| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3542080 | 44 (0.730) | 3 (0.050) | 3/254 | NT | 6.3% | coding (643/966 nt) | galE | UDP‑glucose 4‑epimerase |
| ? | NC_002947 | = 3542109 | 47 (0.820) | coding (614/966 nt) | galE | UDP‑glucose 4‑epimerase | |||||
GCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGTGCATGGGCAGCCGCCAGGTCTGCCACATGCACGTAGTCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3541927‑3542080‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgcgACTACGACACGCCGGATGGCACCTGCATACGCGACTACGTGCATGTGGCAGACCTGGCGGCTGCCCATGCACTGGCAGTGGATTATCTACTGGACGGTGGCGAGCGTGCCGCGTTCAACCTGGGCAATGGCCTGGGCTTTTCGGTGCA < NC_002947/3542109‑3541962 GCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGTGCATGGGCAGCCGCCAGGTCTGCCACATGCACGTAG < 4:22535/149‑1GCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGTGCATGGGCAGCCGCCAGGTCTGCCACATGCACGTAG > 7:1946/1‑149 GGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGTGCATGGGCAGCCGCCAGGTCTGCCACATGCACGTAGTCGC < 5:228453/149‑1 GGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGTGCATGGGCAGCCGCCAGGTCTGCCACATGCACGTAGTCGC > 6:228453/1‑149 ACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGTGCATGGGCAGCCGCCAGGTCTGCCACATGCACGTAGTCGC < 3:238336/145‑1 ACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGTGCATGGGCAGCCGCCAGGTCTGCCACATGCACGTAGTCGC > 4:238336/1‑145 AAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGTGCATGGGCAGCCGCCAGGTCTGCCACATGCACGTAGTCGCGACTACGACACGCCGGATGGCACCTGCATACGCGACTAC < 2:234970/149‑1 ccgctctCCATTGCCCCGCGGGCACGCGGCACGCTCGCCACCGTCCAGTAGATACTCCACTGCCAGTGCATGGGCAGCCGCCAGGTCAGCCACATGCACGTAGTCGCGACTACGACACGCCGGATGGCACCTGCATACGCGACTACGTG < 8:241152/142‑1 CATTGCCCAGGTTGAACGCGGCACGCTCGCCCCCGTCCAGTAGATAATCCACTGCCAGTGCATGGGCAGCCGCCAGGTCTCCCACATGCACGTAGTCGCGACTACGACACGCCGGATGGCCCCTGCCTACGCGACTACGTG > 7:241152/1‑141 GCGACTACGACACGCCGGATGGCACCTGCATACGCGACTACGTGCATGTGGCAGACCTGGCGGCTGCCCATGCACTGGCAGTGGATTATCTACTGGACGGTGGCGAGCGTGCCGCGTTCAACCTGGGCAATGGCCTGGGCTTTTCGGT < 7:120868/148‑1 GACTACGACACGCCGGATGGCACCTGCATACGCGACTACGTGCATGTGGCAGACCTGGCGGCTGCCCATGCACTGGCAGTGGATTATCTACTGGACGGTGGCGAGCGTGCCGCGTTCAACCTGGGCAATGGCCTGGGCTTTTCGGTGCA < 4:341219/149‑1 GACTACGACACGCCGGATGGCACCTGCATACGCGACTACGTGCATGTGGCAGACCTGGCGGCTGCCCATGCACTGGCAGTGGATTATCTACTGGACGGTGGCGAGCGTGCCGCGTTCAACCTGGGCAATGGCCTGGGCTTTTCGGTG > 2:193974/1‑147 GCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGTGCATGGGCAGCCGCCAGGTCTGCCACATGCACGTAGTCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3541927‑3542080‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgcgACTACGACACGCCGGATGGCACCTGCATACGCGACTACGTGCATGTGGCAGACCTGGCGGCTGCCCATGCACTGGCAGTGGATTATCTACTGGACGGTGGCGAGCGTGCCGCGTTCAACCTGGGCAATGGCCTGGGCTTTTCGGTGCA < NC_002947/3542109‑3541962 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |