New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2839904 | 36 (0.600) | 3 (0.050) | 3/250 | NT | 7.8% | coding (678/678 nt) | PP_2491 | ThiJ/PfpI family protein |
? | NC_002947 | = 2839944 | 37 (0.650) | coding (638/678 nt) | PP_2491 | ThiJ/PfpI family protein |
GACCTTCCAACACCTCCAGTTGACCGTAGAAAGCCAGACGTGTGACGTCGTGCCCTTCTCGTGCGGCAGGCGCCTCCTGCGCGTAACGTTGCAGTTCAGCAGCGTCGGTGGTGTGCTCGCGGGTGAAAACCACGTAGGCGGACATCGGGCCTCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2839750‑2839904 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctcctCCGAAGCCACCGCCCACGCGCTGCTCAACGTGCTGAGCTAAGGAGGCCCGATGTCCGCCTACGTGGTTTTCACCCGCGAGCACACCACCGACGCTGCTGAACTGCAACGTTACGCGCAGGAGGCGCCTGCCGCACGAGAAGGGCACGA < NC_002947/2839944‑2839797 GACCTTCCAACACCTCCAGTTGACCGTAGAAAGCCAGACGTGTGACGTCGTGCCCTTCTCGTGCGGCAGGCGCCTCCTGCGCGTAACGTTGCAGTTCAGCAGCGTCGGTGGTGTGCTCGCGGGTGAAAACCACGTAGGCGGACATCGGG > 6:51844/1‑149 GACCTTCCAACACCTCCAGTTGACCGTAGAAAGCCAGACGTGTGACGTCGTGCCCTTCTCGTGCGGCAGGCGCCTCCTGCGCGTAACGTTGCAGTTCAGCAGCGTCGGTGGTGTGCTCGCGGGTGAAAACCACGTAGGCGGACATCGG < 5:334435/148‑1 ACCTTCCAACACCTCCAGTTGACCGTAGAAAGCCAGACGTGTGACGTCGTGCCCTTCTCGTGCGGCAGGCGCCTCCTGCGCGTAACGTTGCAGTTCAGCAGCGTCGGTGGTGTGCTCGCGGGTGAAAACCACGTAGGCGGACATCGGGC > 3:221023/1‑149 ACCTTCCAACACCTCCAGTTGACCGTAGAAAGCCAGACGTGTGACGTCGTGCCCTTCTCGTGCGGCAGGCGCCTCCTGCGCGTAACGTTGCAGTTCAGCAGCGTCGGTGGTGTGCTCGCGGGTGAAAACCACGTAGGCGGACATCGGGC < 4:221023/149‑1 ACCTTCCAACACCTCCAGTTGACCGTAGAAAGCCAGACGTGTGACGTCGTGCCCTTCTCGTGCGGCAGGCGCCTCCTGCGCGTAACGTTGCAGTTCAGCAGCGTCGGTGGTGTGCTCGCGGGTGAAAACCACGTAGGCGGACATCGG > 3:44394/1‑147 ACCTTCCAACACCTCCAGTTGACCGTAGAAAGCCAGACGTGTGACGTCGTGCCCTTCTCGTGCGGCAGGCGCCTCCTGCGCGTAACGTTGCAGTTCAGCAGCGTCGGTGGTGTGCTCGCGGGTGAAAACCACGTAGGCGGACATCGG < 4:44394/147‑1 CCAACACCTCCAGTTGACCGTAGAAAGCCAGACGTGTGACGTCGTGCCCTTCTCGTGCGGCAGGCGCCTCCTGCGCGTAACGTTGCAGTTCAGCAGCGTCGGTGGTGTGCTCGCGGGTGAAAACCACGTAGGCGGACATCGGGCCTCCT > 7:130350/1‑149 AACACCTCCAGTTGACCGTAGAAAGCCAGACGTGTGACGTCGTGCCCTTCTCGTGCGGCAGGCGCCTCCTGCGCGTAACGTTGCAGTTCAGCAGCGTCGGTGGTGTGCTCGCGGGTGAAAACCACGTAGGCGGACATCGGGCCTCCT > 3:94913/1‑147 CTTCTCGTGCGGCAGGCGCCTCCTGCGCGTAACGTTGCAGTTCAGCAGCGTCGGTGGTGTGCTCGCGGGTGAAAACCACGTAGGCGGACATCGGGCCTCCTCCGAAGCCACCGCCCACGCGCTGCTCAACGTGCTGAGCTAAGGAGGCC < 5:351839/149‑1 GTTGCAGTTCAGCAGCGTCGGTGGTGTGCTCGCGGGTGAAAACCACGTAGGCGGACATCGGGCCTCCTCCGAAGCCACCGCCCACGCGCTGCTCAACGTGCTGAGCTAAGGAGGCCC > 7:262926/1‑117 GTTGCAGTTCAGCAGCGTCGGTGGTGTGCTCGCGGGTGAAAACCACGTAGGCGGACATCGGGCCTCCTCCGAAGCCACCGCCCACGCGCTGCTCAACGTGCTGAGCTAAGGAGGCCC < 8:262926/117‑1 TCCGAAGCCACCGCCCACGCGCTGCTCAACGTGCTGAGCTAAGGAGGCCCGATGTCCGCCTACGTGGTTTTCACCCGCGAGCACACCACCGACGCTGCTGAACTGCAACGTTACGCGCAGGAGGCGCCTGCCGCACGAGAAGGGCACGA > 4:94913/1‑149 GACCTTCCAACACCTCCAGTTGACCGTAGAAAGCCAGACGTGTGACGTCGTGCCCTTCTCGTGCGGCAGGCGCCTCCTGCGCGTAACGTTGCAGTTCAGCAGCGTCGGTGGTGTGCTCGCGGGTGAAAACCACGTAGGCGGACATCGGGCCTCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2839750‑2839904 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctcctCCGAAGCCACCGCCCACGCGCTGCTCAACGTGCTGAGCTAAGGAGGCCCGATGTCCGCCTACGTGGTTTTCACCCGCGAGCACACCACCGACGCTGCTGAACTGCAACGTTACGCGCAGGAGGCGCCTGCCGCACGAGAAGGGCACGA < NC_002947/2839944‑2839797 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |