New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3830125	35 (0.580)	3 (0.050)	3/248	NT	7.1%	coding (1255/1785 nt)	PP_3383	gluconate 2‑dehydrogenase flavoprotein subunit
	?	NC_002947	= 3830165	46 (0.820)					coding (1215/1785 nt)	PP_3383	gluconate 2‑dehydrogenase flavoprotein subunit

GCAGCGGCTGACCGTAGGCATCGCGGTAGGTGGGGTCCAGGTCCAGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATCGGCCGGCTGCCGGCCTGGTTCACCCACATTGGCGAACCGCCGACGAAGCCGTGCGGGCCATGGTCGAAGTTGTCGGCGTTGAAATCGTCGATGGCAATGCCATTGCCACCCGCG  >  NC_002947/3829978‑3830270                                                                                                                                                    |                                                                                                                                                  gcagcGGCTGACCGTAGGCATCGCGGTAGGTGGGGTCCAGGTCCAGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGa                                                                                                                                                  <  5:240326/149‑1 (MQ=255)     cGGCTGACCGTAGGCATCGCGGTAGGTGGGGTCCAGGTCCAGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGc                                                                                                                                              <  1:56979/149‑1 (MQ=255)        cTGACCGTAGGCATCGCGGTAGGTGGGGTCCAGGTCCAGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCcg                                                                                                                                           >  2:265255/1‑149 (MQ=255)             cGTAGGCATCGCGGTAGGTGGGGTCCAGGTCCAGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCggg                                                                                                                                      >  3:150863/1‑149 (MQ=255)               tAGGCATCGCGGTAGGTGGGGTCCAGGTCCAGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGtt                                                                                                                                    >  1:351434/1‑149 (MQ=255)                 ggCATCGCGGTAGGTGGGGTCCAGGTCCAGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTgg                                                                                                                                  <  8:159347/149‑1 (MQ=255)                 ggCATCGCGGTAGGTGGGGTCCAGGTCCAGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTg                                                                                                                                   <  8:71882/148‑1 (MQ=255)                 ggCATCGCGGTAGGTGGGGTCCAGGTCCAGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTg                                                                                                                                   <  2:104191/148‑1 (MQ=255)                          gTAGGTGGGGTCCAGGTCCAGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCgg                                                                                                                         <  6:268627/149‑1 (MQ=255)                                ggggTCCAGGTCCAGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCTGCGGGTTGGAGGTACCGGCAATct                                                                                                                   >  3:40294/1‑148 (MQ=255)                                  ggtccaggtccaGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGTAGTGCCCGGCGGGTTGGAGGTACCGGCAATcggc                                                                                                                 <  6:144158/149‑1 (MQ=255)                                   gtccaggtccagGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATcggcc                                                                                                                >  6:206791/1‑149 (MQ=255)                                     ccaggtccaggtAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATcggccgg                                                                                                              <  3:186738/149‑1 (MQ=255)                                            cAGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATCGGCCGGCTGccgg                                                                                                       >  2:351434‑M2/1‑145 (MQ=255)                                             aGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATCGGCCGGCTGccggc                                                                                                      <  7:318707‑M2/149‑6 (MQ=255)                                             aGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATCGGCCGGCTGccggc                                                                                                      >  4:174221‑M2/1‑144 (MQ=255)                                              ggtAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGcagccggccgattgccggtacctccaacccgccgggcactccggcc                                                                                                     <  5:63688‑M1/149‑47 (MQ=255)                                               gtAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTGGAg                                                                                                                                <  6:111152/121‑1 (MQ=255)                                               gtAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTGGAg                                                                                                                                >  5:111152/1‑121 (MQ=255)                                               gTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATCGGCCGGCTGccggcct                                                                                                    <  5:212350‑M2/149‑8 (MQ=255)                                                tAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGcagccggccgattgccggtacctccaacccgccgggcactccggcctg                                                                                                   <  3:93245‑M1/149‑49 (MQ=255)                                                  aTTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGcagccggccgattgccggtacctccaacccgccgggcactccggcctggg                                                                                                 <  5:347408‑M1/149‑51 (MQ=255)                                                       cACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATCGGCCGGCTGCCGGCCTGGTTCAcc                                                                                            <  2:332599/149‑1 (MQ=255)                                                        aCGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATCGGCCGGCTGCCGGCCTGGTTCAcc                                                                                            >  3:151773/1‑148 (MQ=255)                                                              ggACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATCGGCCGGCTGCCGGCCTGGTTCACCCACATTg                                                                                     <  6:197551/149‑1 (MQ=255)                                                                     tgtgCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATCGGCCGGCTGCCGGCCTGGTTCACCCACATTGGCGAAcc                                                                              <  8:318707/149‑1 (MQ=255)                                                                         cgcCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTGGAGGTACAGGCAATCGGCCGGCTGCCGGCCTGGTTCACCCACATTGGCGAAccgcc                                                                           >  6:327040/1‑148 (MQ=255)                                                                           ccGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATCGGCCGGCTGCCGGCCTGGTTCACCCACATTGGCGAACCGCcgac                                                                        <  4:150863/149‑1 (MQ=255)                                                                                   gTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATCGGCCGGCTGCCGGCCTGGTTCACCCACATTGGCGAACCGCCGACGAAGCCGt                                                                >  4:340717/1‑149 (MQ=255)                                                                                                tggtggGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATCGGCCGGCTGCCGGCCTGGTTCACCCACATTGGCGAACCGCCGACGAAGCCGTGCGGGCCATGGTc                                                   >  6:191011/1‑149 (MQ=255)                                                                                                 ggtgggtgTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATCGGCCGGCTGCCGGCCTGGTTCACCCACATTGGCGAACCGCCGACGAAGCCGTGCGGGCCATGGTc                                                   >  5:48655/1‑148 (MQ=255)                                                                                                     ggtgTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATCGGCCGGCTGCCGGCCTGGTTCACCCACATTGGCGAACCGCCGACGAAGCCGTGCGGGCCATGGTCGAAGt                                              >  7:129582/1‑149 (MQ=255)                                                                                                               tCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATCGGCCGGCTGCCGGCCTGGTTCACCCACATTGGCGAACCGCCGACGAAGCCGTGCGGGCCATGGTCGAAGTTGTCGGCGtt                                    >  8:194242/1‑149 (MQ=255)                                                                                                                cGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATCGGCCGGCTGCCGGCCTGGTTCACCCACATTGGCGAACCGCCGACGAAGCCGTGCGGGCCATGGTCGAAGTTGTCGGCGtt                                    <  4:151773/148‑1 (MQ=255)                                                                                                                  gCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTTCCCGGCGGGTTGGTGGTTACGGCAATAGGCCGGCTGCCGGCCTGGTTCACCCCCATTTGCGAACCGCCGACGAAGCCGTGCGGGCCATGGTCGAACTTGTAGGCCTTGa                                  >  1:45794/1‑148 (MQ=255)                                                                                                                  gCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATCGGCCGGCTGCCGGCCTGGTTCACCCACATTGGCGAACCGCCGACGAAGCCGTGCGGGCCATGGTCGAAGTTGTCGGCGTTGaa                                 <  1:265255/149‑1 (MQ=255)                                                                                                                   ccGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATCGGCCGGCTGCCGGCCTGGTTCACCCACATTGGCGAACCGCCGACGAAGCCGTGCGGGCCATGGTCGAAGTTGTCGGCGTTGaaa                                <  5:191011/149‑1 (MQ=255)                                                                                                                       ggCTTTCTTCCAGGCACTGCCCCTGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATCGGCCGGCTGCCGGCCTGGTTCACCCACATTGGCGAACCGCCGACGAAGCCGTGCGGGCCATGGTCGAAGTTGTCGGCGTTGAGAtcgt                            >  4:353166/1‑149 (MQ=255)                                                                                                                         cTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATCGGCCGGCTGCCGGCCTGGTTCACCCACATTGGCGAACCGCCGACGAAGCCGTGCGGGCCATGGTCGAAGTTGTCGGCGTTGAAAtcgtc                           >  1:31155/1‑148 (MQ=255)                                                                                                                            tcttcCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATCGGCCGGCTGCCGGCCTGGTTCACCCACATTGGCGAACCGCCGACGAAGCCGTGCGGGCCATGGTCGAAGTTGTCGGCGTTGAAATCGTCGa                         <  6:48655/147‑1 (MQ=255)                                                                                                                                ccAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATCGGCCGGCTGCCGGCCTGGTTCACCCACATTGGCGAACCGCCGACGAAGCCGTGCGGGCCATGGTCGAAGTTGTCGGCGTTGAAATCGTCGATGGCaa                   >  3:323379/1‑149 (MQ=255)                                                                                                                                    gCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATCGGCCGGCTGCCGGCCTGGTTCACCCACATTGGCGAACCGCCGACGAAGCCGTGCGGGCCATGGTCGAAGTTGTCGGCGTTGAAATCGTCGATGGCAATGc                >  6:89516/1‑148 (MQ=255)                                                                                                                                          ccccAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATCGGCCGGCTGCCGGCCTGGTTCACCCACATTGGCGAACCGCCGACGAAGCCGTGCGGGCCATGGTCGAAGTTGTCGGCGTTGAAATCGTCGATGGCAATGCCATTg           <  6:212350/147‑1 (MQ=255)                                                                                                                                           cccAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATCGGCCGGCTGccggcctggggcagtgcctggaagaaagccacggccgactactacacccaccaggtgtcgatggacgcccacggcgcacaccagtcctaccgtggcaat        <  5:347408‑M2/149‑100 (MQ=255)                                                                                                                                            ccAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATCGGCCGGCTGCCGGCCTGGTTCACCCACATTGGCGAACCGCCGACGAAGCCGTGCGGGCCATGGTCGAAGTTGTCGGCGTTGAAATCGTCGATGGCAATGCCATTGCCAc       <  4:323379/149‑1 (MQ=255)                                                                                                                                             cAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATCGGCCGGCTGccggcctggggcagtgcctggaagaaagccacggccgactactacacccaccaggtgtcgatggacgcccacggcgcacaccagtcctaccgtggcaatta      <  3:93245‑M2/149‑102 (MQ=255)                                                                                                                                              aGGCCGGcagccggccgattgccggtacctccaacccgccgggcactccggcctggggcagtgcctggaagaaagccacggccgactactacacccaccaggtgtcgatggacgcccacggcgcacaccagtcctaccgtggcaattac     <  5:212350‑M1/149‑143 (MQ=255)                                                                                                                                               ggCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATCGGCCGGCTGccggcctggggcagtgcctggaagaaagccacggccgactactacacccaccaggtgtcgatggacgcccacggcgcacaccagtcctaccgtggcaattacc    <  5:63688‑M2/149‑104 (MQ=255)                                                                                                                                                gCCGGcagccggccgattgccggtacctccaacccgccgggcactccggcctggggcagtgcctggaagaaagccacggccgactactacacccaccaggtgtcgatggacgcccacggcgcacaccagtcctaccgtggcaattacct   <  7:318707‑M1/149‑145 (MQ=255)                                                                                                                                                gCCGGcagccggccgattgccggtacctccaacccgccgggcactccggcctggggcagtgcctggaagaaagccacggccgactactacacccaccaggtgtcgatggacgcccacggcgcacaccagtcctaccgtggcaattacct   >  4:174221‑M1/1‑5 (MQ=255)                                                                                                                                                 ccGGcagccggccgattgccggtacctccaacccgccgggcactccggcctggggcagtgcctggaagaaagccacggccgactactacacccaccaggtgtcgatggacgcccacggcgcacaccagtcctaccgtggcaattacctg  >  2:351434‑M1/1‑4 (MQ=255)                                                                                                                                                    |                                                                                                                                                  GCAGCGGCTGACCGTAGGCATCGCGGTAGGTGGGGTCCAGGTCCAGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGAGTGCCCGGCGGGTTGGAGGTACCGGCAATCGGCCGGCTGCCGGCCTGGTTCACCCACATTGGCGAACCGCCGACGAAGCCGTGCGGGCCATGGTCGAAGTTGTCGGCGTTGAAATCGTCGATGGCAATGCCATTGCCACCCGCG  >  NC_002947/3829978‑3830270

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.