New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2418682 = | 37 (0.620) | 4 (0.070) | 4/252 | NT | 9.8% | coding (1717/1764 nt) | PP_2119 | ABC transporter permease/ATP‑binding protein |
? | NC_002947 | 2418728 = | 39 (0.680) | coding (1763/1764 nt) | PP_2119 | ABC transporter permease/ATP‑binding protein |
AAAAAGCTGCCATCACGCAATGGCAGCCAGGTCGAGCACTTACGCAACAGTTGAGGCAAATCTTCTCAGGCAATTACTACAGAAATGTTACAAGGCCACGACACGCTAGCCCGTGGTGAATTGCAGCGCTGCCAGCCGCGCATACAACGGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2418834‑2418682 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgggctAGCGTGTCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGCTGTACAGCGGCCTCAGC > NC_002947/2418728‑2418873 AAAAAGCTGCCATCACGCAATGGCAGCCAGGTCGAGCACTTACGCAACAGTTGAGGCAAATCTTCTCAGGCAATTACTACAGAAATGTTACAAGGCCACGACACGCTAGCCCGTGGTGAATTGCAGCGCTGCCAGCCGCGCATACAACG < 8:99153/149‑1 AAAAGCTGCCATCACGCAATGGCAGCCAGGTCGAGCACTTACGCAACAGTTGAGGCAAATCTTCTCAGGCAATTACTACAGAAATGTTACAAGGCCACGACACGCTAGCCCGTGGTGAATTGCAGCGCTGCCAGCCGCGCATACAACGG < 3:191776/149‑1 AAAGCTGCCATCACGCACAGTCAGCCAGGTCGAGCACTTACGCAACAGTTGAGGCAAATCTTCTCAGGCAATTACTACTGAAATGATACAAGGCCACGACACGCTAGCCCGTGGTGAATTGCAGCGCTGCCAGCCGCGCATACAACGGG < 5:368953/149‑1 AAGCTGCCATCACGCAATGGCAGCCAGGTCGAGCACTTACGCAACAGTTGAGGCAAATCTTCTCAGGCAATTACTACAGAAATGTTACAAGGCCACGACACGCTAGCCCGTGGTGAATTGCAGCGCTGCCAGCCGCGCATACAACGGGC < 4:34501/149‑1 GCTAGCCCGTGGTGAATTGCAGCGCTGCCAGCCGCGCATACAACGGGCTAGCGTGTCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGG > 3:107173/1‑147 GCCCGTGGTGAATTGCAGCGCTGCCAGCCGCGCATACAACGGGCTAGCGTGTCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACT > 3:283505/1‑104 GCCCGTGGTGAATTGCAGCGCTGCCAGCCGCGCATACAACGGGCTAGCGTGTCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACT < 4:283505/104‑1 GTGAATTGCAGCGCTGCCAGCCGCGCATACAACGGGCTAGCGTGTCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTG < 4:107173/149‑1 GGGCTAGCGTGTCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGCTGTACAGCGGCCTCA < 3:34501/149‑1 GCTAGCGTGTCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGCTGTACAGCGGCCTCAGC < 4:191776/149‑1 AAAAAGCTGCCATCACGCAATGGCAGCCAGGTCGAGCACTTACGCAACAGTTGAGGCAAATCTTCTCAGGCAATTACTACAGAAATGTTACAAGGCCACGACACGCTAGCCCGTGGTGAATTGCAGCGCTGCCAGCCGCGCATACAACGGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2418834‑2418682 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgggctAGCGTGTCGTGGCCTTGTAACATTTCTGTAGTAATTGCCTGAGAAGATTTGCCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCGTGATGGCAGCTTTTTTTTGGCCTGCCAGTAATGAGGCTGTACAGCGGCCTCAGC > NC_002947/2418728‑2418873 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |