New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3491938 =	59 (0.980)	4 (0.070)	3/254	NT	6.6%	coding (481/1071 nt)	PP_3096	hypothetical protein
	?	NC_002947	3491976 =	56 (0.980)					coding (443/1071 nt)	PP_3096	hypothetical protein

GAGCAGGCCGGCAAAATAGCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGGCGCTCGAGCAGCAGCTCGGTGTACGGGCGTGGCAGCACGCCCGA  >  NC_002947/3491828‑3492121                                                                                                                                                     |                                                                                                                                                   ctcgagcgccacgtacagtatcgcgacgatgccgcccatgcgtttctcgacatcttctcgcaccgcatgaccacgttgttctacgaggcctggcaaaaatacaaattccaCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGAtgt                                                                                                                                                    >  1:129061‑M1/111‑149 (MQ=255)    gagcgccacgtgcagtatcgcgacgatgccgcccatgcgtttctcgacatcttctcgcaccgcatgaccacgttgttctacgaggcctggcaaaaatacaaattccaCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGAtgtg                                                                                                                                                   >  3:229891‑M1/108‑147 (MQ=255)      gcgccacgtgcagtatcgcgacgatgccgcccatgcgtttctcgacatcttctcgcaccgcatgaccacgttgttctacgaggcctggcaaaaatacaaattccaCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGAtgtg                                                                                                                                                   <  4:330914‑M1/40‑1 (MQ=255)      gcgccacgtgcagtatcgcgacgatgccgcccatgcgtttctcgacatcttctcgcaccgcatgaccacgttgttctacgaggcctggcaaaaatacaaattccaCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGAtgtg                                                                                                                                                   >  3:330914‑M1/106‑145 (MQ=255)       gCCGGCAAAATAGCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAAtt                                                                                                                                              <  3:359331/149‑1 (MQ=255)        ccGGCAAAATAGCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAAttt                                                                                                                                             <  8:183534/149‑1 (MQ=255)              aaaTAGCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTAttt                                                                                                                                       <  6:355285/149‑1 (MQ=255)                aTAGCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTAttttt                                                                                                                                     <  4:71239/149‑1 (MQ=255)                   gCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGc                                                                                                                                   >  7:44578/1‑148 (MQ=255)                    cTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCa                                                                                                                                 <  6:223503/149‑1 (MQ=255)                     tGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAg                                                                                                                                >  1:288664/1‑149 (MQ=255)                     tGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAg                                                                                                                                >  8:336594/1‑149 (MQ=255)                      gAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAg‑g                                                                                                                              >  6:181521/1‑149 (MQ=255)                            cTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCg                                                                                                                         >  5:225400/1‑148 (MQ=255)                                    gCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGaacaac                                                                                                                >  7:56728/1‑149 (MQ=255)                                     gaaTGGTGAAGGTTGCTGTTCGAAGTTCAGCTTATGGGCGTGCGGCCCGAGGCAAACCAGGTTGAGCAGGTAGCCATCGAAGCCGGATGTGACATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACg                                                                                                               <  8:313634/148‑1 (MQ=255)                                      aaTGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGt                                                                                                              >  7:92881/1‑149 (MQ=255)                                        tGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTgg                                                                                                            <  6:286968/149‑1 (MQ=255)                                           tGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCa                                                                                                         >  5:92639/1‑149 (MQ=255)                                             aCGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCa                                                                                                         <  5:21575/147‑1 (MQ=255)                                              cGGTTGCTCTACGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGc                                                                                                      <  1:332441/149‑1 (MQ=255)                                                 ttGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGt                                                                                                   <  4:133188/149‑1 (MQ=255)                                                    ctctTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGc                                                                                                 <  7:336594/148‑1 (MQ=255)                                                     tctTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGc                                                                                                 >  8:5920/1‑147 (MQ=255)                                                     tctTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGGTGAGCAGGTAGCCATCGAAGCCCGCGGTGCCATTGCGCTCGTGCTCGAGGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACACCGGGGTCCTGCGGTGc                                                                                                 >  8:352/1‑147 (MQ=255)                                                      ctTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGc                                                                                                 >  1:53400/1‑146 (MQ=255)                                                       ttCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCgag                                                                                              >  6:368420/1‑148 (MQ=255)                                                         cGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAGCGCCTCGTAGAACAACGTGGTCATGCg                                                                                                     <  1:4994/140‑1 (MQ=255)                                                         cGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCg                                                                                                     >  2:4994/1‑139 (MQ=255)                                                          gAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGagaag                                                                                           <  7:288769/148‑1 (MQ=255)                                                            aCTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATg                                                                                        <  6:92639/149‑1 (MQ=255)                                                            aCTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATg                                                                                        >  5:121708/1‑149 (MQ=255)                                                                 aGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCga                                                                                    <  2:288664/148‑1 (MQ=255)                                                                    ttCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGaaa                                                                                >  3:43313/1‑149 (MQ=255)                                                                         ggCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGc                                                                             <  8:92881/147‑1 (MQ=255)                                                                            gcgcgGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATggg                                                                        >  5:292989/1‑149 (MQ=255)                                                                              gcgGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGAt                                                                                         >  7:178261/1‑130 (MQ=255)                                                                              gcgGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGAt                                                                                         <  8:178261/130‑1 (MQ=255)                                                                                  cccGATGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCAt                                                                  <  4:297403/149‑1 (MQ=255)                                                                                  cccGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCAt                                                                  >  3:222205/1‑149 (MQ=255)                                                                                   ccGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCAtc                                                                 <  5:181521/149‑1 (MQ=255)                                                                                        gCCAAGCATGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGAGCTCGTTCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTcgc                                                            <  3:49884/149‑1 (MQ=255)                                                                                        gCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATTCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTcgc                                                            <  4:129690/149‑1 (MQ=255)                                                                                        gCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTcgc                                                            <  1:272870/149‑1 (MQ=255)                                                                                        gCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTcgc                                                            <  3:234144/149‑1 (MQ=255)                                                                                            aCCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATa                                                        <  1:276878/149‑1 (MQ=255)                                                                                                    gAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGc                                                                             <  8:69029/120‑1 (MQ=255)                                                                                                     aGCAGGTAGCCATCGAAGCCCGCGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTg                                               <  7:352/149‑1 (MQ=255)                                                                                                     aGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTg                                               <  6:292989/149‑1 (MQ=255)                                                                                                     aGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTg                                               <  7:5920/149‑1 (MQ=255)                                                                                                        aGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGgcg                                            <  6:225400/149‑1 (MQ=255)                                                                                                            aGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGGCGCTc                                         >  5:99491/1‑148 (MQ=255)                                                                                                             cacatcgagcacgagcgcaatggcacctcgggcttcgatgTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGgcgc                                           <  4:330914‑M2/105‑1 (MQ=255)                                                                                                             cacatcgagcacgagcgcaatggcacctcgggcttcgatgTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGgcgc                                           >  3:330914‑M2/41‑145 (MQ=255)                                                                                                             cacatcgagcacgagcgcaatggcacctcgggcttcgatgTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGGCGCTc                                         >  3:229891‑M2/41‑147 (MQ=255)                                                                                                              acatcgagcacgagcgcaatggcacctcgggcttcgatgTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGTACGTGGCGCTCGag                                      >  1:129061‑M2/40‑149 (MQ=255)                                                                                                                ATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGGCGCTCGag                                      <  3:28395‑M1/147‑1 (MQ=255)                                                                                                                ATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGGCGCTCGag                                      <  3:180959‑M1/147‑1 (MQ=255)                                                                                                                        ccGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGGCGCTCGAGCAGCAGCTCg                            >  3:27314/1‑149 (MQ=255)                                                                                                                          gAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGGCGCTCGAGCTGCTGCTCgag                          <  2:53400/149‑3 (MQ=255)                                                                                                                          gAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCAGCGTCGCGATACTGCACGTGGCGCTCGAGCAGCAGCTCGgt                          <  1:82542/149‑1 (MQ=255)                                                                                                                                ccATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATTGGCGGCATCGTCGCGATACTGCACGTGGCGCTCGAGCAGCAGCTCGGTGTACgg                    <  5:202796/149‑1 (MQ=255)                                                                                                                                ccATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGGCGCTCGAGCAGCAGCTCGGTGTACgg                    <  8:56728/149‑1 (MQ=255)                                                                                                                                ccATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGGCGCTCGAGCAGCAGCTCGGTGTACgg                    <  4:28395/149‑1 (MQ=255)                                                                                                                                 cATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGGCGCTCGAGCAGCAGCTCGGTGTACggg                   >  6:321625/1‑149 (MQ=255)                                                                                                                                   ttGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACTTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGGCGCTCGAGCAGCAGCTCGGTGTACGGGCg                 >  2:52564/1‑149 (MQ=255)                                                                                                                                            gcttcgatgTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGGCGCTCGAGCAGCAGCTCGGTGTACGGGCGTGGCAGCAc        <  4:229891‑M2/140‑1 (MQ=255)                                                                                                                                              cTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGGCGCTCGAGCAGCAGCTCGGTGTACGGGCGTGGCAGCACGc      >  6:377510/1‑149 (MQ=255)                                                                                                                                              cTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGGCGCTCGAGCAGCAGCTCGGTGTACGGGCGTGGCAGCACGc      >  4:266024/1‑149 (MQ=255)                                                                                                                                                 gatgTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGGCGCTCGAGCAGCAGCTCGGTGTACGGGCGTGCTGCCACGCCCg   <  4:222205‑M2/145‑1 (MQ=255)                                                                                                                                                  atgTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGggcg                                                                      <  7:2757‑M2/78‑1 (MQ=255)                                                                                                                                                  atgTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGggcg                                                                      >  8:2757‑M2/4‑81 (MQ=255)                                                                                                                                                  atgTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGGCGCTCGAGCAGCAGCTCGGTGTACGGGCGTGGCAGCACGCCCGa  >  6:87338‑M2/4‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                   GAGCAGGCCGGCAAAATAGCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGGCGCTCGAGCAGCAGCTCGGTGTACGGGCGTGGCAGCACGCCCGA  >  NC_002947/3491828‑3492121

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.