGGCGCCCCGGACACCTATGGCTACGACGCAGGCGGCTTGCTGGTCAGCAGGCCCGAGGCCGGCGAGCGCACGCTGCTGCTGCATGACGGCCAGCGT < NC_002947/2110619‑2110473 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |