| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2954393 | 46 (0.760) | 4 (0.070) | 4/252 | NT | 8.1% | coding (105/1383 nt) | PP_2586 | putative amino acid transporter |
| ? | NC_002947 | = 2954428 | 47 (0.830) | coding (70/1383 nt) | PP_2586 | putative amino acid transporter | |||||
CCGTAACTGTAGGCGGTCAGCAGCATGGCGGCGAGCGTGAGCAGGTAGGCGGTGGGCAGGTGCCCTTTGGTCATCTGGGTGACCAGCCCGTAGGTGGTGAATACGGCCAGGGGCACCATGTAGGCCAGGCCAAACAGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2954253‑2954393‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcaccGGCCGCTTCCGCAAGTCCATGAGCATGACCGCCCTGGTGCTGTTTGGCCTGGCCTACATGGTGCCCCTGGCCGTATTCACCACCTACGGGCTGGTCACCCAGATGACCAAAGGGCACCTGCCCACCGCCTACCTGCTCACGCTCG < NC_002947/2954428‑2954284 CCGTAACTGTAGGCGGTCAGCAGCATGGCGGCGAGCGTGAGCAGGTAGGCGGTGGGCAGGTGCCCTTTGGTCATCTGGGTGACCAGCCCGTAGGTGGTGAATACGGCCAGGGGCACCATGTAGGCCAGGCCAAAC < 1:69571/135‑1CCGTAACTGTAGGCGGTCAGCAGCATGGCGGCGAGCGTGAGCAGGTAGGCGGTGGGCAGGTGCCCTTTGGTCATCTGGGTGACCAGCCCGTAGGTGGTGAATACGGCCAGGGGCACCATGTAGGCCAGGCCAAAC > 2:69571/1‑135 AGGCGGTCAGCAGCATGGCGGCGAGCGTGAGCAGGTAGGCGGTGGGCAGGTGCCCTTTGGTCATCTGGGTGACCAGCCCGTAGGTGGTGAATACGGCCAGGGGCACCATGTAGGCCAGGCCAAACAGCACCGGCCGCTTCCGCAAGTC > 4:218965/1‑148 GTGAGCAGGGAGGCTGTGGGCTGGTGGCCTTTGGTCATCTGGGTGACCAGCCCGTAGGTGGTGAATACTGCCAGGGGCAACATGTATGCCAGGCCAAACAGCACCGGCCGCTTCCGCAAGTCCATGAGCATGACCGCCCTGGTGGTGTT < 4:132039/149‑1 TGAGCAGGTAGGCGGTGGGCAGGTGCCCTTTGGTCATCTGGGTGACCAGCCCGTAGGTGGTGAATACGGCCAGGGGCACCATGTAGGCCAGGCCAAACAGCACCGGCCGCTTCCGCAAGTCCATGAGCATGACCGCCCTGGTGCTGTTT < 3:218965/149‑1 AGCAGGTAGGGGGTGGGCAGGTGCCCTTTGGTCATCTGGGTGACCAGCCCGTAGGTGGTGATTACGGCAAGGGGCACCATGTAGGCCAGGCCAAACAGCACCGGCCGCTTCCGCAAGTCCATGAGCATGACCGCCCTGGTGCTGTTTG < 5:5212/148‑1 CACCGGCCGCTTCCGCAAGTCCATGAGCATGACCGCCCTGGTGCTGTTTGGCCTGGCCTACATGGTGCCCCTGGCCGTATTCACCACCTACGGGCTGGTCACCCAGATGACCAAAGGGCACCTGCCCACCGCCTACCTGCTCACGCTCG > 6:248916/1‑149 CCGTAACTGTAGGCGGTCAGCAGCATGGCGGCGAGCGTGAGCAGGTAGGCGGTGGGCAGGTGCCCTTTGGTCATCTGGGTGACCAGCCCGTAGGTGGTGAATACGGCCAGGGGCACCATGTAGGCCAGGCCAAACAGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2954253‑2954393‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcaccGGCCGCTTCCGCAAGTCCATGAGCATGACCGCCCTGGTGCTGTTTGGCCTGGCCTACATGGTGCCCCTGGCCGTATTCACCACCTACGGGCTGGTCACCCAGATGACCAAAGGGCACCTGCCCACCGCCTACCTGCTCACGCTCG < NC_002947/2954428‑2954284 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |