New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 211053555 (0.910)4 (0.070) 4/250 NT 6.9% coding (3751/4899 nt) PP_1882 membrane protein
?NC_002947 = 2110619 56 (0.990)coding (3667/4899 nt) PP_1882 membrane protein

TTGCGCACCAGTGCCTTTCTGCTGCTGGCCCAGCGCCTGCTCGTCATGATGCAGGTACAGGGTTTGCAGGCTGTCACGCACGGCCATGCGCAAACGCTGGCCGTCATGCAGCAGCAGCGTGCGCTCGCCGGCCTCGGGCCTGCTGACCAGCAAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2110380‑2110535
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcaagccCGGCCAATTCGCTACGACAGCCAGAACCGGTTGCTGGGCCTTAACGACAGCGGCGCCCCGGACACCTATGGCTACGACGCAGGCGGCTTGCTGGTCAGCAGGCCCGAGGCCGGCGAGCGCACGCTGCTGCTGCATGACGGCCAGCGT  <  NC_002947/2110619‑2110473
                                                                                                                                                                                                                                                                                                               
TTGCGCACCAGTGCCTTTCTGCTGCTGGCCCAGCGCCTGCTCGTCATGATGCAGGTACAGGGTTTGCAGGCTGTCACGCACGGCCATGCGCAAACGCTGGCCGTCATGCAGCAGCAGCGTGCGCTCGCCGGCCTCGGGCCTGCTGACCA                                                                                                                                                            <  4:30818/149‑1
  GCGCACCAGTGCCTTTCTGCTGCTGGCCCAGCGCCTGCTCGTCATGATGCAGGTACAGGGTTTGCAGGCTGTCACGCACGGCCATGCGCAAACGCTGGCCGTCATGCAGCAGCAGCGTGCGCTCGCCGGCCTCGGGCCTGCTGACCAG                                                                                                                                                           >  5:144499/1‑148
    GCACCAGTGCCTTTCTGCTGCTGGCCCAGCGCCTGCTCGTCATGATGCAGGTACAGGGTTTGCAGGCTGTCACGCACGGCCATGCGCAAACGCTGGCCGTCATGCAGCAGCAGCGTGCGCTCGCCGGCCTCGGGCCTGCTGACCAGC                                                                                                                                                          >  8:93962/1‑147
                      TGCTGGCCCAGCGCCTGCTCGTCATGATGCAGGTACAGGGTTTGCAGGCTGTCACGCACGGCCATGCGCAAACGCTGGCCGTCATGCAGCAGCAGCGTGCGCTCGCCGGCCTCGGGCCTGCTGACCAG                                                                                                                                                           <  3:157256/128‑1
                      TGCTGGCCCAGCGCCTGCTCGTCATGATGCAGGTACAGGGTTTGCAGGCTGTCACGCACGGCCATGCGCAAACGCTGGCCGTCATGCAGCAGCAGCGTGCGCTCGCCGGCCTCGGGCCTGCTGACCAG                                                                                                                                                           >  4:157256/1‑128
                                                                TGCAGGCTGTCACGCACGGCCATGCGCAAACGCTGGCCGTCATGCAGCAGCAGCGTGCGCTCGCCGGCCTCGGGCCTGCTGACCAGCAAGCCCGGCCAATTCGCTACGACAGCCAGAACCGGTTGCTGGGCCTTAACGACAGCGGCGCC                                                                                            >  7:91658/1‑149
                                                                                                    CCGTCATGCAGCAGCAGCGTGCGCTCGCCGGCCTCGGGCCTGCTGACCAGCAAGCCCGGCCAATTCGCTACGACAGCCAGAACCGGTTGCTGGGCCTTAACGACAGCGGCGCCCCGGACACCTATGGCTACGACGCAGGCGGCTTGCTG                                                        <  8:91658/149‑1
                                                                                                       TCATGCAGCAGCAGCGTGCGCTCGCCGGCCTCGGGCCTGCTGACCAGCAAGCCCGGCCAATTCGCTACGACAGCCAGAACCGGTTGCTGGGCCTTAACGACAGCGGCGCCCCGGACACCTATGGCTACGACGCAGGCGGCTTGCTGGTC                                                     <  6:144499/149‑1
                                                                                                            CAGCAGCAGCGCGCGCTCGCCGGCCTCTGGCCGGCGTACCAGCAAGCCCGGCCAATTCGCTACGACAGGCACAACCGGTTGCTGGGCCTTAACGACAGCGGCGCCCCGGACACCTATGGCTACGACGCAGGCGGCTTGCTGGTCAGCA                                                 <  3:235910/148‑1
                                                                                                                                                       AAGCCCGGCCAATTCGCTACGACAGCCAGAACCGGTTGCTGGGCCTTAACGACAGCGGCGCCCCGGACACCTATGGCTACGACGCAGGCGGCTTGCTGGTCAGCAGGCCCGAGGCCGGCGAGCGCACGCTGCTGCTGCATGACGGCCAG     <  7:236169/149‑1
                                                                                                                                                        AGCCCGGCCAATTCGCTACGACAGCCAGCACCGGTTGCTGGGCCTTAACGACAGCGGCTCCCCGGACACCTCTGGCTACGACGCTGGCGGCTGGCTGGTCAGCATGCCCGAGGCCGGCGAGCGCACGCTGCTGCTGCATGACGGCCAGC    <  7:152352/149‑1
                                                                                                                                                         GCCCGGGCTATTCGCTACGACAGCCAGAACCGGTTGCTGGGCCTTAACGACAGCGGCGCCCCGGACACCTATGGCTACGACGCAGGCGGCTTGCTGGTCAGCAGGCCCGAGGCCGGCGAGCGCACGCTGCTGCTGC                <  8:182778/136‑1
                                                                                                                                                         GCCCGGCCAATTCGCTACGACAGCCAGAACCCGTTGCTGGGCCTTAACGACAGCGGCGCCCCGGACACCTATGGCTACGACGCAGGCGGCTTGCTGGTCAGCAGGCCCGAGGCCGGCGAGCGCACGCTGCTGCTGC                >  7:182778/1‑136
                                                                                                                                                         GCCCCGCCAATTCGCTACGACAGCCAGAACCGGTTGCTGGGCCTTAACGACAGCGGCGCCCCGGACACCTATGGCTACGACGCAGGCGGCTTGCTGGTCAGCAGGCCCGAGGCCGGCGAGCGCACGCTGCTGCTGCATGACGGCCAGCG   >  7:93962/1‑149
                                                                                                                                                           CCGGCCAATTCGCTACGACAGCCAGAACCGGTTGCTGGGCCTTAACGACAGCGGCGCCCCGGACACCTATGGCTACGACGCAGGCGGCTTGCTGGTCAGCAGGCCCGAGGCCGGCGAGCGCACGCTGCTGCTGCATGACGGCCAtgcg  >  7:311513/1‑144
                                                                                                                                                                                                                                                                                                               
TTGCGCACCAGTGCCTTTCTGCTGCTGGCCCAGCGCCTGCTCGTCATGATGCAGGTACAGGGTTTGCAGGCTGTCACGCACGGCCATGCGCAAACGCTGGCCGTCATGCAGCAGCAGCGTGCGCTCGCCGGCCTCGGGCCTGCTGACCAGCAAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2110380‑2110535
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcaagccCGGCCAATTCGCTACGACAGCCAGAACCGGTTGCTGGGCCTTAACGACAGCGGCGCCCCGGACACCTATGGCTACGACGCAGGCGGCTTGCTGGTCAGCAGGCCCGAGGCCGGCGAGCGCACGCTGCTGCTGCATGACGGCCAGCGT  <  NC_002947/2110619‑2110473

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.