| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2829353 | 40 (0.660) | 4 (0.070) | 4/254 | NT | 9.2% | coding (292/339 nt) | PP_2481 | hypothetical protein |
| ? | NC_002947 | = 2829365 | 41 (0.710) | coding (304/339 nt) | PP_2481 | hypothetical protein | |||||
ATTGAACAGGCCGGGCGTTTTGTCTTCGTCGAGCGCTGGGCCAGCCATGAGGCGATAGCGCGCCATCGGCAGATGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2829200‑2829353‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcggGTTCGATGTCCTCCGCCAGCGCTTCAAGCACATAAACCTGACGATCGCTTAGCAGCTCGCCCAAGGCATTGGCCATGGCCGTGTAATGTGGCATCTGCCGATGGCGCGCTATCGCCTCATGGCTGGCCCAGCGCTCGACGAAGA < NC_002947/2829365‑2829222 ATTGAACAGGCCGGGCGTTTTGTCTTCGTCGAGCGCTGGGCCAGCCATGAGGCGATAGCGCGCCATCGGCAGATGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCT > 5:352269/1‑149 AACAGGCCGGGCGTTTTGTCTTCGTCGAGCGCTGGGCCAGCCATGAGGCGATAGCGCGCCATCGGCAGATGCCACATTACACGGCCATGGCCAATGCGTTGGGCGAGCTGCTAAGCGATCGGCAGGGTTATGTGGTTGAAGGGGTGGC > 6:21367/1‑148 AACAGGCCGGGCGTTTTGTCTTCGTCGAGCGCTGGGCCAGCCATGAGGCGATAGCGCGCCATCGGCAGATGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGC < 5:21367/148‑1 CGTCGAGCGCTGGGCCAGCCATGAGGCGATAGCGCGCCATCGGCAGATGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGGTTCGATGTCCTCCGCCAG < 8:210803/147‑1 CGCTGGGCCAGCCATGAGGCGATAGCGCGCCATCGGCAGATGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTG < 3:96772/117‑1 CGCTGGGCCAGCCATGAGGCGATAGCGCGCCATCGGCAGATGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTG > 4:96772/1‑117 ACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGGTTCGATGTCCTCCGCCAGCGCTTCAAGCA < 7:334556/107‑1 ACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGGTTCGATGTCCTCCGCCAGCGCTTCAAGCA > 8:334556/1‑107 GTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGCACCCGCCAGCGCTTCAAGCACATAAACCTGACGATCGCTTAGCAGCTCGCCCAAGGCATTGGCCATGGCCGTGTAATGTGGCATCTGCCGATGGCGCGCTATCGCCTCA > 2:159664/1‑149 TGGCGGGTTCGATTTCCTCCGCCAGCGCTTCAAGCACATAAACCTGACGATCGCTTAGCAGCTCGCCCAAGGCATTGGCCATGGCCGTGTAATGTGGCATCTGCCGATGGCGCGCTATCGCCTCATGGCTGGCCCAGCGCTCGACGAtg < 7:240464/149‑3 GCGGGTTCGATGTCCTCCGCCAGCGCTTCAAGCACATAAACCTGACGATCGCTTAGCAGCTCGCCCAAGGCATTGGCCATGGCCGTGTAATGTGGCATCTGCCGATGGCGCGCTATCGCCTCATGGCTGGCCCAGCGCTCGACGAAGA < 4:207547/148‑1 GCGGGTTCGATGTCCTCCGCCAGCGCTTCAAGCACATAAACCTGACGATCGCTTAGCAGCTCCCCCAAGGCATTGGCCATGGCCGTGTAATCTGGCATCTCCAGATGGCGCGCTATCGCCTCATGGCTGGCCCAGCGATCGACGAAGA > 4:185954/1‑148 ATTGAACAGGCCGGGCGTTTTGTCTTCGTCGAGCGCTGGGCCAGCCATGAGGCGATAGCGCGCCATCGGCAGATGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2829200‑2829353‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcggGTTCGATGTCCTCCGCCAGCGCTTCAAGCACATAAACCTGACGATCGCTTAGCAGCTCGCCCAAGGCATTGGCCATGGCCGTGTAATGTGGCATCTGCCGATGGCGCGCTATCGCCTCATGGCTGGCCCAGCGCTCGACGAAGA < NC_002947/2829365‑2829222 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |