| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2590693 | 47 (0.780) | 5 (0.090) | 5/256 | NT | 10.3% | coding (37/426 nt) | PP_2268 | endodeoxyribonuclease I |
| ? | NC_002947 | = 2590730 | 42 (0.730) | coding (74/426 nt) | PP_2268 | endodeoxyribonuclease I | |||||
TGAATCCGTAGCCGAACAAGAACAAGAAGAAAAAGACGAGTTCGAAGAAGAGGAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2590541‑2590693‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaagCCCATGCCGACAGCCGTTAGTTGGTCTGCGGCACGTTCTTCAAGCCCGGAGCGGAACCCAT < NC_002947/2590730‑2590670 TGAATCCGTAGCCGAACAAGAACAAGAAGAAAAAGACGAGTTCGAAGAAGAGGAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTT > 4:175488/1‑149 ATCCGTAGCCGAACAAGAACAAGAAGAAAAAGACGAGTTCGAAGAAGAGGAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAA < 1:202498/149‑1 CCGTAGCCGAACAAGAACAAGAAGAAAAAGACGAGTTCGAAGAAGAGGAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAG > 2:232090/1‑148 GAAGAAGAGGAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGACAGCCGTTAGTTGGTCTGCGGCACGTTC < 4:223811/148‑1 GAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGCCCATGCCGACAGCCGTTAGTTGGTCTGCGGCACGTTCTTCAAG > 3:157036/1‑145 GAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGCCCATGCCGACAGCCGTTAGTTGGTCTGCGGCACGTTCTTCAAG < 4:157036/145‑1 AAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGCCCATGCCGACAGCCGTTAGTTGGTCTGCGGCACGTTCTTCAA < 1:310039/140‑1 AAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGCCCATGCCGACAGCCGTTAGTTGGTCTGCGGCACGTTCTTCAA > 2:310039/1‑140 TGAAGCCCATGCCGACAGCCGTTAGTTGGTCTGCGGCACGTTCTTCAAGCCCGGAGCGGAACCCAT > 3:123348/1‑66 TGAAGCCCATGCCGACAGCCGTTAGTTGGTCTGCGGCACGTTCTTCAAGCCCGGAGCGGAACCCAT < 4:123348/66‑1 TGAATCCGTAGCCGAACAAGAACAAGAAGAAAAAGACGAGTTCGAAGAAGAGGAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2590541‑2590693‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaagCCCATGCCGACAGCCGTTAGTTGGTCTGCGGCACGTTCTTCAAGCCCGGAGCGGAACCCAT < NC_002947/2590730‑2590670 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |