New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2829353 | 40 (0.660) | 4 (0.070) | 4/254 | NT | 9.2% | coding (292/339 nt) | PP_2481 | hypothetical protein |
? | NC_002947 | = 2829365 | 41 (0.710) | coding (304/339 nt) | PP_2481 | hypothetical protein |
CAGGCCGGGCGTTTTGTCTTCGTCGAGCGCTGGGCCAGCCATGAGGCGATAGCGCGCCATCGGCAGATGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGTGATAGTTGATCGACATGGTCGGCGTTTTCGCAAACTTCGTCTGAGCCTGACTGCCGCATGCAATTACGCCTGCACCTACTGTGTGGCCGATGGCCGTCG > NC_002947/2829206‑2829497 | cAGGCCGGGCGTTTTGTCTTCGTCGAGCGCTGGGCCAGCCATGAGGCGATAGCGCGCCATCGGCAGATGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCgga < 2:66168/149‑1 (MQ=255) cggCCGGGCGTGTTGGCGTCGCCGAGCGCGGGGCCAGCCAGGAGGCGAGAGCGCGCCATCGGCAGATGCCACATTACACGGCCATCGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCggag < 4:275581/148‑1 (MQ=255) ggCGTTTTGTCTTCGTCGAGCGCTGGGCCAGCCATGAGGCGATAGCGCGCCATCGGCAGATGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATc < 2:210342/149‑1 (MQ=255) gCGTTTTGTCTTCGTCGAGCGCTGGGCCAGCCATGAGGCGATAGCGCGCCATCGGCAGATGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATc > 1:216060/1‑148 (MQ=255) gTTTTGTCTTCGTCGAGCGCTGGGCCAGCCATGAGGCGATAGCGCGCCATCGGCAGATGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGaa > 5:254506/1‑149 (MQ=255) tCTTCGTCGATCGCTGGGCCAGCCATGAGGCGATAGCGCGCCATCTGGAGATGCCAGATTACACGGCCATGGCCAATGCCTTGGGGGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACccgc > 4:185954‑M2/1‑144 (MQ=255) tCTTCGTCGAGCGCTGGGCCAGCCATGAGGCGATAGCGCGCCATCGGCAGATGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACccgc < 4:207547‑M2/148‑5 (MQ=255) catcgtcgagCGCTGGGCCAGCCATGAGGCGATAGCGCGCCATCGGCAGATGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGAAATCGAACccgcca < 7:240464‑M2/147‑7 (MQ=255) cgtcgAGCGCTGGGCCAGCCATGAGGCGATAGCGCGCCATCGGCAGATGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGgttcgatgtcctccgccag < 8:210803‑M1/147‑20 (MQ=255) gAGCGCTGGGCCAGCCATGAGGCGATAGCGCGCCATCGGCAGATGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATcc > 2:110992/1‑149 (MQ=255) aGCGCTGGGCCAGCCATGAGGCGATAGCGCGCCATCGGCAGATGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATccc < 3:324437/149‑1 (MQ=255) gccagccaTGAGGCGATAGCGCGCCATCGGCAGATGCCACATTACATGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACggg > 4:223833/1‑149 (MQ=255) cagccaTGAGGCGATAGCGCGCCATCGGCAGATGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCg < 5:48690/149‑1 (MQ=255) cagccaTGAGGCGATAGCGCGCCATCGGCAGATGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCg > 7:337189/1‑149 (MQ=255) gccaTGAGGCGATAGCGCGCCATCGGCAGATGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGtt < 6:352269/149‑1 (MQ=255) caTGAGGCGATAGCGCGCCATCGGCAGATGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGt < 2:353499/149‑1 (MQ=255) tGAGGCGATAGCGCGCCATCGGCAGATGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGGTGCGATGTCCTccgccagcgcttcaagcacataaacctgac > 2:159664‑M2/1‑119 (MQ=255) gCGATAGCGCGCCATCGGCAGATGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGt > 6:374228/1‑148 (MQ=255) aTAGCGCGCCATCGGCAGATGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGTGATa < 4:8362/149‑1 (MQ=255) tAGCGCGCCATCGGCAGATGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGTGATa < 6:254506/148‑1 (MQ=255) gcCATCGGCAGATGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGTCGTTGTCGGGTGATAGTTGATc < 2:216060/149‑1 (MQ=255) gcCATCGGCAGATGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGTGATAGTTGATc < 8:337189/149‑1 (MQ=255) aTCGGCAGATGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGTGATAGTTGATCGAc < 4:277925/149‑1 (MQ=255) ataTGCCACATTACTCGGCAATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATGGTCTGGTTTATGTGCTTGAAGCGCTGGCTGAGGACATCGAACGCGCCATTGATCGCCGTACGGGCGTTGTCGGGTGTTAGTTGATCGACTTGGt < 8:240464/146‑1 (MQ=255) tGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGTGATAGTTGATCGACATGGTCGGc < 3:108322/149‑1 (MQ=255) acaTTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGgttcgatgtcctccgccagcgcttcaagca < 7:334556‑M1/107‑31 (MQ=255) acaTTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGgttcgatgtcctccgccagcgcttcaagca > 8:334556‑M1/1‑77 (MQ=255) acaTTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGTGATAGTTGATCGACATGGTCGGCGttt > 7:98281/1‑149 (MQ=255) ctttACACGGCCATGGCCAATGCGTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGATGCGCTGGCGGAGGACATTTAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGGGATAGTTGATCGACATGGTCGGCGtttt < 1:110992/147‑1 (MQ=255) caTTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTCTGTGCTTGCAGCGCTGGCGGCGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGTGATAGTTGATCGACATGGTCGGCGtttt < 3:276048/149‑1 (MQ=255) aTTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGTGATAGTTGATCGACATGGTCGGCGTTTTc < 3:207547/149‑1 (MQ=255) cacGGCCATGGCCAATGGCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGTGATAGTTGATCGACATGGTCGGCGTTTTCGCaa < 3:74124/149‑1 (MQ=255) cGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGTGATAGTTGATCGACATGGTCGGCGTTTTCGCAAAc < 5:374228/149‑1 (MQ=255) ggCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGTGATAGTTGATCGACATGGTCGGCGTTTTCGCAAACt > 3:93360/1‑149 (MQ=255) gAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGTGATAGTTGATCGACATGGTCGGCGTTTTCGCAAACTTCGTCTGAGCCTGACTGCCGCa > 6:268344/1‑149 (MQ=255) gctgctAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGTGATAGTTGATCGACATGGTCGGCGTTTTCGCAAACTTCGTCTGAGCCTGACTGCCGCATg < 7:291321/149‑1 (MQ=255) ctAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGTGATAGTTGATCGACATGGTCGGCGTTTTCGCAAACTTCGTCTGAGCCTGACTGCCGCATGCAAt > 4:142162/1‑149 (MQ=255) aaGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGTGATAGTTGATCGACATGGTCGGCGTTTTCGCAAACTTCGTCTGAGCCTGACTGCCGCATGCAATTa > 8:210233/1‑149 (MQ=255) aGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGTGATAGTTGATCGACATGGTCGGCGTTTTCGCAAACTTCGTCTGAg > 8:40180/1‑127 (MQ=255) aGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGTGATAGTTGATCGACATGGTCGGCGTTTTCGCAAACTTCGTCTGAg < 7:40180/127‑1 (MQ=255) aGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGTGATAGTTGATCGACATGGTCGGCGTTTTCGCAAACTTCGTCTGAGCCTGACTGCCGCATGCAATTAc > 3:215369/1‑149 (MQ=255) gTCAGGTTTATGTGCTTGAAGCGCTGGCGGaggacatcgcacccgccagcgcttcaagcacataaacctgacgatcgcttagcagctcgcccaaggcattggccatggccgtgtaatgtggcatctgccgatggcgcgctatcgcctca > 2:159664‑M1/1‑30 (MQ=255) tCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGTGATAGTTGATCGACATGGTCGGCGTTTTCGCAAACTTCGTCTGAGCCTGACTGCCGCATGCAATTACGCCTGCAc > 1:160139/1‑149 (MQ=255) tgCTTGAAGCGCTGGCGGAGGACATCGAACccgccagcgcttcaagcacataaacctgacgatcgcttagcagctcgcccaaggcattggccatggccgtgtaatgt < 7:334556‑M2/107‑78 (MQ=255) tgCTTGAAGCGCTGGCGGAGGACATCGAACccgccagcgcttcaagcacataaacctgacgatcgcttagcagctcgcccaaggcattggccatggccgtgtaatgt > 8:334556‑M2/1‑30 (MQ=255) cTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGTGATAGTTGATCGACATGGTCGGCg < 6:300607/85‑1 (MQ=255) cTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGTGATAGTTGATCGACATGGTCGGCg > 5:300607/1‑85 (MQ=255) cTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGTGATAGTTGATCGACATGGTCGGCGTTTTCGCAAACTTCGTCTGAGCCTGACTGCCGCATGCAATTACGCCTGCACCTACTGTGTGGcc > 3:11317/1‑149 (MQ=255) gAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGTGATAGTTGATCGACATGGTCGGCGTTTTCGCAAACTTCGTCTGAGCCTGACTGCCGCATGCAATTACGCCTGCACCTACTGTGTGGCCGa < 3:153198/148‑1 (MQ=255) gAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGTGATAGTTGATCGACATGGTCGGCGTTTTCGCAAACTTCGTCTGAGCCTGACTGCCGCATGCAATTACGCCTGCACCTACTGTGTGGCCGAt > 1:347867/1‑149 (MQ=255) gAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGTGATAGTTGATCGACATGGTCGGCGTTTTCGCAAACTTCGTCTGAGCCTGACTGCCGCATGCAATTACGCCTGCACCTACTGTGTGGCCGAt > 1:101114/1‑149 (MQ=255) aaGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGTGATAGTTGATCGACATGGTCGGCGTTTTCGCAAACTTCGTCTGAGCCTGACTGCCGCATGCAATTACGCCTGCACCTACTGTGTGGCCGAt < 7:248053/148‑1 (MQ=255) cTGGCGGAGGACATCGAACccgccagcgcttcaagcacataaacctgacgatcgcttagcagctcgcccaaggcattggccatggccgtgtaatgtggcatctgccgatggcgcgctatcgcctcatggctggcccagcgctcgacg < 8:210803‑M2/147‑129 (MQ=255) tGGCGGgttcgatttcctccgccagcgcttcaagcacataaacctgacgatcgcttagcagctcgcccaaggcattggccatggccgtgtaatgtggcatctgccgatggcgcgctatcgcctcatggctggcccagcgctcgacgatg < 7:240464‑M1/149‑144 (MQ=255) gCGGgttcgatgtcctccgccagcgcttcaagcacataaacctgacgatcgcttagcagctcgcccaaggcattggccatggccgtgtaatgtggcatctgccgatggcgcgctatcgcctcatggctggcccagcgctcgacgaaga < 4:207547‑M1/148‑145 (MQ=255) gCGGgttcgatgtcctccgccagcgcttcaagcacataaacctgacgatcgcttagcagctcccccaaggcattggccatggccgtgtaatctggcatctccagatggcgcgctatcgcctcatggctggcccagcgatcgacgaaga > 4:185954‑M1/1‑4 (MQ=255) | CAGGCCGGGCGTTTTGTCTTCGTCGAGCGCTGGGCCAGCCATGAGGCGATAGCGCGCCATCGGCAGATGCCACATTACACGGCCATGGCCAATGCCTTGGGCGAGCTGCTAAGCGATCGTCAGGTTTATGTGCTTGAAGCGCTGGCGGAGGACATCGAACCCGCCATTGATCCCCGTACGGGCGTTGTCGGGTGATAGTTGATCGACATGGTCGGCGTTTTCGCAAACTTCGTCTGAGCCTGACTGCCGCATGCAATTACGCCTGCACCTACTGTGTGGCCGATGGCCGTCG > NC_002947/2829206‑2829497 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |