| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2590693 | 47 (0.780) | 5 (0.090) | 5/256 | NT | 10.3% | coding (37/426 nt) | PP_2268 | endodeoxyribonuclease I |
| ? | NC_002947 | = 2590730 | 42 (0.730) | coding (74/426 nt) | PP_2268 | endodeoxyribonuclease I | |||||
AAGAGGAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCTGGTCA > NC_002947/2590588‑2590876 | tagagTAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGTCTTCTAAGACTCCTCTGGATGCCTAATAATTGGGTCTCAAATTTGGGTTCGGCTCCGGGCTTGAAGAACGTGCCGGTTACCAAGTAACGGGTGTCGGCATTGGCTTCa < 7:325908/147‑1 (MQ=255) atgcagaacGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACttt < 8:331773/145‑1 (MQ=255) gTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCt > 2:362796/1‑149 (MQ=255) gCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTgg < 1:232090/148‑1 (MQ=255) gAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGTTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTc < 7:50891/143‑1 (MQ=255) gAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTc > 8:50891/1‑143 (MQ=255) aaGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGtt < 7:267629/149‑1 (MQ=255) gCAACACTTACGAAGAAGACTTCTAAGACGGCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTcc < 7:208754/149‑1 (MQ=255) aaCACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTccc > 5:193347/1‑148 (MQ=255) ttACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTATCGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATAcc > 4:164884/1‑149 (MQ=255) ttACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATAcc > 1:135082/1‑149 (MQ=255) aagaagACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGAcc > 7:146644/1‑149 (MQ=255) cTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGaaa < 6:186974/149‑1 (MQ=255) tAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTc > 8:237185/1‑149 (MQ=255) aCGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACaa < 8:35823/149‑1 (MQ=255) cGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACt > 2:207373/1‑149 (MQ=255) gAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACtt > 2:44947/1‑149 (MQ=255) aaaaaGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTc > 8:61578/1‑149 (MQ=255) aaaaGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTc < 7:61578/148‑1 (MQ=255) aaaaGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCg < 1:207373/149‑1 (MQ=255) aaGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCa < 3:175488/149‑1 (MQ=255) aGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCTCGCGAAAGTTCACAAGTACACCCCGGACTTCGCa < 1:44947/149‑1 (MQ=255) gggACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTCTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAg > 6:329619/1‑149 (MQ=255) ggACTCAAATATGGGTTCCGATCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGc < 8:146644/149‑1 (MQ=255) aaaTATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAAc < 2:135082/147‑1 (MQ=255) aaaTATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACgg > 8:215859/1‑149 (MQ=255) aaaTATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACgg > 3:104745/1‑149 (MQ=255) atGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGcttca < 4:123348‑M2/66‑6 (MQ=255) atGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGcttca > 3:123348‑M2/1‑61 (MQ=255) ggTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCAtt < 7:215859/149‑1 (MQ=255) ttCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGt < 7:120144/149‑1 (MQ=255) tCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGaaa > 8:85743/1‑148 (MQ=255) tCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAAc > 2:55613/1‑149 (MQ=255) cGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACt > 4:167095/1‑148 (MQ=255) gggCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCTGACGGCATCATTGTCGAAACTaa < 7:237185/149‑1 (MQ=255) cTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGcttcaagcccggagcggaacccatatttgagtcccactttttcggcatccagaggcgtcttagaagtcttcttcgtaagtgttgctttcgccaccttcttc < 4:157036‑M2/145‑102 (MQ=255) cTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGcttcaagcccggagcggaacccatatttgagtcccactttttcggcatccagaggcgtcttagaagtcttcttcgtaagtgttgctttcgccaccttcttc > 3:157036‑M2/1‑44 (MQ=255) ttGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGcttcaagcccggagcggaacccatatttgagtcccactttttcggcatccagaggcgtcttagaagtcttcttcgtaagtgttgctttcgccacctt > 2:310039‑M2/1‑43 (MQ=255) ttGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGcttcaagcccggagcggaacccatatttgagtcccactttttcggcatccagaggcgtcttagaagtcttcttcgtaagtgttgctttcgccacctt < 1:310039‑M2/140‑98 (MQ=255) agaaCGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCTCTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGtt > 3:47027/1‑149 (MQ=255) gaaCGTGCCGCAGACCAACTAACGGCTGTCGGCACGTTcttcaagcccggagcggaacccatatttgagtcccactttttcggcatccagaggcgtcttagaagtcttcttcgtaagtgttgctttcgccaccttcttcctcttcttc < 4:223811‑M2/148‑111 (MQ=255) aaCGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGtttt < 6:193347/149‑1 (MQ=255) ccGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGCCCT‑GCGAAACTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTTTCGAATAAAAGGGCCGTTTTTTTAcc > 8:307316/1‑149 (MQ=255) aCCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGAc > 5:19765/1‑149 (MQ=255) aCCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGAc > 8:220967/1‑149 (MQ=255) aCCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTAAACCCGACCT‑GCGAAAGTTCACAATTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGCCCGAGGaa > 8:127156/1‑148 (MQ=255) tAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCTAGGACCGCCa > 4:100926/1‑148 (MQ=255) tgatGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑TCGAAAGTTCACAAGTACACCCCTGACTTCGCACTAGCGAACGTCATCATTGTCGAAACTAAGGTCCGTTTTTTGACCGAGGACCGCCAAAAGc < 7:254513/146‑1 (MQ=255) tCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAAc < 7:220967/147‑1 (MQ=255) gCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCTg > 2:272971/1‑149 (MQ=255) cATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCTgg < 6:19765/149‑1 (MQ=255) gggCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCTGGTc > 4:213559/1‑148 (MQ=255) gCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCTGGTCa > 7:74288/1‑147 (MQ=255) | AAGAGGAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGAACGTGCCGCAGACCAACTAACGGCTGTCGGCATGGGCTTCACTTTCGAAAGTCTGGTAGTTCCCTATACCCGACCT‑GCGAAAGTTCACAAGTACACCCCGGACTTCGCACTAGCGAACGGCATCATTGTCGAAACTAAGGGCCGTTTTTTGACCGAGGACCGCCAAAAGCAACTCCTGGTCA > NC_002947/2590588‑2590876 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |