New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2143021 =69 (1.150)4 (0.070) 4/256 NT 5.7% coding (472/675 nt) PP_1898 MotA/TolQ/ExbB proton channel family protein
?NC_002947 2143071 = 65 (1.120)coding (522/675 nt) PP_1898 MotA/TolQ/ExbB proton channel family protein

GCGCGTCATCCATGAACTGGAGCGCTACATCAGCACCCTCGGCACCATCGCCGCCATGGCGCCTCTGCTGGGTCTGCTGGGCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGCGCCGCATCGATGAACTGGTGATCGGCATGGAGCAGGAGGCGA  >  NC_002947/2142879‑2143162
                                                                                                                                                |                                                                                                                                             
gcgcgTCATCCATGAACTGGAGCGCTACATCAGCACCCTCGGCACCATCGCCGCCATGGCGCCTCTGCTGGGTCTGCTGGGCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGccgccg                                                                                                                                         >  5:74539/1‑149 (MQ=255)
cctccggccacttccacttcacggtcaccctggatcacttccaccagcttgatcgcctcctgctccatgccgatcaccagttcatcgatgcggcgcagcaggaaacggtggaagaacactgccggaataccgaccatcaggccagccg                                                                                                                                            <  2:45565‑M1/4‑1 (MQ=255)
cctccggccacttccacttcacgctcaccctggatcacttccaccagcttgatcgcctcctgctccatgccgatcaccagttcatcgatgcggcgcagcaggaaacggtggaagaacactgccggaataccgaccatcaggccagccg                                                                                                                                            <  2:313200‑M1/4‑1 (MQ=255)
 ctccggccacttccacttcacggtcaccctggatcacttccaccagcttgctcgcctcctgctccatgccgatcacccgttcatcgatgcggcgcagcaggaaacggtggatgaacactgccggaataccgaccatcaggccagccg                                                                                                                                            <  3:117181‑M1/4‑1 (MQ=255)
 ctccggccacttccacttcacggtcaccctggatcacttccaccagcttgatcgcctcctgctccatgccgatcaccagttcatcgatgcggcgcagcaggaaacggtggaagaacactgccggaataccgaccatcaggccagccg                                                                                                                                            <  1:98059‑M1/4‑1 (MQ=255)
    gTCATCCATGAACTGGAGCGCTACATCAGCACCCTCGGCACCATCGCCGCCATGGCGCCTCTGCTGGGTCTGCTGGGCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCt                                                                                                                                     >  6:163333/1‑149 (MQ=255)
     tCATCCATGAACTCGAGCGCTACATCAGCACCCTCGGCACCATCGCCGCCATGGCGCCTCTGCTGGGTCTGCTGGGCACCGAGCTAGGCAAGATAGACATATTCA‑‑GCGACTTCATGGTCGAGCAGATTACAGCCAACTCCTCCGTGATg                                                                                                                                    >  8:291431/1‑149 (MQ=255)
         ccATGAACTGGAGCGCTACATCAGCACCCTCGGCACCATCGCCGCCATGGCGCCTCTGCTGGGTCTGCTGGGCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGc                                                                                                                                  >  4:225645/1‑147 (MQ=255)
                cTGGAGCGCTACATCAGCACCCTCGGCACCATCGCCGCCATGGCGCCTCTGCTGGGTCTGCTGGGCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGt                                                                                                                           >  7:304389/1‑147 (MQ=255)
                cTGGAGCGCTACATCAGCACCCTCGGCACCATCGCCGCCATGGCGCCTCTGCTGGGTCTGCTGGGCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGt                                                                                                                           <  8:304389/147‑1 (MQ=255)
                 ttcacggtcaccctggatcacttccaccagcttgatcgcctcctgctccatgccgatcaccagttcatcgatgcggcgcagcaggaaacggtggaagaacactgccggaataccgaccatcaggccaGCCGCCGTGCTGGCCAGTGGTa                                                                                                                          <  2:131798‑M1/22‑1 (MQ=255)
                   gAGCGCTACATCAGCACCCTCGGCACCATCGCCGCCATGGCGCCTCTGCTGGGTCTGCTGGGCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTAtct                                                                                                                       >  1:58878/1‑148 (MQ=255)
                       gcTACATCAGCACCCTCGGCACCATCGCCGCCATGGCGCCTCTGCTGGGTCTGCTGGGCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAg                                                                                                                  >  8:153360/1‑149 (MQ=255)
                           cATCAGCACCCTCGGCACCATCGCCGCCATGGCGCCTCTGCTGGGTCTGCTGGGCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGccc                                                                                                              >  7:269609/1‑149 (MQ=255)
                             tCAGCACCCTCGGCACCATCGCCGCCATGGCGCCTCTGCTGGGTCTGCTGGGCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTg                                                                                                            <  8:269609/149‑1 (MQ=255)
                               aGCAACCTCGGCACCATCGCCGCCATGGCGCCTCTGCTGGGACTGCTGGGCACCGTGCTAGGCATTATCGACATATTCA‑‑CCGAATTCATGGGCTCGCAGATGACCGCCAACGACGCCGTCCTGGCCAGAGGTATCTCCAAGGCCCTAGt                                                                                                          >  6:243449/1‑149 (MQ=255)
                                gCACCCTCGGCACCATCGCCGCCATGGCGCCTCTGCTGGGTCTGCTGGGCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTg                                                                                                                             <  4:330085/129‑1 (MQ=255)
                                gCACCCTCGGCACCATCGCCGCCATGGCGCCTCTGCTGGGTCTGCTGGGCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTg                                                                                                                             >  3:330085/1‑129 (MQ=255)
                                  aCCCTCGGCACCATCGCCGGCATGGGGCCTCTGCTGGGTCTGCTGGGCACCGTGCTAGTCATGATCGACATTTTCA‑‑GCGCCTTGATGGGCTCTCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTcac                                                                                                       <  7:291431/149‑1 (MQ=255)
                                    ccTCGGCACCATCGCCGCCATGGCGCCTCTGCTGGGTCTGCTGGGCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGCCCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTcacca                                                                                                     >  4:117181/1‑149 (MQ=255)
                                    ccTCGGCACCATCGCCGCCATGGCGCCTCTGCTGGGTCTGCTGGGCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTcacca                                                                                                     >  5:187656/1‑149 (MQ=255)
                                    ccTCGGCACCATCGCCGCCATGGCGCCTCTGCTGGGTCTGCTGGGCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTcacca                                                                                                     >  5:221574/1‑149 (MQ=255)
                                    ccTCGGCACCATCGCCGCCATGGCGCCTCTGCTGGGTCTGCTGGGCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTcacca                                                                                                     >  5:77558/1‑149 (MQ=255)
                                            ccATCGCCGCCATGGCGCCTCTGCTGGGTCTGCTGGGCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCt                                                                                             <  5:172090/149‑1 (MQ=255)
                                               tCGCCGCCATGGCGCCTCTGCTGGGTCTGCTGGGCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGc                                                                                          <  3:212743/149‑1 (MQ=255)
                                               tCGCCGCCATGGCGCCTCTGCTGGGTCTGCTGGGCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGc                                                                                          <  6:221574/149‑1 (MQ=255)
                                               cttgatcgcctcctgctccatgccgatcaccagttcatcgatgcggcgcagcaggaaacggtggaagaacactgccggaataccgaccatcaggccaGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTg                                                                                            >  1:131798‑M1/98‑149 (MQ=255)
                                                    tcgcctcctgctccatgccgatcaccagttcatcgatgcggcgcagcaggaaacggtggaagaacactgccggaataccgaccatcaggccaGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCt                                                                                             >  4:107630‑M1/93‑143 (MQ=255)
                                                    tcgcctcctgctccatgccgatcaccagttcatcgatgcggcgcagcaggaaacggtggaagaacactgccggaataccgaccatcaggccaGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCt                                                                                             <  3:107630‑M1/51‑1 (MQ=255)
                                                    gccATGGCGCCTCTGCTGGGTCTGCTGGGCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATg                                                                                    <  2:58878/149‑1 (MQ=255)
                                                          gcgcCTCTGCTGGGTCTGCTGGGCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTCGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCgg                                                                               >  1:306704/1‑149 (MQ=255)
                                                              ctctGCTGGGTCTGCTGGGCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTAtt                                                                           <  4:290220/149‑1 (MQ=255)
                                                                 tgctgggtctgctgggCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCg                                                                        >  6:298970/1‑149 (MQ=255)
                                                                   ctgggtctgctgggCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGc                                                                      <  3:186195/149‑1 (MQ=255)
                                                                    tgggtctgctgggCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCgg                                                                       >  6:44697/1‑147 (MQ=255)
                                                                    gggggctgctgggCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCa                                                                     <  4:90863/148‑1 (MQ=255)
                                                                      ggtctgctgggCACCGTGCTAGGCATGATCGACATTTTCATCGCCCCTATTTGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCa                                                                     <  1:311816/149‑1 (MQ=255)
                                                                      ggtctgctgggCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCa                                                                     <  2:21053/147‑1 (MQ=255)
                                                                       gtctgctgggCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAgtg                                                                  <  3:225645/149‑1 (MQ=255)
                                                                        tctgctgggCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAgtgt                                                                 >  4:294526/1‑149 (MQ=255)
                                                                            cttggCACCGTGCTAGGCATGATCGACTTTTTCA‑‑GCGCCTTCATGGGCTCGCATATGACCGCCAACTCCGACGTGCTGGCCTGTGGTTTCTCCAAGGCCCTGGTCACCACTGCGGCTGTCCTGTTGGTCGGTATTCCGGCAGTGttctt                                                             <  5:243449/146‑1 (MQ=255)
                                                                               ggCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGttcttc                                                            <  7:153360/147‑1 (MQ=255)
                                                                               ggCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGttcttc                                                            <  2:370439/147‑1 (MQ=255)
                                                                               ggCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCa                                                          <  5:298970/149‑1 (MQ=255)
                                                                                  aCCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCg                                                       >  4:165010/1‑149 (MQ=255)
                                                                                    cGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGtt                                                     <  6:77558/149‑1 (MQ=255)
                                                                                      tGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTc                                                   <  2:306704/149‑1 (MQ=255)
                                                                                           ggCATGATCGACATTTTCA‑‑GGGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCctg                                                <  3:55347/147‑1 (MQ=255)
                                                                                            gCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCctgctg                                             >  6:211385/1‑149 (MQ=255)
                                                                                            gCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCctgctg                                             >  8:243416/1‑149 (MQ=255)
                                                                                             cATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCtgctgc                                            <  6:74539/149‑1 (MQ=255)
                                                                                             cATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCtgctgc                                            >  4:137537/1‑149 (MQ=255)
                                                                                              aTGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTgcg                                           >  1:313200/1‑149 (MQ=255)
                                                                                                  tCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTg                                                                                       <  3:85467/101‑1 (MQ=255)
                                                                                                  tCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTg                                                                                       >  4:85467/1‑101 (MQ=255)
                                                                                                  tCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGcgccg                                        >  8:87006/1‑148 (MQ=255)
                                                                                                  tCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGcgccg                                        >  3:251918/1‑148 (MQ=255)
                                                                                                     aCATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTcc                                                  >  6:354603/1‑135 (MQ=255)
                                                                                                     aCATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTcc                                                  <  5:354603/135‑1 (MQ=255)
                                                                                                     aCATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGCGCCGCATc                                    >  1:45565/1‑149 (MQ=255)
                                                                                                     aCATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGCGCCGCATc                                    >  6:57754/1‑149 (MQ=255)
                                                                                                       aTTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGCGCCGCATCGa                                  >  7:274504/1‑149 (MQ=255)
                                                                                                       aTTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGCGCCGCATCGa                                  <  5:44697/149‑1 (MQ=255)
                                                                                                        ttttCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGCGCCGCATCGAt                                 <  7:243416/149‑1 (MQ=255)
                                                                                                        ttttCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGCGCCGCATCGAt                                 <  4:251918/149‑1 (MQ=255)
                                                                                                          ttCC‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGGGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGCGCCGCATCGATg                                <  8:341787/148‑1 (MQ=255)
                                                                                                                 cgcCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGCGCCGCATCGATGAACTgg                          <  7:87006/149‑1 (MQ=255)
                                                                                                                 cgcCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGCGCCGCATCGATGAACTgg                          <  3:294526/149‑1 (MQ=255)
                                                                                                                  gcCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGCGCCGCATCGATGAACTGGt                         >  3:69419/1‑149 (MQ=255)
                                                                                                                        aTGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGCGCCGCATCGATGAACTGGTGATCgg                   >  6:5504/1‑149 (MQ=255)
                                                                                                                        aTGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGCGCCGCATCGATGAACTGGTGATCg                    <  3:165010/148‑1 (MQ=255)
                                                                                                                                gCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGCGCCGCATCGATGAACTGGTGATCGGCATGGAg            <  6:187656/148‑1 (MQ=255)
                                                                                                                                 cAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGCGCCGCATCGATGAACTGGTGATCGGCATGGAg            >  5:139570/1‑147 (MQ=255)
                                                                                                                                  aGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGCGCCGCATCGATGAACTGGTGATCGGCATGGAGCag         <  2:257625/149‑1 (MQ=255)
                                                                                                                                   gATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGCGCCGCATCGATGAACTGGTGATCGGCATGGAGCagg        <  5:211385/149‑1 (MQ=255)
                                                                                                                                        ccGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGCGCCGCATCGATGAACTGGTGATCGGCATGGAGCAGGAGGc    >  1:219397/1‑148 (MQ=255)
                                                                                                                                         cGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGCGCCGCATCGATGAACTGGTGATCGGCATGGAGCAGGAGGCGa  >  4:235912/1‑149 (MQ=255)
                                                                                                                                                |                                                                                                                                             
GCGCGTCATCCATGAACTGGAGCGCTACATCAGCACCCTCGGCACCATCGCCGCCATGGCGCCTCTGCTGGGTCTGCTGGGCACCGTGCTAGGCATGATCGACATTTTCA‑‑GCGCCTTCATGGGCTCGCAGATGACCGCCAACGCCGCCGTGCTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCGGCTGGCCTGATGGTCGGTATTCCGGCAGTGTTCTTCCACCGTTTCCTGCTGCGCCGCATCGATGAACTGGTGATCGGCATGGAGCAGGAGGCGA  >  NC_002947/2142879‑2143162

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.