New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2143021 =	69 (1.150)	4 (0.070)	4/256	NT	5.7%	coding (472/675 nt)	PP_1898	MotA/TolQ/ExbB proton channel family protein
	?	NC_002947	2143071 =	65 (1.120)					coding (522/675 nt)	PP_1898	MotA/TolQ/ExbB proton channel family protein

CACCAGCTTGATCGCCTCCTGCTCCATGCCGATCACCAGTTCATCGATGCGGCGCAGCAGGAAACGGTGGAAGAACACTGCCGGAATACCGACCATCAGGCCAGCCGCAGTGGTGACCAGGGCCTTGGAGATACCACTGGCCAGCACGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2143173‑2143021 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGCGCCGCATCGATGAACTGGTGATCGGCATGGAGCAGGAGGCGATCAAGCTGGTGGAAGTGATCCAGGGTGACCGTGAAGTGGAAGTGGCCGGAGG  >  NC_002947/2143071‑2143214                                                                                                                                                                                                                                                                                                           CACCAGCTTGATCGCCTCCTGCTCCATGCCGATCACCAGTTCATCGATGCGGCGCAGCAGGAAACGGTGGAAGAACACTGCCGGAATACCGACCATCAGGCCAGCCGCAGTGGTGACCAGGGCCTTGGAGATACCACTGGCCAGCACGG                                                                                                                                                      >  5:163333/1‑149                                                                                                      CAGCCGCAGTGGTGACCAGGGCCTTGGAGATACCACTGGCCAGCACGGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGCGCCGCATCGATGAACTGGTGATCGGCATGGAGCAGGAGGCGATCAAG                                                 >  1:131798/1‑149                                                                                                       AGCCGCAGTGGTGACCAGGGCCTTGGAGATACCACTGGCCAGCACGGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGCGCCGCATCGATGAACTGGTGATCGGCATGGAGCAGGAGGCGA                                                      <  3:107630/143‑1                                                                                                       AGCCGCAGTGGTGACCAGGGCCTTGGAGATACCACTGGCCAGCACGGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGCGCCGCATCGATGAACTGGTGATCGGCATGGAGCAGGAGGCGA                                                      >  4:107630/1‑143                                                                                                                                    TACCACTGGCCAGCACGGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGCGCCGCATCGATGAACTGGTGATCGGCATGGAGCAGGAGGCGATCAAGCTGGTGGAAGTGATCCAGGGTGACCGTGAA                   <  2:131798/149‑1                                                                                                                                                      CGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGCGCCGCATCGATGAACTGGTGATCGGCATGGAGCAGGAGGCGATCAAGCTGGTGGAAGTGATCCAGGGTGAGCGTGAAGTGGAAGTGGCCGGAGG  <  2:313200/148‑1                                                                                                                                                      CGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGCGCCGCATCGATGAACTGGTGATCGGCATGGAGCAGGAGGCGATCAAGCTGGTGGAAGTGATCCAGGGTGACCGTGAAGTGGAAGTGGCCGGAGG  <  2:45565/148‑1                                                                                                                                                      CGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGCGCCGCATCGATGAACTGGTGATCGGCATGGAGCAGGAGGCGATCAAGCTGGTGGAAGTGATCCAGGGTGACCGTGAAGTGGAAGTGGCCGGAG   <  1:98059/147‑1                                                                                                                                                      CGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCATCCACCGTTTCCTGCTGCGCCGCATCGATGAACGGGTGATCGGCATGGAGCAGGAGGCGAGCAAGCTGGTGGAAGTGATCCAGGGTGACCGTGAAGTGGAAGTGGCCGGAG   <  3:117181/147‑1                                                                                                                                                                                                                                                                                                           CACCAGCTTGATCGCCTCCTGCTCCATGCCGATCACCAGTTCATCGATGCGGCGCAGCAGGAAACGGTGGAAGAACACTGCCGGAATACCGACCATCAGGCCAGCCGCAGTGGTGACCAGGGCCTTGGAGATACCACTGGCCAGCACGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2143173‑2143021 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGCGCCGCATCGATGAACTGGTGATCGGCATGGAGCAGGAGGCGATCAAGCTGGTGGAAGTGATCCAGGGTGACCGTGAAGTGGAAGTGGCCGGAGG  >  NC_002947/2143071‑2143214

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.