| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3830125 | 35 (0.580) | 3 (0.050) | 3/248 | NT | 7.1% | coding (1255/1785 nt) | PP_3383 | gluconate 2‑dehydrogenase flavoprotein subunit |
| ? | NC_002947 | = 3830165 | 46 (0.820) | coding (1215/1785 nt) | PP_3383 | gluconate 2‑dehydrogenase flavoprotein subunit | |||||
ATGCGCAGCAGCGGCTGACCGTAGGCATCGCGGTAGGTGGGGTCCAGGTCCAGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3829971‑3830125‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggccggCAGCCGGCCGATTGCCGGTACCTCCAACCCGCCGGGCACTCCGGCCTGGGGCAGTGCCTGGAAGAAAGCCACGGCCGACTACTACACCCACCAGGTGTCGATGGACGCCCACGGCGCACACCAGTCCTACCGTGGCAATTACCTG < NC_002947/3830165‑3830021 ATGCGCAGCAGCGGCTGACCGTAGGCATCGCGGTAGGTGGGGTCCAGGTCCAGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCC > 6:63688/1‑147 GCGCAGCAGCGGCTGACCGTAGGCATCGCGGTAGGTGGGGTCCAGGTCCAGGTAATTGCCACGGTAGGACTTGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCGAGGCACTGCCCC < 5:290064/146‑1 TAGGCATCGCGGTAGGTGGGGTCCAGGTCCAGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCC < 3:288244/126‑1 TAGGCATCGCGGTAGGTGGGGTCCAGGTCCAGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCC > 4:288244/1‑126 GGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGCAGCCGGCCGATTGCCGGTACCTCCAACCCGCCGGGCACTCCGGCC < 5:63688/149‑1 TAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGCAGCCGGCCGATTGCCGGTACCTCCAACCCGCCGGGCACTCCGGCCTG < 3:93245/149‑1 ATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGCAGCCGGCCGATTGCCGGTACCTCCAACCCGCCGGGCACTCCGGCCTGGG < 5:347408/149‑1 AGGCCGGCAGCCGGCCGATTGCCGGTACCTCCAACCCGCCGGGCACTCCGGCCTGGGGCAGTGCCTGGAAGAAAGCCACGGCCGACTACTACACCCACCAGGTGTCGATGGACGCCCACGGCGCACACCAGTCCTACCGTGGCAATTAC < 5:212350/149‑1 GCCGGCAGCCGGCCGATTGCCGGTACCTCCAACCCGCCGGGCACTCCGGCCTGGGGCAGTGCCTGGAAGAAAGCCACGGCCGACTACTACACCCACCAGGTGTCGATGGACGCCCACGGCGCACACCAGTCCTACCGTGGCAATTACCT > 4:174221/1‑149 GCCGGCAGCCGGCCGATTGCCGGTACCTCCAACCCGCCGGGCACTCCGGCCTGGGGCAGTGCCTGGAAGAAAGCCACGGCCGACTACTACACCCACCAGGTGTCGATGGACGCCCACGGCGCACACCAGTCCTACCGTGGCAATTACCT < 7:318707/149‑1 CCGGCAGCCGGCCGATTGCCGGTACCTCCAACCCGCCGGGCACTCCGGCCTGGGGCAGTGCCTGGAAGAAAGCCACGGCCGACTACTACACCCACCAGGTGTCGATGGACGCCCACGGCGCACACCAGTCCTACCGTGGCAATTACCTG > 2:351434/1‑149 ATGCGCAGCAGCGGCTGACCGTAGGCATCGCGGTAGGTGGGGTCCAGGTCCAGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3829971‑3830125‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggccggCAGCCGGCCGATTGCCGGTACCTCCAACCCGCCGGGCACTCCGGCCTGGGGCAGTGCCTGGAAGAAAGCCACGGCCGACTACTACACCCACCAGGTGTCGATGGACGCCCACGGCGCACACCAGTCCTACCGTGGCAATTACCTG < NC_002947/3830165‑3830021 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |