New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3491938 =	59 (0.980)	4 (0.070)	3/254	NT	6.6%	coding (481/1071 nt)	PP_3096	hypothetical protein
	?	NC_002947	3491976 =	56 (0.980)					coding (443/1071 nt)	PP_3096	hypothetical protein

TGCGTTCAAGGTTCAGCGCATTGCGCGGCTTCTGGCTGAGCAGGCCGGCAAAATAGCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGGCGCTC  >  NC_002947/3491791‑3492082                                                                                                                                                    |                                                                                                                                                  tGCGTTCAAGGTTCAGCGCATTGCGCGGCTTCTGGCTGAGCAGGCCGGCAAAATAGCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCa                                                                                                                                                  >  2:82542/1‑149 (MQ=255)  tcgggcgtgctgccacgcccgtacaccgagctgctgctcgagcgccacgtgcagtatcgcgacgatgccgcccatgcgtttctcgacatcttctcgcaccgcatgaccacgttgttctacgaggcctggcaaaaatacaaattccaCAt                                                                                                                                                 >  6:87338‑M1/147‑149 (MQ=255)  gCGTTCAAGGTTCAGCGCATTGCGCGGCTTCTGGCTGAGCAGGCCGGCAAAATAGCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCTAGGCCACACAGGTTGAGCAGGTAGACAt                                                                                                                                                 >  4:49884/1‑149 (MQ=255)  gCGTTCAAGGTTCAGCGCATTGCGCGGCTTCTGGCTGAGCAGGCCGGCAAAATAGCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCAt                                                                                                                                                 >  4:234144/1‑149 (MQ=255)   cgggcgtggcagcacgcccgtacaccgagctgctgctcgagcgccacgtgcagtatcgcgacgatgccgcccatgcgtttctcgacatcttctcgcaccgcatgaccacgttgttctacgaggcctggcaaaaatacaaattccaCATc                                                                                                                                                <  4:222205‑M1/4‑1 (MQ=255)    gTTCAAGGTTCAGCGCATTGCGCGGCTTCTGGCTGAGCAGGCCGGCAAAATAGCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATc                                                                                                                                                >  3:71239/1‑148 (MQ=255)    gTTCAAGGTTCAGCGCATTGCGCGGCTTCTGGCTGAGCAGGCCGGCAAAATAGCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATc                                                                                                                                                >  3:297403/1‑148 (MQ=255)    gTTCAAGGTTCAGCGCATTGCGCGGCTTCTGGCTGAGCAGGCCGGCAAAATAGCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCg                                                                                                                                               <  8:250971/149‑1 (MQ=255)    gTTCAAGGTTCAGCGCATTGCGCGGCTTCTGGCTGAGCAGGCCGGCAAAATAGCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCg                                                                                                                                               <  3:287739/149‑1 (MQ=255)        gtgctgccacgcccgtacaccgagctgctgctcgagcgccacgtgcagtatcgcgacgatgccgcccatgcgtttctcgacatcttctcgcaccgcatgaccacgttgttctacgaggcctggcaaaaatacaaattccaCATCGAAGc                                                                                                                                           <  4:229891‑M1/9‑1 (MQ=255)        aaGGTTCAGCGCATTGCGCGGCTTCTGGCTGAGCAGGCCGGCAAAATAGCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGc                                                                                                                                           >  2:276878/1‑149 (MQ=255)        aaGGTTCAGCGCATTGCGCGGCTTCTGGCTGAGCAGGCCGGCAAAATAGCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGc                                                                                                                                           >  5:257028/1‑149 (MQ=255)        aaGGTTCAGCGCATTGCGCGGCTTCTGGCTGAGCAGGCCGGCAAAATAGCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGc                                                                                                                                           >  5:355285/1‑149 (MQ=255)            ttCAGCGCATTGCGCGGCTTCTGGCTGAGCAGGCCGGCAAAATAGCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGa                                                                                                                                       <  7:67175/149‑1 (MQ=255)                gcgcATTGCGCGGCTTCTGGCTGAGCAGGCCGGCAAAATAGCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTg                                                                                                                                   >  3:129690/1‑149 (MQ=255)                 cgcATTGCGCGGCTTCTGGCTGAGCAGGCCGGCAAAATAGCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTACGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGc                                                                                                                                  >  2:332441/1‑149 (MQ=255)                        cgcgGCTTCTGGCTGAGCAGGCCGGCAAAATAGCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTgcg                                                                                                                           <  6:257028/149‑1 (MQ=255)                                   gCTGAGCAGGCCGGCAAAATAGCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCg                                                                                                                 <  5:153637/148‑1 (MQ=255)                                      ctcgagcgccacgtacagtatcgcgacgatgccgcccatgcgtttctcgacatcttctcgcaccgcatgaccacgttgttctacgaggcctggcaaaaatacaaattccaCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGAtgt                                                                                                             >  1:129061‑M1/111‑149 (MQ=255)                                         gagcgccacgtgcagtatcgcgacgatgccgcccatgcgtttctcgacatcttctcgcaccgcatgaccacgttgttctacgaggcctggcaaaaatacaaattccaCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGAtgtg                                                                                                            >  3:229891‑M1/108‑147 (MQ=255)                                           gcgccacgtgcagtatcgcgacgatgccgcccatgcgtttctcgacatcttctcgcaccgcatgaccacgttgttctacgaggcctggcaaaaatacaaattccaCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGAtgtg                                                                                                            <  4:330914‑M1/40‑1 (MQ=255)                                           gcgccacgtgcagtatcgcgacgatgccgcccatgcgtttctcgacatcttctcgcaccgcatgaccacgttgttctacgaggcctggcaaaaatacaaattccaCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGAtgtg                                                                                                            >  3:330914‑M1/106‑145 (MQ=255)                                            gCCGGCAAAATAGCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAAtt                                                                                                       <  3:359331/149‑1 (MQ=255)                                             ccGGCAAAATAGCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAAttt                                                                                                      <  8:183534/149‑1 (MQ=255)                                               ggCAAAATAGCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTgc                                                                                                                            <  5:268801/125‑1 (MQ=255)                                               ggCAAAATAGCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTgc                                                                                                                            >  6:268801/1‑125 (MQ=255)                                                   aaaTAGCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTAttt                                                                                                <  6:355285/149‑1 (MQ=255)                                                     aTAGCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTAttttt                                                                                              <  4:71239/149‑1 (MQ=255)                                                        gCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGc                                                                                            >  7:44578/1‑148 (MQ=255)                                                         cTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCa                                                                                          <  6:223503/149‑1 (MQ=255)                                                          tGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAg                                                                                         >  1:288664/1‑149 (MQ=255)                                                          tGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAg                                                                                         >  8:336594/1‑149 (MQ=255)                                                           gAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAg‑g                                                                                       >  6:181521/1‑149 (MQ=255)                                                                 cTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCg                                                                                  >  5:225400/1‑148 (MQ=255)                                                                      cgcccatgcgtttctcgacatcttctcgcaccgcatgaccacgttgttctacgaggcctggcaaaaatacaaattccaCAt                                                                                                                                                 <  7:2757‑M1/3‑1 (MQ=255)                                                                      cgcccatgcgtttctcgacatcttctcgcaccgcatgaccacgttgttctacgaggcctggcaaaaatacaaattccaCAt                                                                                                                                                 >  8:2757‑M1/79‑81 (MQ=255)                                                                         gCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGaacaac                                                                         >  7:56728/1‑149 (MQ=255)                                                                          gaaTGGTGAAGGTTGCTGTTCGAAGTTCAGCTTATGGGCGTGCGGCCCGAGGCAAACCAGGTTGAGCAGGTAGCCATCGAAGCCGGATGTGACATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACg                                                                        <  8:313634/148‑1 (MQ=255)                                                                           aaTGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGt                                                                       >  7:92881/1‑149 (MQ=255)                                                                             tGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTgg                                                                     <  6:286968/149‑1 (MQ=255)                                                                                tGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCa                                                                  >  5:92639/1‑149 (MQ=255)                                                                                  aCGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGa                                                                                                                >  7:280018/1‑102 (MQ=255)                                                                                  aCGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGa                                                                                                                <  8:280018/102‑1 (MQ=255)                                                                                  aCGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCa                                                                  <  5:21575/147‑1 (MQ=255)                                                                                   cGGTTGCTCTACGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGc                                                               <  1:332441/149‑1 (MQ=255)                                                                                      ttGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGt                                                            <  4:133188/149‑1 (MQ=255)                                                                                         ctctTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGc                                                          <  7:336594/148‑1 (MQ=255)                                                                                          tctTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGc                                                          >  8:5920/1‑147 (MQ=255)                                                                                          tctTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGGTGAGCAGGTAGCCATCGAAGCCCGCGGTGCCATTGCGCTCGTGCTCGAGGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACACCGGGGTCCTGCGGTGc                                                          >  8:352/1‑147 (MQ=255)                                                                                           ctTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGc                                                          >  1:53400/1‑146 (MQ=255)                                                                                            ttCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCgag                                                       >  6:368420/1‑148 (MQ=255)                                                                                              cGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAGCGCCTCGTAGAACAACGTGGTCATGCg                                                              <  1:4994/140‑1 (MQ=255)                                                                                              cGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCg                                                              >  2:4994/1‑139 (MQ=255)                                                                                               gAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGagaag                                                    <  7:288769/148‑1 (MQ=255)                                                                                                 aCTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATg                                                 <  6:92639/149‑1 (MQ=255)                                                                                                 aCTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATg                                                 >  5:121708/1‑149 (MQ=255)                                                                                                      aGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCga                                             <  2:288664/148‑1 (MQ=255)                                                                                                         ttCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGaaa                                         >  3:43313/1‑149 (MQ=255)                                                                                                              ggCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGc                                      <  8:92881/147‑1 (MQ=255)                                                                                                                 gcgcgGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATggg                                 >  5:292989/1‑149 (MQ=255)                                                                                                                   gcgGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGAt                                                  >  7:178261/1‑130 (MQ=255)                                                                                                                   gcgGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGAt                                                  <  8:178261/130‑1 (MQ=255)                                                                                                                       cccGATGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCAt                           <  4:297403/149‑1 (MQ=255)                                                                                                                       cccGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCAt                           >  3:222205/1‑149 (MQ=255)                                                                                                                        ccGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCAtc                          <  5:181521/149‑1 (MQ=255)                                                                                                                             gCCAAGCATGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGAGCTCGTTCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTcgc                     <  3:49884/149‑1 (MQ=255)                                                                                                                             gCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATTCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTcgc                     <  4:129690/149‑1 (MQ=255)                                                                                                                             gCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTcgc                     <  3:234144/149‑1 (MQ=255)                                                                                                                             gCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTcgc                     <  1:272870/149‑1 (MQ=255)                                                                                                                                 aCCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATa                 <  1:276878/149‑1 (MQ=255)                                                                                                                                         gAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGc                                      <  8:69029/120‑1 (MQ=255)                                                                                                                                          aGCAGGTAGCCATCGAAGCCCGCGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTg        <  7:352/149‑1 (MQ=255)                                                                                                                                          aGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTg        <  7:5920/149‑1 (MQ=255)                                                                                                                                          aGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTg        <  6:292989/149‑1 (MQ=255)                                                                                                                                             aGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGgcg     <  6:225400/149‑1 (MQ=255)                                                                                                                                                 aGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGGCGCTc  >  5:99491/1‑148 (MQ=255)                                                                                                                                                    |                                                                                                                                                  TGCGTTCAAGGTTCAGCGCATTGCGCGGCTTCTGGCTGAGCAGGCCGGCAAAATAGCTGAACAGCTCACGACGCAATGCTGACGGTTGCTCTTCGAACTTCAGCTTCTGGGCGCGCGGCCCGAGGCCAACCAGGTTGAGCAGGTAGCCATCGAAGCCCGAGGTGCCATTGCGCTCGTGCTCGATGTGGAATTTGTATTTTTGCCAG‑GCCTCGTAGAACAACGTGGTCATGCGGTGCGAGAAGATGTCGAGAAACGCATGGGCGGCATCGTCGCGATACTGCACGTGGCGCTC  >  NC_002947/3491791‑3492082

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.