New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2590693 | 47 (0.780) | 5 (0.090) | 5/256 | NT | 10.3% | coding (37/426 nt) | PP_2268 | endodeoxyribonuclease I |
? | NC_002947 | = 2590730 | 42 (0.730) | coding (74/426 nt) | PP_2268 | endodeoxyribonuclease I |
CCGTAGCCGAACAAGAACAAGAAGAAAAAGACGAGTTCGAAGAAGAGGAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTT > NC_002947/2590546‑2590840 | ccGTAGCCGAACAAGAACAAGAAGAAAAAGACGAGTTCGAAGAAGAGGAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAG > 2:232090‑M1/1‑148 (MQ=255) gCCGAACAAGAACAAGAAGAAAAAGACGAGTTCGAAGAAGAGGAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTg < 8:50149/149‑1 (MQ=255) gaacaagaacaaGAAGAAAAAGAAGAGTTCGAAGAAGAGGATGAAGGTGGCGAAACCAAAACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCCCACCGGGCTGGTAGAAAGTGca > 8:325908/1‑147 (MQ=255) acaagaacatgaAGAAAAAGAGGAGTTCGAAGATGAGGAAGAAGGTTGCGAAAGCAAGACTTACGAAGAAGACTTCTAAGACGCCTCTGGTTGCCGATAACGTTGGACTCAAATATGGGTTGCTCTCGGGGCTTGAAGAACGTGCCggt < 6:360793/149‑3 (MQ=255) agaacaacaaGAAAAAGACGAGTTCGAAGAAGAGGAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGAc < 5:97/149‑1 (MQ=255) gaacaagaaGAAAAAGCCGAGATAGAAGAAGAGGAAGAAGGTGGCGAAAGCAACACTTACCAAGAAGACTTCTACGACGCCTCTGGATGCCGAAAAAGTTGGACTCAAATATGGGTTCGGCTACCGCCTAGAAGAACGTGCAGCAGAc > 8:254513/1‑148 (MQ=255) gaacaagaaGAAAAAGACGAGTTCGAAGAAGAGGAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGAcc < 4:328772/149‑1 (MQ=255) acaagaaGAAAAAGACGAGTTCGAAGAAGAGGAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCaa > 3:239120/1‑149 (MQ=255) caagaaGAAAAAGACGAGTTCGAAGAAGAGGAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAAc < 4:239120/149‑1 (MQ=255) gaagaaAAAGACGAGTTCGAAGAAGAGGAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTaa > 6:29835/1‑149 (MQ=255) agaaAAAGACGAGTTCGAAGAAGAGGAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACg < 5:29835/149‑1 (MQ=255) agaaAAAGACGAGTGCGAAGAAGAGGAAGAAGGTGGCTAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAAc < 2:348400/148‑1 (MQ=255) aaaGACGAGTTCGAAGAAGAGGAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTg > 8:267629/1‑149 (MQ=255) gaagaaGAGGAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGaacgtgccgacagccgttagttggtctgcggcacgttc < 4:223811‑M1/148‑39 (MQ=255) tagagTAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGTCTTCTAAGACTCCTCTGGATGCCTAATAATTGGGTCTCAAATTTGGGTTCGGCTCCGGGCTTGAAGAACGTGCCGGTTACCAAGTAACGGGTGTCGGCATTGGCTTCa < 7:325908/147‑1 (MQ=255) gagGAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGAc < 4:23487/118‑1 (MQ=255) gagGAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGAc > 3:23487/1‑118 (MQ=255) atgcagaacGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACttt < 8:331773/145‑1 (MQ=255) gaagaaGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGcccatgccgacagccgttagttggtctgcggcacgttcttcaag > 3:157036‑M1/1‑101 (MQ=255) gaagaaGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGcccatgccgacagccgttagttggtctgcggcacgttcttcaag < 4:157036‑M1/145‑45 (MQ=255) aagGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGcccatgccgacagccgttagttggtctgcggcacgttcttcaa > 2:310039‑M1/1‑97 (MQ=255) aagGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGcccatgccgacagccgttagttggtctgcggcacgttcttcaa < 1:310039‑M1/140‑44 (MQ=255) gTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCt > 2:362796/1‑149 (MQ=255) gCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTgg < 1:232090/148‑1 (MQ=255) gAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGTTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTc < 7:50891/143‑1 (MQ=255) gAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTc > 8:50891/1‑143 (MQ=255) aaGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGtt < 7:267629/149‑1 (MQ=255) gCAACACTTACGAAGAAGACTTCTAAGACGGCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTcc < 7:208754/149‑1 (MQ=255) aaCACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTccc > 5:193347/1‑148 (MQ=255) ttACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTATCGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATAcc > 4:164884/1‑149 (MQ=255) ttACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATAcc > 1:135082/1‑149 (MQ=255) aagaagACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGAcc > 7:146644/1‑149 (MQ=255) cTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGaaa < 6:186974/149‑1 (MQ=255) tAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTc > 8:237185/1‑149 (MQ=255) aCGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACaa < 8:35823/149‑1 (MQ=255) cGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACt > 2:207373/1‑149 (MQ=255) gAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACtt > 2:44947/1‑149 (MQ=255) aaaaaGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTc > 8:61578/1‑149 (MQ=255) aaaaGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTc < 7:61578/148‑1 (MQ=255) aaaaGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCg < 1:207373/149‑1 (MQ=255) aaGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCa < 3:175488/149‑1 (MQ=255) aGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCTCGCGAAAGTTCACAAGTACACCCCGGACTTCGCa < 1:44947/149‑1 (MQ=255) gggACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTCTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAg > 6:329619/1‑149 (MQ=255) ggACTCAAATATGGGTTCCGATCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGc < 8:146644/149‑1 (MQ=255) aaaTATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAAc < 2:135082/147‑1 (MQ=255) aaaTATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACgg > 8:215859/1‑149 (MQ=255) aaaTATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACgg > 3:104745/1‑149 (MQ=255) atGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGcttca < 4:123348‑M2/66‑6 (MQ=255) atGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGcttca > 3:123348‑M2/1‑61 (MQ=255) ggTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCAtt < 7:215859/149‑1 (MQ=255) ttCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGt < 7:120144/149‑1 (MQ=255) tCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGaaa > 8:85743/1‑148 (MQ=255) tCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAAc > 2:55613/1‑149 (MQ=255) cGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACt > 4:167095/1‑148 (MQ=255) gggCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCTGACGGCATCATTGTCGAAACTaa < 7:237185/149‑1 (MQ=255) cTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGcttcaagcccggagcggaacccatatttgagtcccactttttcggcatccagaggcgtcttagaagtcttcttcgtaagtgttgctttcgccaccttcttc < 4:157036‑M2/145‑102 (MQ=255) cTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGcttcaagcccggagcggaacccatatttgagtcccactttttcggcatccagaggcgtcttagaagtcttcttcgtaagtgttgctttcgccaccttcttc > 3:157036‑M2/1‑44 (MQ=255) ttGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGcttcaagcccggagcggaacccatatttgagtcccactttttcggcatccagaggcgtcttagaagtcttcttcgtaagtgttgctttcgccacctt > 2:310039‑M2/1‑43 (MQ=255) ttGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGcttcaagcccggagcggaacccatatttgagtcccactttttcggcatccagaggcgtcttagaagtcttcttcgtaagtgttgctttcgccacctt < 1:310039‑M2/140‑98 (MQ=255) tGAAGcccatgccgacagccgttagttggtctgcggcacgttcttcaagcccggagcggaacccat < 4:123348‑M1/66‑62 (MQ=255) tGAAGcccatgccgacagccgttagttggtctgcggcacgttcttcaagcccggagcggaacccat > 3:123348‑M1/1‑5 (MQ=255) agaaCGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCTCTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGtt > 3:47027/1‑149 (MQ=255) gaaCGTGCCGCAGACCAACTAACGGCTGTCGGCACGTTcttcaagcccggagcggaacccatatttgagtcccactttttcggcatccagaggcgtcttagaagtcttcttcgtaagtgttgctttcgccaccttcttcctcttcttc < 4:223811‑M2/148‑111 (MQ=255) | CCGTAGCCGAACAAGAACAAGAAGAAAAAGACGAGTTCGAAGAAGAGGAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTT > NC_002947/2590546‑2590840 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |