| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3491938 = | 59 (0.980) | 4 (0.070) | 3/254 | NT | 6.6% | coding (481/1071 nt) | PP_3096 | hypothetical protein |
| ? | NC_002947 | 3491976 = | 56 (0.980) | coding (443/1071 nt) | PP_3096 | hypothetical protein | |||||
CTCGAGCGCCACGTGCAGTATCGCGACGATGCCGCCCATGCGTTTCTCGACATCTTCTCGCACCGCATGACCACGTTGTTCTACGAGGCCTGGCAAAAATACAAATTCCACATCGAGCACGAGCGCAATGGCACCTCGGGCTTCGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3492085‑3491938‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgatgTGGAATTTGTATTTTTGCCAGGCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGGCGCTCGAGCAGCAGCTCGGTGTACGGGCGTGGCAGCACGCCCGA > NC_002947/3491976‑3492121 CTCGAGCGCCACGTGCAGTATCGCGACGATGCCGCCCATGCGTTTCTCGACATCTTCTCGCACCGCATGACCACGTTGTTCTACGAGGCCTGGCAAAAATACAAATTCCACATCGAGCACGAGCGCAATGGCACCTCGGGCTTCGAT < 3:180959/147‑1CTCGAGCGCCACGTGCAGTATCGCGACGATGCCGCCCATGCGTTTCTCGACATCTTCTCGCACCGCATGACCACGTTGTTCTACGAGGCCTGGCAAAAATACAAATTCCACATCGAGCACGAGCGCAATGGCACCTCGGGCTTCGAT < 3:28395/147‑1 CACATCGAGCACGAGCGCAATGGCACCTCGGGCTTCGATGTGGAATTTGTATTTTTGCCAGGCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGGCGCTC > 3:229891/1‑147 CACATCGAGCACGAGCGCAATGGCACCTCGGGCTTCGATGTGGAATTTGTATTTTTGCCAGGCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGGCGC > 3:330914/1‑145 CACATCGAGCACGAGCGCAATGGCACCTCGGGCTTCGATGTGGAATTTGTATTTTTGCCAGGCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGGCGC < 4:330914/145‑1 ACATCGAGCACGAGCGCAATGGCACCTCGGGCTTCGATGTGGAATTTGTATTTTTGCCAGGCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGTACGTGGCGCTCGAG > 1:129061/1‑149 GCTTCGATGTGGAATTTGTATTTTTGCCAGGCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGGCGCTCGAGCAGCAGCTCGGTGTACGGGCGTGGCAGCAC < 4:229891/149‑1 GATGTGGAATTTGTATTTTTGCCAGGCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGGCGCTCGAGCAGCAGCTCGGTGTACGGGCGTGCTGCCACGCCCG < 4:222205/149‑1 ATGTGGAATTTGTATTTTTGCCAGGCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGGCGCTCGAGCAGCAGCTCGGTGTACGGGCGTGGCAGCACGCCCGA > 6:87338/1‑149 ATGTGGAATTTGTATTTTTGCCAGGCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCG < 7:2757/81‑1 ATGTGGAATTTGTATTTTTGCCAGGCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCG > 8:2757/1‑81 CTCGAGCGCCACGTGCAGTATCGCGACGATGCCGCCCATGCGTTTCTCGACATCTTCTCGCACCGCATGACCACGTTGTTCTACGAGGCCTGGCAAAAATACAAATTCCACATCGAGCACGAGCGCAATGGCACCTCGGGCTTCGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3492085‑3491938‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgatgTGGAATTTGTATTTTTGCCAGGCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGGCGCTCGAGCAGCAGCTCGGTGTACGGGCGTGGCAGCACGCCCGA > NC_002947/3491976‑3492121 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |