New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2897461 =	42 (0.700)	3 (0.050)	3/254	NT	6.5%	coding (780/945 nt)	PP_2551	LysR family transcriptional regulator
	?	NC_002947	2897534 =	46 (0.800)					coding (853/945 nt)	PP_2551	LysR family transcriptional regulator

CCGAGGCCTGCAGGCGCTGGTGCCACACGACCCAGTAGCGCTGGCTGTGGTCGATGAAGCCCAGTGGTCGCCAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2897537‑2897461 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggccTCGGCCGAGCACCGCTGGTTGCGTAACCGGGTATTCGAGTTGTGGCGCCAGTC‑GCAGTTCGGGGTGCAGGGCGGGCATGCGGGTTCGCCATAGCAGCTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGG  >  NC_002947/2897534‑2897679                                                                                                                                                                                                                                  CCGAGGCCTGCAGGCGCTGGTGCCACACGACCCAGTAGCGCTGGCTGTGGTCGATGAAGCCCAGTGGTCGCCAGGCCTCGGCCGAGCACCGCTGGTTGCGTAACCGGGTATTCGAGTTGTGGCGCCAGTC‑GCAGTTCGGGGTGCAGGGC                                                                            >  1:84887/1‑149   GAGGCCTGCAGGCGCTGGTGCCACACGACCCAGTAGCGCTGGCTGTGGTCGATGAAGCCCAGTGGTCGCCAGGCCTCGGCCGAGCACCGCTGGTTGCGTAACCGGGTATTCGAGTTGTGGCGCCAGTC‑GCAGTTCGGGGTGCAGGGCG                                                                           >  4:232684/1‑148                       CCACACGACCCAGTAGCGCTGGCTGTGGTCGATGAAGCCCAGTGGTCGCCAGGCCTCGGCCGAGCACCGCTGGTTGCGTAACCGGGTATTCGAGTTGTGGCGCCAGTC‑GCAGTTCGGGGTGCAGGGCGGGCATGCGGGTTCGCCATAG                                                       <  2:84887/148‑1                                                                          GGCCTCGGCCGAGCACCGCTGGTTGCGTAACCGGGTAATCGAGTTGGGGCGCCAGTC‑GCAGTTCGGGGTGCAGGGCGGGCATGCGGGTTCGCCATAGCAGCTATGCGGTAAGCGAGGGTATTCGGCTGGGGATAGGTGCCTAGACTGGG   <  3:20504/149‑1                                                                           GCCTCGGCCGAGCACCGCTGGTTGCGTAACCGGGTATTCGAGTTGTGGCGCCAGTC‑GCAGTTCGGGGTGCAGGGCGGGCATGCGGGTTCGCCATAGCAGCTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGG  <  5:335545/149‑1                                                                             CTCGGCCGAGCACCGCTGGTTGCGTAACCGGGTATTCGAGTTGTGGCGCCAGTCGGCAGTTCGGGGTGCAGGGCGGGCATGCGGGTTCGCCATAGCAGCTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGG  >  1:97311/1‑148                                                                                                                                                                                                                                  CCGAGGCCTGCAGGCGCTGGTGCCACACGACCCAGTAGCGCTGGCTGTGGTCGATGAAGCCCAGTGGTCGCCAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2897537‑2897461 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggccTCGGCCGAGCACCGCTGGTTGCGTAACCGGGTATTCGAGTTGTGGCGCCAGTC‑GCAGTTCGGGGTGCAGGGCGGGCATGCGGGTTCGCCATAGCAGCTATGCGGTAAGCGAGGTTATTCGGCTGGGGATAGGTGCCTAGACTGGGG  >  NC_002947/2897534‑2897679

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.